RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 SAMD7Q7Z3H4 446 aa9.57□□□□□ -0.88
COPS4-201ENST00000264389 GPC2Q8N158 579 aa9.57□□□□□ -0.88
COPS4-201ENST00000264389 PHF20Q9BVI0 1012 aa9.57□□□□□ -0.88
COPS4-201ENST00000264389 FTOQ9C0B1 505 aaKnown RBP eCLIP9.57□□□□□ -0.88
COPS4-201ENST00000264389 FOXP1Q9H334 677 aaPredicted RBP9.57□□□□□ -0.88
COPS4-201ENST00000264389 KANSL2Q9H9L4 492 aa9.57□□□□□ -0.88
COPS4-201ENST00000264389 NYAP2Q9P242 653 aa9.57□□□□□ -0.88
COPS4-201ENST00000264389 GOLGB1Q14789 3259 aaKnown RBP9.57□□□□□ -0.88
COPS4-201ENST00000264389 BTBD18B2RXH4 712 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 RAD21O60216 631 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 GH2P01242 217 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 SNHG28P0DPA3 235 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 EEF2P13639 858 aaKnown RBP9.56□□□□□ -0.88
COPS4-201ENST00000264389 STK38Q15208 465 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 SHROOM1Q2M3G4 852 aaPredicted RBP9.56□□□□□ -0.88
COPS4-201ENST00000264389 NOSTRINQ8IVI9 506 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 CCDC148Q8NFR7 591 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 BICD2Q8TD16 824 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 POLR3EQ9NVU0 708 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 RTEL1Q9NZ71 1219 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 SEC63Q9UGP8 760 aaKnown RBP9.56□□□□□ -0.88
COPS4-201ENST00000264389 HACL1Q9UJ83 578 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 ISY1Q9ULR0 285 aaKnown RBP9.56□□□□□ -0.88
COPS4-201ENST00000264389 OTOFQ9HC10 1997 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 CYTH3O43739 400 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 TBC1D12O60347 775 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 YEATS4O95619 227 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 SMARCA1P28370 1054 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 NLRP5P59047 1200 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 ZNF543Q08ER8 600 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 GPATCH4Q5T3I0 446 aaKnown RBP9.56□□□□□ -0.88
COPS4-201ENST00000264389 ANO1Q5XXA6 986 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 HOMER1Q86YM7 354 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 CDAN1Q8IWY9 1227 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 GPKOWQ92917 476 aaPredicted RBP eCLIP9.56□□□□□ -0.88
COPS4-201ENST00000264389 SHISA4Q96DD7 197 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 RRP36Q96EU6 259 aaKnown RBP9.56□□□□□ -0.88
COPS4-201ENST00000264389 SH3GLB2Q9NR46 395 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 RNF181Q9P0P0 153 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 TMEM63CQ9P1W3 806 aa9.56□□□□□ -0.88
COPS4-201ENST00000264389 RBBP6Q7Z6E9 1792 aaKnown RBP9.56□□□□□ -0.88
COPS4-201ENST00000264389 SCN4AP35499 1836 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 PHIPQ8WWQ0 1821 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 hCG_1984214I3L0E3 225 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 PITPNM1O00562 1244 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 YBX3P16989 372 aaKnown RBP eCLIP9.55□□□□□ -0.88
COPS4-201ENST00000264389 CALML3P27482 149 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 NASPP49321 788 aaPredicted RBP9.55□□□□□ -0.88
COPS4-201ENST00000264389 NR5A1Q13285 461 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 RASA3Q14644 834 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 SF3A1Q15459 793 aaKnown RBP9.55□□□□□ -0.88
COPS4-201ENST00000264389 ZSCAN23Q3MJ62 389 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 WWC2Q6AWC2 1192 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 POTEHQ6S545 545 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 HEATR3Q7Z4Q2 680 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 APOBEC3FQ8IUX4 373 aaKnown RBP9.55□□□□□ -0.88
COPS4-201ENST00000264389 ZNF713Q8N859 430 aaPredicted RBP9.55□□□□□ -0.88
COPS4-201ENST00000264389 KCNG4Q8TDN1 519 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 CCDC12Q8WUD4 166 aaPredicted RBP9.55□□□□□ -0.88
COPS4-201ENST00000264389 DCAF4Q8WV16 495 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 SPOCK2Q92563 424 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 MKL1Q969V6 931 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 WDR90Q96KV7 1748 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 CPVLQ9H3G5 476 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 ARHGEF10LQ9HCE6 1279 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 GPCPD1Q9NPB8 672 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 GPRC5DQ9NZD1 345 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 RCOR1Q9UKL0 485 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 ZBTB21Q9ULJ3 1066 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 CLIC4Q9Y696 253 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 PARP14Q460N5 1801 aa9.55□□□□□ -0.88
COPS4-201ENST00000264389 ASTN2O75129 1339 aaPredicted RBP9.54□□□□□ -0.88
COPS4-201ENST00000264389 SPTLC2O15270 562 aa9.54□□□□□ -0.88
COPS4-201ENST00000264389 PRR29P0C7W0 189 aa9.54□□□□□ -0.88
COPS4-201ENST00000264389 LMOD1P29536 600 aaPredicted RBP9.54□□□□□ -0.88
COPS4-201ENST00000264389 SLC1A4P43007 532 aa9.54□□□□□ -0.88
COPS4-201ENST00000264389 ME1P48163 572 aa9.54□□□□□ -0.88
COPS4-201ENST00000264389 RRP1BQ14684 758 aaKnown RBP9.54□□□□□ -0.88
COPS4-201ENST00000264389 SLC35G1Q2M3R5 365 aa9.54□□□□□ -0.88
COPS4-201ENST00000264389 RILPL1Q5EBL4 403 aa9.54□□□□□ -0.88
COPS4-201ENST00000264389 CCDC183Q5T5S1 534 aa9.54□□□□□ -0.88
COPS4-201ENST00000264389 SLFN13Q68D06 897 aa9.54□□□□□ -0.88
COPS4-201ENST00000264389 MIGA2Q7L4E1 593 aa9.54□□□□□ -0.88
COPS4-201ENST00000264389 FAM177A1Q8N128 213 aaPredicted RBP9.54□□□□□ -0.88
COPS4-201ENST00000264389 LINC00301Q8NCQ3 95 aa9.54□□□□□ -0.88
COPS4-201ENST00000264389 OXER1Q8TDS5 423 aa9.54□□□□□ -0.88
COPS4-201ENST00000264389 RIOX1Q9H6W3 641 aa9.54□□□□□ -0.88
COPS4-201ENST00000264389 PGAP2Q9UHJ9 254 aa9.54□□□□□ -0.88
COPS4-201ENST00000264389 NOL7Q9UMY1 257 aaKnown RBP9.54□□□□□ -0.88
COPS4-201ENST00000264389 SCAF8Q9UPN6 1271 aaKnown RBP9.54□□□□□ -0.88
COPS4-201ENST00000264389 PAPPA2Q9BXP8 1791 aa9.54□□□□□ -0.88
COPS4-201ENST00000264389 MYH7BA7E2Y1 1941 aa9.54□□□□□ -0.88
COPS4-201ENST00000264389 STXBP3O00186 592 aa9.53□□□□□ -0.88
COPS4-201ENST00000264389 NAPAP54920 295 aa9.53□□□□□ -0.88
COPS4-201ENST00000264389 ANGEL2Q5VTE6 544 aaKnown RBP9.53□□□□□ -0.88
COPS4-201ENST00000264389 KCTD1Q719H9 257 aa9.53□□□□□ -0.88
COPS4-201ENST00000264389 JMYQ8N9B5 988 aa9.53□□□□□ -0.88
COPS4-201ENST00000264389 GMCL1P1Q8NEA9 526 aa9.53□□□□□ -0.88
COPS4-201ENST00000264389 TRPM4Q8TD43 1214 aa9.53□□□□□ -0.88
COPS4-201ENST00000264389 PGBD1Q96JS3 809 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms