RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 HHATQ5VTY9 493 aa11.29□□□□□ -0.6
LAMA3-201ENST00000269217 DENND2CQ68D51 928 aa11.29□□□□□ -0.6
LAMA3-201ENST00000269217 FBXO18Q8NFZ0 1043 aa11.29□□□□□ -0.6
LAMA3-201ENST00000269217 CFAP57Q96MR6 1250 aa11.29□□□□□ -0.6
LAMA3-201ENST00000269217 FANCLQ9NW38 375 aa11.29□□□□□ -0.6
LAMA3-201ENST00000269217 DDX41Q9UJV9 622 aaKnown RBP11.29□□□□□ -0.6
LAMA3-201ENST00000269217 ZYXQ15942 572 aaKnown RBP11.29□□□□□ -0.6
LAMA3-201ENST00000269217 CEP85LQ5SZL2 805 aa11.29□□□□□ -0.6
LAMA3-201ENST00000269217 VSIG1Q86XK7 387 aa11.29□□□□□ -0.6
LAMA3-201ENST00000269217 DESI2Q9BSY9 194 aa11.29□□□□□ -0.6
LAMA3-201ENST00000269217 GPR108Q9NPR9 543 aa11.29□□□□□ -0.6
LAMA3-201ENST00000269217 OR52Z1P0C646 297 aa11.29□□□□□ -0.6
LAMA3-201ENST00000269217 GBP1P32455 592 aa11.29□□□□□ -0.6
LAMA3-201ENST00000269217 NAA25Q14CX7 972 aa11.29□□□□□ -0.6
LAMA3-201ENST00000269217 UBE3CQ15386 1083 aa11.29□□□□□ -0.6
LAMA3-201ENST00000269217 LGSNQ5TDP6 509 aa11.29□□□□□ -0.6
LAMA3-201ENST00000269217 GPBP1Q86WP2 473 aa11.29□□□□□ -0.6
LAMA3-201ENST00000269217 HOOK2Q96ED9 719 aa11.29□□□□□ -0.6
LAMA3-201ENST00000269217 LONRF2Q1L5Z9 754 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 TDRD7Q8NHU6 1098 aaKnown RBP11.28□□□□□ -0.6
LAMA3-201ENST00000269217 MRRFQ96E11 262 aaKnown RBP11.28□□□□□ -0.6
LAMA3-201ENST00000269217 USTQ9Y2C2 406 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 BTBD18B2RXH4 712 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 HSPA2P54652 639 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 GPIHBP1Q8IV16 184 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 CMTR1Q8N1G2 835 aaKnown RBP11.28□□□□□ -0.6
LAMA3-201ENST00000269217 SUPT20HQ8NEM7 779 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 GABPB2Q8TAK5 448 aaPredicted RBP11.28□□□□□ -0.6
LAMA3-201ENST00000269217 ZNF215Q9UL58 517 aaPredicted RBP11.28□□□□□ -0.6
LAMA3-201ENST00000269217 MLH3Q9UHC1 1453 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 TCP1P17987 556 aaKnown RBP11.28□□□□□ -0.6
LAMA3-201ENST00000269217 HSPA1LP34931 641 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 TPD52P55327 224 aaPredicted RBP11.28□□□□□ -0.6
LAMA3-201ENST00000269217 RASA3Q14644 834 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 ARHGAP44Q17R89 818 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 NEK8Q86SG6 692 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 GAS2L3Q86XJ1 694 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 LMNTD2Q8IXW0 634 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 VPS52Q8N1B4 723 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 PNMA1Q8ND90 353 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 CLIC4Q9Y696 253 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 ERVK-7P63135 1459 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 NOP56O00567 594 aaKnown RBP11.28□□□□□ -0.6
LAMA3-201ENST00000269217 CA8P35219 290 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 LONP1P36776 959 aaKnown RBP11.28□□□□□ -0.6
LAMA3-201ENST00000269217 TTLL7Q6ZT98 887 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 U2AF1L4Q8WU68 220 aaKnown RBP11.28□□□□□ -0.6
LAMA3-201ENST00000269217 MYO1AQ9UBC5 1043 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 PCDHB13Q9Y5F0 798 aa11.28□□□□□ -0.6
LAMA3-201ENST00000269217 CIAO1O76071 339 aa11.27□□□□□ -0.6
LAMA3-201ENST00000269217 RPN1P04843 607 aaKnown RBP11.27□□□□□ -0.6
LAMA3-201ENST00000269217 LRRC24Q50LG9 513 aa11.27□□□□□ -0.6
LAMA3-201ENST00000269217 ARHGAP24Q8N264 748 aa11.27□□□□□ -0.6
LAMA3-201ENST00000269217 ZNF521Q96K83 1311 aa11.27□□□□□ -0.6
LAMA3-201ENST00000269217 GAS7O60861 476 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 PPP6R2O75170 966 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 GMNNO75496 209 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 TECP42680 631 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 ZMYM1Q5SVZ6 1142 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 CCDC62Q6P9F0 684 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 TPH2Q8IWU9 490 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 RASEFQ8IZ41 740 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 GOLGA8KD6RF30 607 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 ZNF827Q17R98 1081 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 GKAP1Q5VSY0 366 aaPredicted RBP11.27□□□□□ -0.61
LAMA3-201ENST00000269217 MCUR1Q96AQ8 359 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 CLIC6Q96NY7 704 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 RABEP2Q9H5N1 569 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 MAGEF1Q9HAY2 307 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 ATP7BP35670 1465 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 DAPK3O43293 454 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 KRT15P19012 456 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 CUL4AQ13619 759 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 ADCK5Q3MIX3 580 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 SLFN12Q8IYM2 578 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 GOLGA5Q8TBA6 731 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 SDR42E1Q8WUS8 393 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 AZI2Q9H6S1 392 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 ARMCX3Q9UH62 379 aaPredicted RBP11.27□□□□□ -0.61
LAMA3-201ENST00000269217 PCDHA12Q9UN75 941 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 TTC37Q6PGP7 1564 aa11.27□□□□□ -0.61
LAMA3-201ENST00000269217 BUB1BO60566 1050 aaPredicted RBP11.26□□□□□ -0.61
LAMA3-201ENST00000269217 PCK1P35558 622 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 TCP10Q12799 353 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 SLC39A14Q15043 492 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 CPXCR1Q8N123 301 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 CHURC1Q8WUH1 139 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 MAGI3Q5TCQ9 1506 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 NSMFQ6X4W1 530 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 LMTK3Q96Q04 1460 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 H0YIN7 160 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 N4BP1O75113 896 aaKnown RBP11.26□□□□□ -0.61
LAMA3-201ENST00000269217 CD19P15391 556 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 CTNNA1P35221 906 aaKnown RBP11.26□□□□□ -0.61
LAMA3-201ENST00000269217 ZNF131P52739 623 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 MFSD14BQ5SR56 506 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 PSTPIP2Q9H939 334 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 USP40Q9NVE5 1235 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 KLRF2D3W0D1 207 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 I3L4J1 428 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms