RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 CABP5Q9NP86 173 aa11.48□□□□□ -0.57
SEC22C-201ENST00000264454 BARHL2Q9NY43 387 aa11.48□□□□□ -0.57
SEC22C-201ENST00000264454 SEC63Q9UGP8 760 aaKnown RBP11.48□□□□□ -0.57
SEC22C-201ENST00000264454 BCS1LQ9Y276 419 aa11.48□□□□□ -0.57
SEC22C-201ENST00000264454 PCDHAC2Q9Y5I4 1007 aa11.48□□□□□ -0.57
SEC22C-201ENST00000264454 TRIM75PA6NK02 468 aa11.47□□□□□ -0.57
SEC22C-201ENST00000264454 NFKBIEO00221 500 aa11.47□□□□□ -0.57
SEC22C-201ENST00000264454 TBC1D12O60347 775 aa11.47□□□□□ -0.57
SEC22C-201ENST00000264454 CAVIN2O95810 425 aa11.47□□□□□ -0.57
SEC22C-201ENST00000264454 TNNI2P48788 182 aa11.47□□□□□ -0.57
SEC22C-201ENST00000264454 CACNB3P54284 484 aa11.47□□□□□ -0.57
SEC22C-201ENST00000264454 NR5A1Q13285 461 aa11.47□□□□□ -0.57
SEC22C-201ENST00000264454 AXDND1Q5T1B0 1012 aaPredicted RBP11.47□□□□□ -0.57
SEC22C-201ENST00000264454 DAGLBQ8NCG7 672 aa11.47□□□□□ -0.57
SEC22C-201ENST00000264454 DPF2Q92785 391 aa11.47□□□□□ -0.57
SEC22C-201ENST00000264454 ZBED3Q96IU2 234 aaPredicted RBP11.47□□□□□ -0.57
SEC22C-201ENST00000264454 CSRNP1Q96S65 589 aa11.47□□□□□ -0.57
SEC22C-201ENST00000264454 PCDHA4Q9UN74 947 aa11.47□□□□□ -0.57
SEC22C-201ENST00000264454 MYH6P13533 1939 aa11.47□□□□□ -0.57
SEC22C-201ENST00000264454 FER1L6Q2WGJ9 1857 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 ADAMTSL1Q8N6G6 1762 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 FAM237AA0A1B0GTK4 181 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 hCG_1642624A0A1W2PR95 340 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 USP17L5A8MUK1 530 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 CYTH3O43739 400 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 GNA11P29992 359 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 TOB1P50616 345 aaPredicted RBP11.46□□□□□ -0.57
SEC22C-201ENST00000264454 EIF6P56537 245 aaKnown RBP11.46□□□□□ -0.57
SEC22C-201ENST00000264454 ZNF280AP59817 542 aaPredicted RBP11.46□□□□□ -0.57
SEC22C-201ENST00000264454 ZNF543Q08ER8 600 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 SNW1Q13573 536 aaKnown RBP11.46□□□□□ -0.57
SEC22C-201ENST00000264454 ABCB5Q2M3G0 1257 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 RBM26Q5T8P6 1007 aaKnown RBP11.46□□□□□ -0.57
SEC22C-201ENST00000264454 USP17L2Q6R6M4 530 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 BLIDQ8IZY5 108 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 FMR1NBQ8N0W7 255 aaPredicted RBP11.46□□□□□ -0.57
SEC22C-201ENST00000264454 KRI1Q8N9T8 703 aaKnown RBP11.46□□□□□ -0.57
SEC22C-201ENST00000264454 ZNF579Q8NAF0 562 aaKnown RBP11.46□□□□□ -0.57
SEC22C-201ENST00000264454 OXER1Q8TDS5 423 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 DCAF4Q8WV16 495 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 TNFRSF25Q93038 417 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 TIGD1Q96MW7 591 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 FUCA2Q9BTY2 467 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 RBSNQ9H1K0 784 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 DNAJC18Q9H819 358 aa11.46□□□□□ -0.57
SEC22C-201ENST00000264454 ZBTB12Q9Y330 459 aaPredicted RBP11.46□□□□□ -0.57
SEC22C-201ENST00000264454 BRCA1P38398 1863 aaKnown RBP11.46□□□□□ -0.58
SEC22C-201ENST00000264454 UTRNP46939 3433 aa11.46□□□□□ -0.58
SEC22C-201ENST00000264454 COL4A5P29400 1685 aa11.46□□□□□ -0.58
SEC22C-201ENST00000264454 ESYT2A0FGR8 921 aa11.45□□□□□ -0.58
SEC22C-201ENST00000264454 TCP10L2B9ZVM9 353 aa11.45□□□□□ -0.58
SEC22C-201ENST00000264454 PTPREP23469 700 aa11.45□□□□□ -0.58
SEC22C-201ENST00000264454 TNFAIP1Q13829 316 aa11.45□□□□□ -0.58
SEC22C-201ENST00000264454 NPY5RQ15761 445 aa11.45□□□□□ -0.58
SEC22C-201ENST00000264454 SASS6Q6UVJ0 657 aa11.45□□□□□ -0.58
SEC22C-201ENST00000264454 SHISA4Q96DD7 197 aa11.45□□□□□ -0.58
SEC22C-201ENST00000264454 ZMYND12Q9H0C1 365 aa11.45□□□□□ -0.58
SEC22C-201ENST00000264454 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.45□□□□□ -0.58
SEC22C-201ENST00000264454 C6orf50Q9HD87 102 aa11.45□□□□□ -0.58
SEC22C-201ENST00000264454 MYOZ2Q9NPC6 264 aa11.45□□□□□ -0.58
SEC22C-201ENST00000264454 MTMR7Q9Y216 660 aa11.45□□□□□ -0.58
SEC22C-201ENST00000264454 SRPRBQ9Y5M8 271 aaKnown RBP11.45□□□□□ -0.58
SEC22C-201ENST00000264454 MYH8P13535 1937 aa11.45□□□□□ -0.58
SEC22C-201ENST00000264454 FZD9O00144 591 aa11.44□□□□□ -0.58
SEC22C-201ENST00000264454 STXBP3O00186 592 aa11.44□□□□□ -0.58
SEC22C-201ENST00000264454 GOLGA8HP0CJ92 632 aa11.44□□□□□ -0.58
SEC22C-201ENST00000264454 EEF2P13639 858 aaKnown RBP11.44□□□□□ -0.58
SEC22C-201ENST00000264454 MARCKSP29966 332 aaPredicted RBP11.44□□□□□ -0.58
SEC22C-201ENST00000264454 ICA1Q05084 483 aa11.44□□□□□ -0.58
SEC22C-201ENST00000264454 CAMK4Q16566 473 aa11.44□□□□□ -0.58
SEC22C-201ENST00000264454 RESP18Q5W5W9 173 aa11.44□□□□□ -0.58
SEC22C-201ENST00000264454 WWC2Q6AWC2 1192 aa11.44□□□□□ -0.58
SEC22C-201ENST00000264454 PPP1R18Q6NYC8 613 aa11.44□□□□□ -0.58
SEC22C-201ENST00000264454 HEATR3Q7Z4Q2 680 aa11.44□□□□□ -0.58
SEC22C-201ENST00000264454 ELOA2Q8IYF1 753 aaPredicted RBP11.44□□□□□ -0.58
SEC22C-201ENST00000264454 LRRC47Q8N1G4 583 aaKnown RBP11.44□□□□□ -0.58
SEC22C-201ENST00000264454 GMCL1P1Q8NEA9 526 aa11.44□□□□□ -0.58
SEC22C-201ENST00000264454 FERMT2Q96AC1 680 aa11.44□□□□□ -0.58
SEC22C-201ENST00000264454 SDF4Q9BRK5 362 aa11.44□□□□□ -0.58
SEC22C-201ENST00000264454 GOLPH3LQ9H4A5 285 aa11.44□□□□□ -0.58
SEC22C-201ENST00000264454 FAM13BQ9NYF5 915 aa11.44□□□□□ -0.58
SEC22C-201ENST00000264454 HPSEQ9Y251 543 aa11.44□□□□□ -0.58
SEC22C-201ENST00000264454 GREB1LQ9C091 1923 aaPredicted RBP11.44□□□□□ -0.58
SEC22C-201ENST00000264454 PNMA6FA0A0J9YX94 578 aa11.43□□□□□ -0.58
SEC22C-201ENST00000264454 CCDC194A0A1B0GVG4 234 aa11.43□□□□□ -0.58
SEC22C-201ENST00000264454 A0A1B0GVL5 298 aa11.43□□□□□ -0.58
SEC22C-201ENST00000264454 CLRN2A0PK11 232 aa11.43□□□□□ -0.58
SEC22C-201ENST00000264454 M0R2N6 131 aa11.43□□□□□ -0.58
SEC22C-201ENST00000264454 WNT10BO00744 389 aa11.43□□□□□ -0.58
SEC22C-201ENST00000264454 ZNF202O95125 648 aa11.43□□□□□ -0.58
SEC22C-201ENST00000264454 NDUFA8P51970 172 aa11.43□□□□□ -0.58
SEC22C-201ENST00000264454 NAPAP54920 295 aa11.43□□□□□ -0.58
SEC22C-201ENST00000264454 ATP2B2Q01814 1243 aa11.43□□□□□ -0.58
SEC22C-201ENST00000264454 MAP3K10Q02779 954 aa11.43□□□□□ -0.58
SEC22C-201ENST00000264454 CCDC173Q0VFZ6 552 aa11.43□□□□□ -0.58
SEC22C-201ENST00000264454 SLC35G1Q2M3R5 365 aa11.43□□□□□ -0.58
SEC22C-201ENST00000264454 TTC38Q5R3I4 469 aa11.43□□□□□ -0.58
SEC22C-201ENST00000264454 KRT25Q7Z3Z0 450 aa11.43□□□□□ -0.58
SEC22C-201ENST00000264454 PIBF1Q8WXW3 757 aa11.43□□□□□ -0.58
SEC22C-201ENST00000264454 GLT8D2Q9H1C3 349 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms