RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 CARD10Q9BWT7 1032 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 RSPH14Q9UHP6 348 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 MYH2Q9UKX2 1941 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 MACROD2A1Z1Q3 448 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 CYP19A1P11511 503 aaPredicted RBP13.97□□□□□ -0.17
CHMP3-201ENST00000263856 FGFR2P21802 821 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 MATR3P43243 847 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHMP3-201ENST00000263856 BRINP3Q76B58 766 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 RIN2Q8WYP3 895 aaPredicted RBP13.97□□□□□ -0.17
CHMP3-201ENST00000263856 NIP7Q9Y221 180 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHMP3-201ENST00000263856 CDKAL1Q5VV42 579 aa13.96□□□□□ -0.17
CHMP3-201ENST00000263856 PLCD3Q8N3E9 789 aa13.96□□□□□ -0.17
CHMP3-201ENST00000263856 ZNF512BQ96KM6 892 aaPredicted RBP13.96□□□□□ -0.17
CHMP3-201ENST00000263856 PHF20Q9BVI0 1012 aa13.96□□□□□ -0.17
CHMP3-201ENST00000263856 BTG4Q9NY30 223 aa13.96□□□□□ -0.17
CHMP3-201ENST00000263856 ATRNO75882 1429 aa13.96□□□□□ -0.17
CHMP3-201ENST00000263856 PRCPP42785 496 aa13.96□□□□□ -0.17
CHMP3-201ENST00000263856 CCDC148Q8NFR7 591 aa13.96□□□□□ -0.17
CHMP3-201ENST00000263856 FERMT2Q96AC1 680 aa13.96□□□□□ -0.17
CHMP3-201ENST00000263856 GNL3LQ9NVN8 582 aaKnown RBP13.96□□□□□ -0.17
CHMP3-201ENST00000263856 COL18A1P39060 1754 aa13.96□□□□□ -0.18
CHMP3-201ENST00000263856 TTC26A0AVF1 554 aa13.95□□□□□ -0.18
CHMP3-201ENST00000263856 TSPY2A6NKD2 308 aa13.95□□□□□ -0.18
CHMP3-201ENST00000263856 DNA2P51530 1060 aa13.95□□□□□ -0.18
CHMP3-201ENST00000263856 TCP11X2Q5H9J9 407 aa13.95□□□□□ -0.18
CHMP3-201ENST00000263856 CCDC24Q8N4L8 307 aa13.95□□□□□ -0.18
CHMP3-201ENST00000263856 JADE2Q9NQC1 790 aa13.95□□□□□ -0.18
CHMP3-201ENST00000263856 FEZ2Q9UHY8 353 aaPredicted RBP13.95□□□□□ -0.18
CHMP3-201ENST00000263856 EPN1Q9Y6I3 576 aaPredicted RBP13.95□□□□□ -0.18
CHMP3-201ENST00000263856 CHD4Q14839 1912 aa13.95□□□□□ -0.18
CHMP3-201ENST00000263856 LMTK3Q96Q04 1460 aa13.95□□□□□ -0.18
CHMP3-201ENST00000263856 RPN1P04843 607 aaKnown RBP13.95□□□□□ -0.18
CHMP3-201ENST00000263856 CYP2D6P10635 497 aa13.95□□□□□ -0.18
CHMP3-201ENST00000263856 TRIM21P19474 475 aaKnown RBP13.95□□□□□ -0.18
CHMP3-201ENST00000263856 NKX1-1Q15270 411 aaPredicted RBP13.95□□□□□ -0.18
CHMP3-201ENST00000263856 SRBD1Q8N5C6 995 aaKnown RBP13.95□□□□□ -0.18
CHMP3-201ENST00000263856 MAGEC2Q9UBF1 373 aaPredicted RBP13.95□□□□□ -0.18
CHMP3-201ENST00000263856 LUC7L2Q9Y383 392 aaKnown RBP13.95□□□□□ -0.18
CHMP3-201ENST00000263856 LRRIQ3A6PVS8 624 aaPredicted RBP13.95□□□□□ -0.18
CHMP3-201ENST00000263856 MYO1CO00159 1063 aa13.95□□□□□ -0.18
CHMP3-201ENST00000263856 IPO7O95373 1038 aaKnown RBP13.95□□□□□ -0.18
CHMP3-201ENST00000263856 PIP4K2BP78356 416 aa13.95□□□□□ -0.18
CHMP3-201ENST00000263856 SEC23AQ15436 765 aa13.95□□□□□ -0.18
CHMP3-201ENST00000263856 CCDC152Q4G0S7 254 aa13.95□□□□□ -0.18
CHMP3-201ENST00000263856 SPATA20Q8TB22 786 aa13.95□□□□□ -0.18
CHMP3-201ENST00000263856 FAM204AQ9H8W3 233 aa13.95□□□□□ -0.18
CHMP3-201ENST00000263856 PKD1L3Q7Z443 1732 aa13.94□□□□□ -0.18
CHMP3-201ENST00000263856 B4DLN1 442 aa13.94□□□□□ -0.18
CHMP3-201ENST00000263856 POTEB2H3BUK9 544 aa13.94□□□□□ -0.18
CHMP3-201ENST00000263856 NDUFA10O95299 355 aa13.94□□□□□ -0.18
CHMP3-201ENST00000263856 ATP1A1P05023 1023 aaKnown RBP13.94□□□□□ -0.18
CHMP3-201ENST00000263856 PARP1P09874 1014 aaKnown RBP13.94□□□□□ -0.18
CHMP3-201ENST00000263856 ACTN2P35609 894 aa13.94□□□□□ -0.18
CHMP3-201ENST00000263856 KLK7P49862 253 aa13.94□□□□□ -0.18
CHMP3-201ENST00000263856 CYP27A1Q02318 531 aa13.94□□□□□ -0.18
CHMP3-201ENST00000263856 EXOC4Q96A65 974 aa13.94□□□□□ -0.18
CHMP3-201ENST00000263856 ZNF185O15231 689 aa13.94□□□□□ -0.18
CHMP3-201ENST00000263856 CCDC178Q5BJE1 867 aa13.94□□□□□ -0.18
CHMP3-201ENST00000263856 MTRQ99707 1265 aa13.94□□□□□ -0.18
CHMP3-201ENST00000263856 UBXN6Q9BZV1 441 aa13.94□□□□□ -0.18
CHMP3-201ENST00000263856 PRPF3O43395 683 aaKnown RBP13.93□□□□□ -0.18
CHMP3-201ENST00000263856 PBX1P40424 430 aa13.93□□□□□ -0.18
CHMP3-201ENST00000263856 PMS1P54277 932 aaKnown RBP13.93□□□□□ -0.18
CHMP3-201ENST00000263856 SMIM5Q71RC9 77 aa13.93□□□□□ -0.18
CHMP3-201ENST00000263856 GOLGA5Q8TBA6 731 aa13.93□□□□□ -0.18
CHMP3-201ENST00000263856 L1RE1Q9UN81 338 aa13.93□□□□□ -0.18
CHMP3-201ENST00000263856 MAP2K7O14733 419 aa13.93□□□□□ -0.18
CHMP3-201ENST00000263856 ARHGAP25P42331 645 aa13.93□□□□□ -0.18
CHMP3-201ENST00000263856 MMS19Q96T76 1030 aa13.93□□□□□ -0.18
CHMP3-201ENST00000263856 RASSF4Q9H2L5 321 aa13.93□□□□□ -0.18
CHMP3-201ENST00000263856 TFCP2L1Q9NZI6 479 aa13.93□□□□□ -0.18
CHMP3-201ENST00000263856 RRP15Q9Y3B9 282 aaKnown RBP13.93□□□□□ -0.18
CHMP3-201ENST00000263856 BAZ2AQ9UIF9 1905 aaKnown RBP13.93□□□□□ -0.18
CHMP3-201ENST00000263856 COL5A2P05997 1499 aaPredicted RBP13.93□□□□□ -0.18
CHMP3-201ENST00000263856 PPARDQ03181 441 aa13.93□□□□□ -0.18
CHMP3-201ENST00000263856 IL17AQ16552 155 aa13.93□□□□□ -0.18
CHMP3-201ENST00000263856 ELOA2Q8IYF1 753 aaPredicted RBP13.93□□□□□ -0.18
CHMP3-201ENST00000263856 GBP3Q9H0R5 595 aa13.93□□□□□ -0.18
CHMP3-201ENST00000263856 ACBD3Q9H3P7 528 aa13.93□□□□□ -0.18
CHMP3-201ENST00000263856 CCDC194A0A1B0GVG4 234 aa13.92□□□□□ -0.18
CHMP3-201ENST00000263856 GTPBP6O43824 516 aaPredicted RBP13.92□□□□□ -0.18
CHMP3-201ENST00000263856 SCG2P13521 617 aa13.92□□□□□ -0.18
CHMP3-201ENST00000263856 UBA7P41226 1012 aa13.92□□□□□ -0.18
CHMP3-201ENST00000263856 SPAG1Q07617 926 aa13.92□□□□□ -0.18
CHMP3-201ENST00000263856 WHAMMP3Q1A5X7 153 aa13.92□□□□□ -0.18
CHMP3-201ENST00000263856 DNAJC21Q5F1R6 531 aaKnown RBP13.92□□□□□ -0.18
CHMP3-201ENST00000263856 SH3RF1Q7Z6J0 888 aa13.92□□□□□ -0.18
CHMP3-201ENST00000263856 CPVLQ9H3G5 476 aa13.92□□□□□ -0.18
CHMP3-201ENST00000263856 AGPAT5Q9NUQ2 364 aa13.92□□□□□ -0.18
CHMP3-201ENST00000263856 RWDD2AQ9UIY3 292 aa13.92□□□□□ -0.18
CHMP3-201ENST00000263856 DUSP10Q9Y6W6 482 aa13.92□□□□□ -0.18
CHMP3-201ENST00000263856 PNPLA7Q6ZV29 1317 aa13.92□□□□□ -0.18
CHMP3-201ENST00000263856 ATP6V1AP38606 617 aa13.92□□□□□ -0.18
CHMP3-201ENST00000263856 MTIF2P46199 727 aaKnown RBP13.92□□□□□ -0.18
CHMP3-201ENST00000263856 ATP2C1P98194 919 aaPredicted RBP13.92□□□□□ -0.18
CHMP3-201ENST00000263856 C2orf54Q08AI8 447 aa13.92□□□□□ -0.18
CHMP3-201ENST00000263856 TMTC3Q6ZXV5 915 aa13.92□□□□□ -0.18
CHMP3-201ENST00000263856 HEATR3Q7Z4Q2 680 aa13.92□□□□□ -0.18
CHMP3-201ENST00000263856 SMCR8Q8TEV9 937 aaPredicted RBP13.92□□□□□ -0.18
CHMP3-201ENST00000263856 JAKMIP2Q96AA8 810 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms