RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 NOA1Q8NC60 698 aaKnown RBP10.32□□□□□ -0.76
MSH4-201ENST00000263187 HPS3Q969F9 1004 aa10.32□□□□□ -0.76
MSH4-201ENST00000263187 PCMTD1Q96MG8 357 aaPredicted RBP10.32□□□□□ -0.76
MSH4-201ENST00000263187 GPR101Q96P66 508 aaPredicted RBP10.32□□□□□ -0.76
MSH4-201ENST00000263187 FUT8Q9BYC5 575 aa10.32□□□□□ -0.76
MSH4-201ENST00000263187 SPEF2Q9C093 1822 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 KCNJ18B7U540 433 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 CYP2C19P33261 490 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 PRCPP42785 496 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 KCNJ12Q14500 433 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 NPY5RQ15761 445 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 FCHSD1Q86WN1 690 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 ANKRD18AQ8IVF6 992 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 VAT1LQ9HCJ6 419 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 ABCB6Q9NP58 842 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 MCM9Q9NXL9 1143 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.31□□□□□ -0.76
MSH4-201ENST00000263187 FAM205AQ6ZU69 1335 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 PNPLA7Q6ZV29 1317 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 CCDC66A2RUB6 948 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 CTAGE9A4FU28 777 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 USP17L3A6NCW0 530 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 USP17L4A6NCW7 530 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 NUTM2BA6NNL0 878 aaPredicted RBP10.31□□□□□ -0.76
MSH4-201ENST00000263187 NUTM2EB1AL46 878 aaPredicted RBP10.31□□□□□ -0.76
MSH4-201ENST00000263187 TPM1P09493 284 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 MECOMQ03112 1051 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 CAVIN4Q5BKX8 364 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 JAKMIP3Q5VZ66 844 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 USP17L1Q7RTZ2 530 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 IQUBQ8NA54 791 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 SLC44A5Q8NCS7 719 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 CCDC102AQ96A19 550 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 PLEKHA4Q9H4M7 779 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 ANKZF1Q9H8Y5 726 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 THSD7AQ9UPZ6 1657 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 LOC102724428A0A0B4J2F2 783 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 GOLGA6L9A6NEM1 432 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 ERVV-1B6SEH8 477 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 NKRFO15226 690 aaKnown RBP eCLIP10.31□□□□□ -0.76
MSH4-201ENST00000263187 PRPF3O43395 683 aaKnown RBP10.31□□□□□ -0.76
MSH4-201ENST00000263187 CAMTA2O94983 1202 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 STAT6P42226 847 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 COPB1P53618 953 aaKnown RBP10.31□□□□□ -0.76
MSH4-201ENST00000263187 SIK1P57059 783 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 TMTC3Q6ZXV5 915 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 SRGAP1Q7Z6B7 1085 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 TXNRD3Q86VQ6 643 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 TRIML1Q8N9V2 468 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 SPATA20Q8TB22 786 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 FAM84BQ96KN1 310 aaPredicted RBP10.31□□□□□ -0.76
MSH4-201ENST00000263187 DRC1Q96MC2 740 aa10.31□□□□□ -0.76
MSH4-201ENST00000263187 ANKRD65E5RJM6 399 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 NTSR2O95665 410 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 TUBB4AP04350 444 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 VSNL1P62760 191 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 PAK1Q13153 545 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 INF2Q27J81 1249 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 CDKAL1Q5VV42 579 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 HEATR3Q7Z4Q2 680 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 GSPT2Q8IYD1 628 aaKnown RBP10.3□□□□□ -0.76
MSH4-201ENST00000263187 RABGGTAQ92696 567 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 PANX2Q96RD6 677 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 PSMB7Q99436 277 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 ABHD10Q9NUJ1 306 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 GNL3LQ9NVN8 582 aaKnown RBP10.3□□□□□ -0.76
MSH4-201ENST00000263187 SAP30BPQ9UHR5 308 aaKnown RBP10.3□□□□□ -0.76
MSH4-201ENST00000263187 STX8Q9UNK0 236 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 RTL9Q8NET4 1388 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 MYH2Q9UKX2 1941 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 PARP4Q9UKK3 1724 aaKnown RBP10.3□□□□□ -0.76
MSH4-201ENST00000263187 RPN1P04843 607 aaKnown RBP10.3□□□□□ -0.76
MSH4-201ENST00000263187 FAM193AP78312 1265 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 TYW1BQ6NUM6 668 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 FNBP4Q8N3X1 1017 aaPredicted RBP10.3□□□□□ -0.76
MSH4-201ENST00000263187 TMEM60Q9H2L4 133 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 CDC23Q9UJX2 597 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 DUSP10Q9Y6W6 482 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 BCL9O00512 1426 aa10.3□□□□□ -0.76
MSH4-201ENST00000263187 TTC26A0AVF1 554 aa10.29□□□□□ -0.76
MSH4-201ENST00000263187 SCG2P13521 617 aa10.29□□□□□ -0.76
MSH4-201ENST00000263187 TFAP4Q01664 338 aa10.29□□□□□ -0.76
MSH4-201ENST00000263187 CYP27A1Q02318 531 aa10.29□□□□□ -0.76
MSH4-201ENST00000263187 KCTD19Q17RG1 926 aaPredicted RBP10.29□□□□□ -0.76
MSH4-201ENST00000263187 GSDMAQ96QA5 445 aa10.29□□□□□ -0.76
MSH4-201ENST00000263187 MINPP1Q9UNW1 487 aa10.29□□□□□ -0.76
MSH4-201ENST00000263187 COL4A1P02462 1669 aa10.29□□□□□ -0.76
MSH4-201ENST00000263187 TOGARAM1Q9Y4F4 1720 aa10.29□□□□□ -0.76
MSH4-201ENST00000263187 TCP11X2Q5H9J9 407 aa10.29□□□□□ -0.76
MSH4-201ENST00000263187 SH3RF1Q7Z6J0 888 aa10.29□□□□□ -0.76
MSH4-201ENST00000263187 ADAM21Q9UKJ8 722 aa10.29□□□□□ -0.76
MSH4-201ENST00000263187 CNTNAP5Q8WYK1 1306 aa10.29□□□□□ -0.76
MSH4-201ENST00000263187 BAZ2AQ9UIF9 1905 aaKnown RBP10.29□□□□□ -0.76
MSH4-201ENST00000263187 MACROD2A1Z1Q3 448 aa10.29□□□□□ -0.76
MSH4-201ENST00000263187 B4DLN1 442 aa10.29□□□□□ -0.76
MSH4-201ENST00000263187 TNNT3P45378 269 aaPredicted RBP10.29□□□□□ -0.76
MSH4-201ENST00000263187 ATP2C1P98194 919 aaPredicted RBP10.29□□□□□ -0.76
MSH4-201ENST00000263187 DIXDC1Q155Q3 683 aa10.29□□□□□ -0.76
MSH4-201ENST00000263187 FAM182BQ5T319 152 aa10.29□□□□□ -0.76
MSH4-201ENST00000263187 PDXDC2PQ6P474 469 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms