RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 BMP8BP34820 402 aa20.93■□□□□ 0.94
CSNK1D-201ENST00000269361 LRRC26Q2I0M4 334 aa20.93■□□□□ 0.94
CSNK1D-201ENST00000269361 LRRFIP1Q32MZ4 808 aaKnown RBP20.93■□□□□ 0.94
CSNK1D-201ENST00000269361 EPB41L4AQ9HCS5 686 aaPredicted RBP20.93■□□□□ 0.94
CSNK1D-201ENST00000269361 VWA5AO00534 786 aa20.92■□□□□ 0.94
CSNK1D-201ENST00000269361 ERC2O15083 957 aa20.92■□□□□ 0.94
CSNK1D-201ENST00000269361 TDO2P48775 406 aa20.92■□□□□ 0.94
CSNK1D-201ENST00000269361 FAM83BQ5T0W9 1011 aa20.92■□□□□ 0.94
CSNK1D-201ENST00000269361 PI4K2BQ8TCG2 481 aa20.92■□□□□ 0.94
CSNK1D-201ENST00000269361 OTUD7AQ8TE49 926 aaPredicted RBP20.92■□□□□ 0.94
CSNK1D-201ENST00000269361 NYAP2Q9P242 653 aa20.92■□□□□ 0.94
CSNK1D-201ENST00000269361 PPP1R9AQ9ULJ8 1098 aa20.92■□□□□ 0.94
CSNK1D-201ENST00000269361 PATL2C9JE40 543 aaKnown RBP20.91■□□□□ 0.94
CSNK1D-201ENST00000269361 RIOX2Q8IUF8 465 aa20.91■□□□□ 0.94
CSNK1D-201ENST00000269361 ROBO3Q96MS0 1386 aa20.91■□□□□ 0.94
CSNK1D-201ENST00000269361 SENP6Q9GZR1 1112 aaPredicted RBP20.91■□□□□ 0.94
CSNK1D-201ENST00000269361 SZT2Q5T011 3432 aa20.91■□□□□ 0.94
CSNK1D-201ENST00000269361 BAZ2AQ9UIF9 1905 aaKnown RBP20.9■□□□□ 0.94
CSNK1D-201ENST00000269361 F5H6K3 240 aa20.9■□□□□ 0.94
CSNK1D-201ENST00000269361 DNM1LO00429 736 aa20.9■□□□□ 0.94
CSNK1D-201ENST00000269361 STAT3P40763 770 aa20.9■□□□□ 0.94
CSNK1D-201ENST00000269361 MAGEA10P43363 369 aaPredicted RBP20.9■□□□□ 0.94
CSNK1D-201ENST00000269361 KLRC3Q07444 240 aa20.9■□□□□ 0.94
CSNK1D-201ENST00000269361 IFNL3Q8IZI9 196 aa20.9■□□□□ 0.94
CSNK1D-201ENST00000269361 ZNF444Q8N0Y2 327 aaPredicted RBP20.9■□□□□ 0.94
CSNK1D-201ENST00000269361 MAML3Q96JK9 1138 aa20.9■□□□□ 0.94
CSNK1D-201ENST00000269361 NUP88Q99567 741 aaPredicted RBP20.9■□□□□ 0.94
CSNK1D-201ENST00000269361 ZNF287Q9HBT7 754 aa20.9■□□□□ 0.94
CSNK1D-201ENST00000269361 RLFQ13129 1914 aa20.89■□□□□ 0.93
CSNK1D-201ENST00000269361 RRP1P56182 461 aaKnown RBP20.89■□□□□ 0.93
CSNK1D-201ENST00000269361 PRAMEF19Q5SWL8 479 aa20.89■□□□□ 0.93
CSNK1D-201ENST00000269361 ARRDC4Q8NCT1 418 aa20.89■□□□□ 0.93
CSNK1D-201ENST00000269361 REPS2Q8NFH8 660 aa20.89■□□□□ 0.93
CSNK1D-201ENST00000269361 SEC62Q99442 399 aaKnown RBP20.89■□□□□ 0.93
CSNK1D-201ENST00000269361 MMP19Q99542 508 aa20.89■□□□□ 0.93
CSNK1D-201ENST00000269361 NACAP1Q9BZK3 213 aa20.89■□□□□ 0.93
CSNK1D-201ENST00000269361 CLIP2Q9UDT6 1046 aa20.89■□□□□ 0.93
CSNK1D-201ENST00000269361 ZNF214Q9UL59 606 aaPredicted RBP20.89■□□□□ 0.93
CSNK1D-201ENST00000269361 A0A0G2JMZ2 1700 aa20.89■□□□□ 0.93
CSNK1D-201ENST00000269361 IGKV6D-41A0A0C4DH26 115 aa20.88■□□□□ 0.93
CSNK1D-201ENST00000269361 SOX1O00570 391 aaPredicted RBP20.88■□□□□ 0.93
CSNK1D-201ENST00000269361 SEPT4O43236 478 aa20.88■□□□□ 0.93
CSNK1D-201ENST00000269361 PRDM1O75626 825 aa20.88■□□□□ 0.93
CSNK1D-201ENST00000269361 MX1P20591 662 aa20.88■□□□□ 0.93
CSNK1D-201ENST00000269361 KCTD2Q14681 263 aa20.88■□□□□ 0.93
CSNK1D-201ENST00000269361 SLF1Q9BQI6 1058 aa20.88■□□□□ 0.93
CSNK1D-201ENST00000269361 FSD1Q9BTV5 496 aa20.88■□□□□ 0.93
CSNK1D-201ENST00000269361 ALPK3Q96L96 1907 aa20.87■□□□□ 0.93
CSNK1D-201ENST00000269361 NDUFB10O96000 172 aa20.87■□□□□ 0.93
CSNK1D-201ENST00000269361 PGK2P07205 417 aa20.87■□□□□ 0.93
CSNK1D-201ENST00000269361 COPB2P35606 906 aa20.87■□□□□ 0.93
CSNK1D-201ENST00000269361 ZMYM1Q5SVZ6 1142 aa20.87■□□□□ 0.93
CSNK1D-201ENST00000269361 GJC2Q5T442 439 aaPredicted RBP20.87■□□□□ 0.93
CSNK1D-201ENST00000269361 ANO1Q5XXA6 986 aa20.87■□□□□ 0.93
CSNK1D-201ENST00000269361 MKL1Q969V6 931 aa20.87■□□□□ 0.93
CSNK1D-201ENST00000269361 ZNF236Q9UL36 1845 aa20.87■□□□□ 0.93
CSNK1D-201ENST00000269361 PRPF38AQ8NAV1 312 aaKnown RBP20.86■□□□□ 0.93
CSNK1D-201ENST00000269361 CEP95Q96GE4 821 aa20.86■□□□□ 0.93
CSNK1D-201ENST00000269361 LRCH3Q96II8 777 aa20.86■□□□□ 0.93
CSNK1D-201ENST00000269361 MTMR4Q9NYA4 1195 aa20.86■□□□□ 0.93
CSNK1D-201ENST00000269361 MYH7P12883 1935 aa20.86■□□□□ 0.93
CSNK1D-201ENST00000269361 ATN1P54259 1190 aaPredicted RBP20.85■□□□□ 0.93
CSNK1D-201ENST00000269361 ZNF792Q3KQV3 632 aa20.85■□□□□ 0.93
CSNK1D-201ENST00000269361 TEX13BQ9BXU2 312 aa20.85■□□□□ 0.93
CSNK1D-201ENST00000269361 UBE2OQ9C0C9 1292 aaKnown RBP20.85■□□□□ 0.93
CSNK1D-201ENST00000269361 NRBP1Q9UHY1 535 aa20.85■□□□□ 0.93
CSNK1D-201ENST00000269361 SYNPO2Q9UMS6 1093 aa20.85■□□□□ 0.93
CSNK1D-201ENST00000269361 DIS3Q9Y2L1 958 aaKnown RBP20.85■□□□□ 0.93
CSNK1D-201ENST00000269361 SALL3Q9BXA9 1300 aa20.84■□□□□ 0.93
CSNK1D-201ENST00000269361 TTLL1O95922 423 aa20.84■□□□□ 0.93
CSNK1D-201ENST00000269361 SLC3A2P08195 630 aaKnown RBP20.84■□□□□ 0.93
CSNK1D-201ENST00000269361 PDE4BQ07343 736 aa20.84■□□□□ 0.93
CSNK1D-201ENST00000269361 ANKRD45Q5TZF3 282 aa20.84■□□□□ 0.93
CSNK1D-201ENST00000269361 TDHQ8IZJ6 230 aa20.84■□□□□ 0.93
CSNK1D-201ENST00000269361 CRBNQ96SW2 442 aa20.84■□□□□ 0.93
CSNK1D-201ENST00000269361 TINF2Q9BSI4 451 aa20.84■□□□□ 0.93
CSNK1D-201ENST00000269361 NAPBQ9H115 298 aa20.84■□□□□ 0.93
CSNK1D-201ENST00000269361 ZBTB47Q9UFB7 747 aaPredicted RBP20.84■□□□□ 0.93
CSNK1D-201ENST00000269361 KBTBD13C9JR72 458 aa20.83■□□□□ 0.93
CSNK1D-201ENST00000269361 ZBED4O75132 1171 aa20.83■□□□□ 0.93
CSNK1D-201ENST00000269361 MYCNP04198 464 aaPredicted RBP20.83■□□□□ 0.93
CSNK1D-201ENST00000269361 PPARAQ07869 468 aa20.83■□□□□ 0.93
CSNK1D-201ENST00000269361 SNRNP48Q6IEG0 339 aaKnown RBP20.83■□□□□ 0.93
CSNK1D-201ENST00000269361 NEDD1Q8NHV4 660 aa20.83■□□□□ 0.93
CSNK1D-201ENST00000269361 MYH8P13535 1937 aa20.82■□□□□ 0.92
CSNK1D-201ENST00000269361 LAMA3Q16787 3333 aa20.82■□□□□ 0.92
CSNK1D-201ENST00000269361 ATP2A1O14983 1001 aa20.82■□□□□ 0.92
CSNK1D-201ENST00000269361 TSPY3P0CV98 308 aa20.82■□□□□ 0.92
CSNK1D-201ENST00000269361 TSPY8P0CW00 308 aa20.82■□□□□ 0.92
CSNK1D-201ENST00000269361 RTP1P59025 263 aa20.82■□□□□ 0.92
CSNK1D-201ENST00000269361 MDM2Q00987 491 aaPredicted RBP20.82■□□□□ 0.92
CSNK1D-201ENST00000269361 LRIT3Q3SXY7 679 aa20.82■□□□□ 0.92
CSNK1D-201ENST00000269361 FAM47AQ5JRC9 791 aa20.82■□□□□ 0.92
CSNK1D-201ENST00000269361 LRRC47Q8N1G4 583 aaKnown RBP20.82■□□□□ 0.92
CSNK1D-201ENST00000269361 GMCL1P1Q8NEA9 526 aa20.82■□□□□ 0.92
CSNK1D-201ENST00000269361 KIFC2Q96AC6 838 aa20.82■□□□□ 0.92
CSNK1D-201ENST00000269361 FEM1BQ9UK73 627 aa20.82■□□□□ 0.92
CSNK1D-201ENST00000269361 RIPK3Q9Y572 518 aa20.82■□□□□ 0.92
CSNK1D-201ENST00000269361 TFAP4Q01664 338 aa20.81■□□□□ 0.92
CSNK1D-201ENST00000269361 LRRC41Q15345 812 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms