RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 KLRC3Q07444 240 aa19.13■□□□□ 0.65
USE1-201ENST00000263897 CACNB2Q08289 660 aaPredicted RBP19.13■□□□□ 0.65
USE1-201ENST00000263897 GRB14Q14449 540 aa19.13■□□□□ 0.65
USE1-201ENST00000263897 PLS1Q14651 629 aa19.13■□□□□ 0.65
USE1-201ENST00000263897 ALX1Q15699 326 aa19.13■□□□□ 0.65
USE1-201ENST00000263897 MCMDC2Q4G0Z9 681 aa19.13■□□□□ 0.65
USE1-201ENST00000263897 FAM83BQ5T0W9 1011 aa19.13■□□□□ 0.65
USE1-201ENST00000263897 VPS53Q5VIR6 699 aa19.13■□□□□ 0.65
USE1-201ENST00000263897 SAMD1Q6SPF0 538 aaPredicted RBP19.13■□□□□ 0.65
USE1-201ENST00000263897 RILPL2Q969X0 211 aa19.13■□□□□ 0.65
USE1-201ENST00000263897 CEP95Q96GE4 821 aa19.13■□□□□ 0.65
USE1-201ENST00000263897 FAM227BQ96M60 508 aa19.13■□□□□ 0.65
USE1-201ENST00000263897 FBXO28Q9NVF7 368 aa19.13■□□□□ 0.65
USE1-201ENST00000263897 MROH8Q9H579 483 aa19.12■□□□□ 0.65
USE1-201ENST00000263897 PPP1R9AQ9ULJ8 1098 aa19.12■□□□□ 0.65
USE1-201ENST00000263897 MKI67P46013 3256 aaKnown RBP19.12■□□□□ 0.65
USE1-201ENST00000263897 PARP14Q460N5 1801 aa19.11■□□□□ 0.65
USE1-201ENST00000263897 A0A0D9SFI3 127 aa19.11■□□□□ 0.65
USE1-201ENST00000263897 VWA5AO00534 786 aa19.11■□□□□ 0.65
USE1-201ENST00000263897 TSPY3P0CV98 308 aa19.11■□□□□ 0.65
USE1-201ENST00000263897 TSPY8P0CW00 308 aa19.11■□□□□ 0.65
USE1-201ENST00000263897 TFAP4Q01664 338 aa19.11■□□□□ 0.65
USE1-201ENST00000263897 CTDSPL2Q05D32 466 aa19.11■□□□□ 0.65
USE1-201ENST00000263897 NMIQ13287 307 aaPredicted RBP19.11■□□□□ 0.65
USE1-201ENST00000263897 TMEM132BQ14DG7 1078 aa19.11■□□□□ 0.65
USE1-201ENST00000263897 FAM47AQ5JRC9 791 aa19.11■□□□□ 0.65
USE1-201ENST00000263897 NPLOC4Q8TAT6 608 aa19.11■□□□□ 0.65
USE1-201ENST00000263897 DPF3Q92784 378 aa19.11■□□□□ 0.65
USE1-201ENST00000263897 NUP88Q99567 741 aaPredicted RBP19.11■□□□□ 0.65
USE1-201ENST00000263897 HTATIP2Q9BUP3 242 aa19.11■□□□□ 0.65
USE1-201ENST00000263897 ANAPC4Q9UJX5 808 aa19.11■□□□□ 0.65
USE1-201ENST00000263897 SYNPO2Q9UMS6 1093 aa19.11■□□□□ 0.65
USE1-201ENST00000263897 A0A0G2JMZ2 1700 aa19.11■□□□□ 0.65
USE1-201ENST00000263897 MYH4Q9Y623 1939 aa19.1■□□□□ 0.65
USE1-201ENST00000263897 TTLL1O95922 423 aa19.1■□□□□ 0.65
USE1-201ENST00000263897 NDUFB10O96000 172 aa19.1■□□□□ 0.65
USE1-201ENST00000263897 FGAP02671 866 aa19.1■□□□□ 0.65
USE1-201ENST00000263897 MFSD14CQ5VZR4 134 aa19.1■□□□□ 0.65
USE1-201ENST00000263897 DPP9Q86TI2 863 aa19.1■□□□□ 0.65
USE1-201ENST00000263897 NCAPG2Q86XI2 1143 aa19.1■□□□□ 0.65
USE1-201ENST00000263897 ANKLE1Q8NAG6 615 aa19.1■□□□□ 0.65
USE1-201ENST00000263897 INCENPQ9NQS7 918 aa19.1■□□□□ 0.65
USE1-201ENST00000263897 FLRT1Q9NZU1 646 aa19.1■□□□□ 0.65
USE1-201ENST00000263897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.1■□□□□ 0.65
USE1-201ENST00000263897 PLIN4Q96Q06 1357 aa19.09■□□□□ 0.65
USE1-201ENST00000263897 SLC25A27O95847 323 aa19.09■□□□□ 0.65
USE1-201ENST00000263897 SDSP20132 328 aa19.09■□□□□ 0.65
USE1-201ENST00000263897 ADORA2AP29274 412 aa19.09■□□□□ 0.65
USE1-201ENST00000263897 STAT3P40763 770 aa19.09■□□□□ 0.65
USE1-201ENST00000263897 ABRAQ8N0Z2 381 aa19.09■□□□□ 0.65
USE1-201ENST00000263897 PRPF38AQ8NAV1 312 aaKnown RBP19.09■□□□□ 0.65
USE1-201ENST00000263897 PAWRQ96IZ0 340 aaKnown RBP19.09■□□□□ 0.65
USE1-201ENST00000263897 TACC3Q9Y6A5 838 aa19.09■□□□□ 0.65
USE1-201ENST00000263897 ZNFX1Q9P2E3 1918 aaKnown RBP19.09■□□□□ 0.65
USE1-201ENST00000263897 COBLO75128 1261 aa19.08■□□□□ 0.64
USE1-201ENST00000263897 IGHA2P01877 340 aa19.08■□□□□ 0.64
USE1-201ENST00000263897 FGRP09769 529 aa19.08■□□□□ 0.64
USE1-201ENST00000263897 HSPD1P10809 573 aaKnown RBP19.08■□□□□ 0.64
USE1-201ENST00000263897 CCND3P30281 292 aaPredicted RBP19.08■□□□□ 0.64
USE1-201ENST00000263897 ZNF589Q86UQ0 364 aaPredicted RBP19.08■□□□□ 0.64
USE1-201ENST00000263897 RIOX2Q8IUF8 465 aa19.08■□□□□ 0.64
USE1-201ENST00000263897 GMCL1P1Q8NEA9 526 aa19.08■□□□□ 0.64
USE1-201ENST00000263897 REPS2Q8NFH8 660 aa19.08■□□□□ 0.64
USE1-201ENST00000263897 SLF1Q9BQI6 1058 aa19.08■□□□□ 0.64
USE1-201ENST00000263897 OGDHLQ9ULD0 1010 aa19.08■□□□□ 0.64
USE1-201ENST00000263897 COL11A1P12107 1806 aaPredicted RBP19.08■□□□□ 0.64
USE1-201ENST00000263897 FCER1AP12319 257 aa19.07■□□□□ 0.64
USE1-201ENST00000263897 IRX6P78412 446 aaPredicted RBP19.07■□□□□ 0.64
USE1-201ENST00000263897 PPP4R3BQ5MIZ7 849 aa19.07■□□□□ 0.64
USE1-201ENST00000263897 LHX8Q68G74 356 aa19.07■□□□□ 0.64
USE1-201ENST00000263897 NECAB2Q7Z6G3 386 aa19.07■□□□□ 0.64
USE1-201ENST00000263897 SLC5A4Q9NY91 659 aa19.07■□□□□ 0.64
USE1-201ENST00000263897 ZNF214Q9UL59 606 aaPredicted RBP19.07■□□□□ 0.64
USE1-201ENST00000263897 CCDC171Q6TFL3 1326 aa19.06■□□□□ 0.64
USE1-201ENST00000263897 TSPY2A6NKD2 308 aa19.06■□□□□ 0.64
USE1-201ENST00000263897 H0YGN5 161 aa19.06■□□□□ 0.64
USE1-201ENST00000263897 ORC4O43929 436 aa19.06■□□□□ 0.64
USE1-201ENST00000263897 CYP2C19P33261 490 aa19.06■□□□□ 0.64
USE1-201ENST00000263897 MNX1P50219 401 aaPredicted RBP19.06■□□□□ 0.64
USE1-201ENST00000263897 OLFML2BQ68BL8 750 aa19.06■□□□□ 0.64
USE1-201ENST00000263897 SLFN13Q68D06 897 aa19.06■□□□□ 0.64
USE1-201ENST00000263897 LRRC47Q8N1G4 583 aaKnown RBP19.06■□□□□ 0.64
USE1-201ENST00000263897 DIS3LQ8TF46 1054 aaKnown RBP19.06■□□□□ 0.64
USE1-201ENST00000263897 IL17RBQ9NRM6 502 aa19.06■□□□□ 0.64
USE1-201ENST00000263897 FEM1BQ9UK73 627 aa19.06■□□□□ 0.64
USE1-201ENST00000263897 RANBP6O60518 1105 aaKnown RBP19.05■□□□□ 0.64
USE1-201ENST00000263897 COPB2P35606 906 aa19.05■□□□□ 0.64
USE1-201ENST00000263897 MFAP1P55081 439 aaKnown RBP19.05■□□□□ 0.64
USE1-201ENST00000263897 NBPF3Q9H094 633 aa19.05■□□□□ 0.64
USE1-201ENST00000263897 ZNF236Q9UL36 1845 aa19.04■□□□□ 0.64
USE1-201ENST00000263897 ZMYM6O95789 1325 aa19.04■□□□□ 0.64
USE1-201ENST00000263897 ZBED4O75132 1171 aa19.04■□□□□ 0.64
USE1-201ENST00000263897 BMP3P12645 472 aa19.04■□□□□ 0.64
USE1-201ENST00000263897 STX8Q9UNK0 236 aa19.04■□□□□ 0.64
USE1-201ENST00000263897 NR2E3Q9Y5X4 410 aa19.04■□□□□ 0.64
USE1-201ENST00000263897 HIP1O00291 1037 aa19.03■□□□□ 0.64
USE1-201ENST00000263897 ATP2A1O14983 1001 aa19.03■□□□□ 0.64
USE1-201ENST00000263897 NMT2O60551 498 aa19.03■□□□□ 0.64
USE1-201ENST00000263897 PDE4AP27815 886 aa19.03■□□□□ 0.64
USE1-201ENST00000263897 KCTD2Q14681 263 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms