RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 GPATCH4Q5T3I0 446 aaKnown RBP26.28■■□□□ 1.8
UFD1-201ENST00000263202 OTUD7BQ6GQQ9 843 aa26.28■■□□□ 1.8
UFD1-201ENST00000263202 CLEC17AQ6ZS10 378 aa26.28■■□□□ 1.8
UFD1-201ENST00000263202 SCYL3Q8IZE3 742 aa26.28■■□□□ 1.8
UFD1-201ENST00000263202 CDCA5Q96FF9 252 aa26.28■■□□□ 1.8
UFD1-201ENST00000263202 CPVLQ9H3G5 476 aa26.28■■□□□ 1.8
UFD1-201ENST00000263202 RAD21O60216 631 aa26.27■■□□□ 1.8
UFD1-201ENST00000263202 NDUFB10O96000 172 aa26.27■■□□□ 1.8
UFD1-201ENST00000263202 POTEIP0CG38 1075 aa26.27■■□□□ 1.8
UFD1-201ENST00000263202 POTEJP0CG39 1038 aa26.27■■□□□ 1.8
UFD1-201ENST00000263202 ZKSCAN4Q969J2 545 aaPredicted RBP26.27■■□□□ 1.8
UFD1-201ENST00000263202 GMCL1Q96IK5 515 aa26.27■■□□□ 1.8
UFD1-201ENST00000263202 GLIS2Q9BZE0 524 aaPredicted RBP26.27■■□□□ 1.8
UFD1-201ENST00000263202 GPCPD1Q9NPB8 672 aa26.27■■□□□ 1.8
UFD1-201ENST00000263202 MYH15Q9Y2K3 1946 aa26.26■■□□□ 1.8
UFD1-201ENST00000263202 CCDC96Q2M329 555 aa26.26■■□□□ 1.79
UFD1-201ENST00000263202 RBM27Q9P2N5 1060 aaKnown RBP26.26■■□□□ 1.79
UFD1-201ENST00000263202 CLEC11AQ9Y240 323 aa26.26■■□□□ 1.79
UFD1-201ENST00000263202 SLC1A4P43007 532 aa26.25■■□□□ 1.79
UFD1-201ENST00000263202 PRKG1Q13976 671 aa26.25■■□□□ 1.79
UFD1-201ENST00000263202 KCTD1Q719H9 257 aa26.25■■□□□ 1.79
UFD1-201ENST00000263202 FERMT3Q86UX7 667 aa26.25■■□□□ 1.79
UFD1-201ENST00000263202 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.25■■□□□ 1.79
UFD1-201ENST00000263202 UBA5Q9GZZ9 404 aa26.25■■□□□ 1.79
UFD1-201ENST00000263202 SH2D4AQ9H788 454 aa26.25■■□□□ 1.79
UFD1-201ENST00000263202 TCHHQ07283 1943 aa26.25■■□□□ 1.79
UFD1-201ENST00000263202 KRT40Q6A162 431 aa26.25■■□□□ 1.79
UFD1-201ENST00000263202 PIBF1Q8WXW3 757 aa26.25■■□□□ 1.79
UFD1-201ENST00000263202 RIOX1Q9H6W3 641 aa26.25■■□□□ 1.79
UFD1-201ENST00000263202 GOPCQ9HD26 462 aa26.25■■□□□ 1.79
UFD1-201ENST00000263202 PFKFB3Q16875 520 aaPredicted RBP26.24■■□□□ 1.79
UFD1-201ENST00000263202 NOL9Q5SY16 702 aaKnown RBP26.24■■□□□ 1.79
UFD1-201ENST00000263202 TTBK2Q6IQ55 1244 aa26.24■■□□□ 1.79
UFD1-201ENST00000263202 BAG4O95429 457 aaKnown RBP26.23■■□□□ 1.79
UFD1-201ENST00000263202 SCG2P13521 617 aa26.23■■□□□ 1.79
UFD1-201ENST00000263202 RESTQ13127 1097 aa26.23■■□□□ 1.79
UFD1-201ENST00000263202 TRIM29Q14134 588 aa26.23■■□□□ 1.79
UFD1-201ENST00000263202 KIAA1755Q5JYT7 1200 aa26.23■■□□□ 1.79
UFD1-201ENST00000263202 GBP4Q96PP9 640 aa26.23■■□□□ 1.79
UFD1-201ENST00000263202 VCPKMTQ9H867 229 aa26.23■■□□□ 1.79
UFD1-201ENST00000263202 PPP1R12BO60237 982 aaPredicted RBP26.23■■□□□ 1.79
UFD1-201ENST00000263202 PTPRAP18433 802 aa26.23■■□□□ 1.79
UFD1-201ENST00000263202 NUP88Q99567 741 aaPredicted RBP26.23■■□□□ 1.79
UFD1-201ENST00000263202 PICK1Q9NRD5 415 aa26.23■■□□□ 1.79
UFD1-201ENST00000263202 NF2P35240 595 aa26.22■■□□□ 1.79
UFD1-201ENST00000263202 NFKBIBQ15653 356 aa26.22■■□□□ 1.79
UFD1-201ENST00000263202 SHISA4Q96DD7 197 aa26.22■■□□□ 1.79
UFD1-201ENST00000263202 CHAMP1Q96JM3 812 aa26.22■■□□□ 1.79
UFD1-201ENST00000263202 ZSCAN16Q9H4T2 348 aaPredicted RBP26.22■■□□□ 1.79
UFD1-201ENST00000263202 BMP3P12645 472 aa26.21■■□□□ 1.79
UFD1-201ENST00000263202 ZYXQ15942 572 aaKnown RBP26.21■■□□□ 1.79
UFD1-201ENST00000263202 MAP1SQ66K74 1059 aaPredicted RBP26.21■■□□□ 1.79
UFD1-201ENST00000263202 MCTP1Q6DN14 999 aa26.21■■□□□ 1.79
UFD1-201ENST00000263202 SPICE1Q8N0Z3 855 aa26.21■■□□□ 1.79
UFD1-201ENST00000263202 VAT1LQ9HCJ6 419 aa26.21■■□□□ 1.79
UFD1-201ENST00000263202 VPS54Q9P1Q0 977 aa26.21■■□□□ 1.79
UFD1-201ENST00000263202 ATP6V1DQ9Y5K8 247 aa26.21■■□□□ 1.79
UFD1-201ENST00000263202 SLC16A2P36021 539 aa26.21■■□□□ 1.79
UFD1-201ENST00000263202 MAP3K9P80192 1104 aa26.21■■□□□ 1.79
UFD1-201ENST00000263202 FOXD4L6Q3SYB3 417 aaPredicted RBP26.21■■□□□ 1.79
UFD1-201ENST00000263202 FOXD4L3Q6VB84 417 aaPredicted RBP26.21■■□□□ 1.79
UFD1-201ENST00000263202 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.21■■□□□ 1.79
UFD1-201ENST00000263202 ADGRF4Q8IZF3 695 aa26.21■■□□□ 1.79
UFD1-201ENST00000263202 RRP36Q96EU6 259 aaKnown RBP26.21■■□□□ 1.79
UFD1-201ENST00000263202 FEZ1Q99689 392 aa26.21■■□□□ 1.79
UFD1-201ENST00000263202 WDR18Q9BV38 432 aa26.21■■□□□ 1.79
UFD1-201ENST00000263202 KIAA1683Q9H0B3 1180 aa26.21■■□□□ 1.79
UFD1-201ENST00000263202 NMRK2Q9NPI5 230 aa26.21■■□□□ 1.79
UFD1-201ENST00000263202 ISY1Q9ULR0 285 aaKnown RBP26.21■■□□□ 1.79
UFD1-201ENST00000263202 XBP1P17861 261 aa26.2■■□□□ 1.78
UFD1-201ENST00000263202 KCNJ14Q9UNX9 436 aa26.2■■□□□ 1.78
UFD1-201ENST00000263202 MMP1P03956 469 aa26.19■■□□□ 1.78
UFD1-201ENST00000263202 PIGSQ96S52 555 aa26.19■■□□□ 1.78
UFD1-201ENST00000263202 JMJD4Q9H9V9 463 aa26.19■■□□□ 1.78
UFD1-201ENST00000263202 AS3MTQ9HBK9 375 aa26.19■■□□□ 1.78
UFD1-201ENST00000263202 IREB2P48200 963 aaKnown RBP26.18■■□□□ 1.78
UFD1-201ENST00000263202 KIF23Q02241 960 aaPredicted RBP26.18■■□□□ 1.78
UFD1-201ENST00000263202 VGLL4Q14135 290 aa26.18■■□□□ 1.78
UFD1-201ENST00000263202 LDHDQ86WU2 507 aa26.18■■□□□ 1.78
UFD1-201ENST00000263202 HOMER1Q86YM7 354 aa26.18■■□□□ 1.78
UFD1-201ENST00000263202 PHF20Q9BVI0 1012 aa26.18■■□□□ 1.78
UFD1-201ENST00000263202 SNCAIPQ9Y6H5 919 aa26.18■■□□□ 1.78
UFD1-201ENST00000263202 MCM4P33991 863 aa26.18■■□□□ 1.78
UFD1-201ENST00000263202 ZNF526Q8TF50 670 aaPredicted RBP26.18■■□□□ 1.78
UFD1-201ENST00000263202 SEC63Q9UGP8 760 aaKnown RBP26.18■■□□□ 1.78
UFD1-201ENST00000263202 USP17L10C9JJH3 530 aa26.17■■□□□ 1.78
UFD1-201ENST00000263202 TMEM232C9JQI7 657 aa26.17■■□□□ 1.78
UFD1-201ENST00000263202 FAM83BQ5T0W9 1011 aa26.17■■□□□ 1.78
UFD1-201ENST00000263202 FAM173BQ6P4H8 233 aa26.17■■□□□ 1.78
UFD1-201ENST00000263202 BTNL9Q6UXG8 535 aa26.17■■□□□ 1.78
UFD1-201ENST00000263202 ZNF280CQ8ND82 737 aa26.17■■□□□ 1.78
UFD1-201ENST00000263202 GPKOWQ92917 476 aaPredicted RBP eCLIP26.17■■□□□ 1.783e-7■■□□□ 12.2
UFD1-201ENST00000263202 MTMR8Q96EF0 704 aa26.17■■□□□ 1.78
UFD1-201ENST00000263202 SH3GLB2Q9NR46 395 aa26.17■■□□□ 1.78
UFD1-201ENST00000263202 ZHX2Q9Y6X8 837 aa26.17■■□□□ 1.78
UFD1-201ENST00000263202 KIF28PB7ZC32 967 aa26.16■■□□□ 1.78
UFD1-201ENST00000263202 SPP2Q13103 211 aa26.16■■□□□ 1.78
UFD1-201ENST00000263202 MAP3K11Q16584 847 aa26.16■■□□□ 1.78
UFD1-201ENST00000263202 WWC2Q6AWC2 1192 aa26.16■■□□□ 1.78
UFD1-201ENST00000263202 MTMR2Q13614 643 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms