RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 DCAF17Q5H9S7 520 aaPredicted RBP12.85□□□□□ -0.35
VPS33A-201ENST00000267199 FCHSD1Q86WN1 690 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 VSTM4Q8IW00 320 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 UIMC1Q96RL1 719 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 TACO1Q9BSH4 297 aaKnown RBP12.85□□□□□ -0.35
VPS33A-201ENST00000267199 PRKAB2O43741 272 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 CCNT1O60563 726 aaKnown RBP12.85□□□□□ -0.35
VPS33A-201ENST00000267199 MRPS25P82663 173 aaKnown RBP12.85□□□□□ -0.35
VPS33A-201ENST00000267199 NCAPH2Q6IBW4 605 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 RRAGAQ7L523 313 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 ZSCAN10Q96SZ4 725 aaPredicted RBP12.85□□□□□ -0.35
VPS33A-201ENST00000267199 CTNNA2P26232 953 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 EIF6P56537 245 aaKnown RBP12.85□□□□□ -0.35
VPS33A-201ENST00000267199 ST5P78524 1137 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 TRIML1Q8N9V2 468 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 CCDC51Q96ER9 411 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 ZSWIM5Q9P217 1185 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 RASAL2Q9UJF2 1139 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 OVOS2A0A0J9YW53 1432 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 OVOS2Q6IE36 1432 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 GJC1P36383 396 aa12.84□□□□□ -0.35
VPS33A-201ENST00000267199 PTGDRQ13258 359 aa12.84□□□□□ -0.35
VPS33A-201ENST00000267199 MORC3Q14149 939 aa12.84□□□□□ -0.35
VPS33A-201ENST00000267199 SPATA1Q5VX52 437 aa12.84□□□□□ -0.35
VPS33A-201ENST00000267199 DYMQ7RTS9 669 aa12.84□□□□□ -0.35
VPS33A-201ENST00000267199 HAUS4Q9H6D7 363 aa12.84□□□□□ -0.35
VPS33A-201ENST00000267199 BUB1O43683 1085 aa12.84□□□□□ -0.35
VPS33A-201ENST00000267199 CFAP221Q4G0U5 840 aa12.84□□□□□ -0.35
VPS33A-201ENST00000267199 CSRNP2Q9H175 543 aa12.84□□□□□ -0.35
VPS33A-201ENST00000267199 GPCPD1Q9NPB8 672 aa12.84□□□□□ -0.35
VPS33A-201ENST00000267199 SH2B2O14492 632 aaPredicted RBP12.84□□□□□ -0.35
VPS33A-201ENST00000267199 NEBLO76041 1014 aa12.84□□□□□ -0.35
VPS33A-201ENST00000267199 BANK1Q8NDB2 785 aa12.84□□□□□ -0.35
VPS33A-201ENST00000267199 PPP1R1BQ9UD71 204 aaPredicted RBP12.84□□□□□ -0.35
VPS33A-201ENST00000267199 LMBR1Q8WVP7 490 aa12.84□□□□□ -0.35
VPS33A-201ENST00000267199 ZC3H12CQ9C0D7 883 aaKnown RBP12.84□□□□□ -0.35
VPS33A-201ENST00000267199 SEC31BQ9NQW1 1179 aa12.84□□□□□ -0.35
VPS33A-201ENST00000267199 PIK3C2BO00750 1634 aa12.84□□□□□ -0.35
VPS33A-201ENST00000267199 AK9Q5TCS8 1911 aa12.83□□□□□ -0.35
VPS33A-201ENST00000267199 NCAPD2Q15021 1401 aa12.83□□□□□ -0.35
VPS33A-201ENST00000267199 TRIM66O15016 1216 aa12.83□□□□□ -0.35
VPS33A-201ENST00000267199 CHRNDQ07001 517 aa12.83□□□□□ -0.35
VPS33A-201ENST00000267199 NONOQ15233 471 aaKnown RBP eCLIP12.83□□□□□ -0.35
VPS33A-201ENST00000267199 TOGARAM2Q6ZUX3 1019 aa12.83□□□□□ -0.35
VPS33A-201ENST00000267199 NLRP10Q86W26 655 aa12.83□□□□□ -0.35
VPS33A-201ENST00000267199 MAPKAPK5Q8IW41 473 aa12.83□□□□□ -0.35
VPS33A-201ENST00000267199 SYMPKQ92797 1274 aaKnown RBP12.83□□□□□ -0.35
VPS33A-201ENST00000267199 TAF6LQ9Y6J9 622 aa12.83□□□□□ -0.35
VPS33A-201ENST00000267199 DIP2CQ9Y2E4 1556 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 RIMBP2O15034 1052 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 RPS8P62241 208 aaKnown RBP12.83□□□□□ -0.36
VPS33A-201ENST00000267199 LACTBP83111 547 aaPredicted RBP12.83□□□□□ -0.36
VPS33A-201ENST00000267199 ZBTB16Q05516 673 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 STOX1Q6ZVD7 989 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 MICAL1Q8TDZ2 1067 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 ZNF622Q969S3 477 aaKnown RBP eCLIP12.83□□□□□ -0.36
VPS33A-201ENST00000267199 RPGRIP1Q96KN7 1286 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 C8orf37Q96NL8 207 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 REREQ9P2R6 1566 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 CNNM4Q6P4Q7 775 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 STXBP4Q6ZWJ1 553 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 PIH1D3Q9NQM4 214 aaKnown RBP12.83□□□□□ -0.36
VPS33A-201ENST00000267199 CDC42BPGQ6DT37 1551 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 POTEJP0CG39 1038 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 IFNAR1P17181 557 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 IFT88Q13099 833 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 TBC1D5Q92609 795 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 LRRC45Q96CN5 670 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 CARD10Q9BWT7 1032 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 LRWD1Q9UFC0 647 aa12.83□□□□□ -0.36
VPS33A-201ENST00000267199 DLC1Q96QB1 1528 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 WDR17Q8IZU2 1322 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 USP42Q9H9J4 1324 aaKnown RBP12.82□□□□□ -0.36
VPS33A-201ENST00000267199 A6NNZ2 444 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 MCAMP43121 646 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 E2F5Q15329 346 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 TUBB8Q3ZCM7 444 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 SLC9C1Q4G0N8 1177 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 RUFY4Q6ZNE9 571 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 CCDC26Q8TAB7 109 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 SMARCC2Q8TAQ2 1214 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 NUP58Q9BVL2 599 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 PPP1R12CQ9BZL4 782 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 MTRF1LQ9UGC7 380 aaKnown RBP12.82□□□□□ -0.36
VPS33A-201ENST00000267199 SNAP23O00161 211 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 FMNL1O95466 1100 aaPredicted RBP12.82□□□□□ -0.36
VPS33A-201ENST00000267199 PPP1R2P41236 205 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 DAAM2Q86T65 1068 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 CABP7Q86V35 215 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 EFCAB13Q8IY85 973 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 FOXP1Q9H334 677 aaPredicted RBP12.82□□□□□ -0.36
VPS33A-201ENST00000267199 TBC1D7Q9P0N9 293 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 COL3A1P02461 1466 aaPredicted RBP12.82□□□□□ -0.36
VPS33A-201ENST00000267199 CXCR5P32302 372 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 PCK1P35558 622 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 PEX19P40855 299 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 BLIDQ8IZY5 108 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 SYNE4Q8N205 404 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 TTLL11Q8NHH1 800 aa12.82□□□□□ -0.36
VPS33A-201ENST00000267199 WDR66Q8TBY9 1149 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms