RNA–Protein interactions for RNA: ENST00000265073.8

SUB1-201, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUB1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-201ENST00000265073 STX17P56962 302 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 SEPT2Q15019 361 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 LETM2Q2VYF4 491 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 CFAP100Q494V2 611 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 TTC38Q5R3I4 469 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 CCDC186Q7Z3E2 898 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 DGKHQ86XP1 1220 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 RASSF8Q8NHQ8 419 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 FOXP1Q9H334 677 aaPredicted RBP10.06□□□□□ -0.8
SUB1-201ENST00000265073 RBM28Q9NW13 759 aaKnown RBP10.06□□□□□ -0.8
SUB1-201ENST00000265073 GAKO14976 1311 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 STK36Q9NRP7 1315 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 CALM1P0DP23 149 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 CALM2P0DP24 149 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 CALM3P0DP25 149 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 SHMT1P34896 483 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 BAG6P46379 1132 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 GOLGA8FQ08AF8 430 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 GOLGA8DPQ0D2H9 430 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 PFKFB3Q16875 520 aaPredicted RBP10.06□□□□□ -0.8
SUB1-201ENST00000265073 RILPL1Q5EBL4 403 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 SLF2Q8IX21 1173 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 SYMPKQ92797 1274 aaKnown RBP10.06□□□□□ -0.8
SUB1-201ENST00000265073 TRIM34Q9BYJ4 488 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 FAM198AQ9UFP1 575 aa10.06□□□□□ -0.8
SUB1-201ENST00000265073 COL11A2P13942 1736 aaPredicted RBP10.05□□□□□ -0.8
SUB1-201ENST00000265073 SNED1Q8TER0 1413 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 PSMD14O00487 310 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 EGFRP00533 1210 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 PLCG2P16885 1265 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 STX1AQ16623 288 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 UBE2SQ16763 222 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 PRAMEF18Q5VWM3 479 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 TTLL6Q8N841 843 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 TMEM60Q9H2L4 133 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 ECM29Q5VYK3 1845 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 PODNQ7Z5L7 613 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 JMYQ8N9B5 988 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 NEDD1Q8NHV4 660 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 CNKSR1Q969H4 720 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 BRMS1Q9HCU9 246 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 MTMR4Q9NYA4 1195 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 CEP350Q5VT06 3117 aa10.05□□□□□ -0.8
SUB1-201ENST00000265073 CCDC194A0A1B0GVG4 234 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 A0A1W2PQ27 194 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 A0A1W2PQ64 194 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 A0A1W2PQD8 194 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 SMC2O95347 1197 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 RRP1BQ14684 758 aaKnown RBP10.04□□□□□ -0.8
SUB1-201ENST00000265073 IQCB1Q15051 598 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 IL17AQ16552 155 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 DHX40Q8IX18 779 aaKnown RBP10.04□□□□□ -0.8
SUB1-201ENST00000265073 BLIDQ8IZY5 108 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 BCS1LQ9Y276 419 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 SMCO2A6NFE2 343 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 USP17L10C9JJH3 530 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 BMP6P22004 513 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 GRM4Q14833 912 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 CCDC144BQ3MJ40 725 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 DNTTIP2Q5QJE6 756 aaKnown RBP10.04□□□□□ -0.8
SUB1-201ENST00000265073 RESP18Q5W5W9 173 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 PYCARDQ9ULZ3 195 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 TIAM2Q8IVF5 1701 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 PDHBP11177 359 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 DGKZQ13574 1117 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 KARSQ15046 597 aaKnown RBP10.04□□□□□ -0.8
SUB1-201ENST00000265073 USH1GQ495M9 461 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 ATL3Q6DD88 541 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 RBM43Q6ZSC3 357 aaKnown RBP10.04□□□□□ -0.8
SUB1-201ENST00000265073 C7orf43Q8WVR3 580 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 CSRNP1Q96S65 589 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 TMEM39BQ9GZU3 492 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 MYH1P12882 1939 aa10.04□□□□□ -0.8
SUB1-201ENST00000265073 EEF2P13639 858 aaKnown RBP10.03□□□□□ -0.8
SUB1-201ENST00000265073 PTPREP23469 700 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 SLC30A10Q6XR72 485 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 KRBA2Q6ZNG9 492 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 CEP57L1Q8IYX8 460 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 FAM163AQ96GL9 167 aaPredicted RBP10.03□□□□□ -0.8
SUB1-201ENST00000265073 MYH15Q9Y2K3 1946 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 PALM3A6NDB9 673 aaPredicted RBP10.03□□□□□ -0.8
SUB1-201ENST00000265073 CUTAO60888 179 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 GH2P01242 217 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 HLA-DOAP06340 250 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 CERKLQ49MI3 558 aaPredicted RBP10.03□□□□□ -0.8
SUB1-201ENST00000265073 KCNF1Q9H3M0 494 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 ANO10Q9NW15 660 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 ASTN2O75129 1339 aaPredicted RBP10.03□□□□□ -0.8
SUB1-201ENST00000265073 CCNT1O60563 726 aaKnown RBP10.03□□□□□ -0.8
SUB1-201ENST00000265073 PPP6R2O75170 966 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 TOP1P11387 765 aaKnown RBP10.03□□□□□ -0.8
SUB1-201ENST00000265073 KCNA3P22001 575 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 ECE1P42892 770 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 NBPF9Q3BBW0 867 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 STRIP1Q5VSL9 837 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 ZNF287Q9HBT7 754 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 FAM13BQ9NYF5 915 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 CCDC39Q9UFE4 941 aa10.03□□□□□ -0.8
SUB1-201ENST00000265073 SEC63Q9UGP8 760 aaKnown RBP10.03□□□□□ -0.8
SUB1-201ENST00000265073 PCDHA6Q9UN73 950 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms