RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 PARP1P09874 1014 aaKnown RBP14.76□□□□□ -0.05
SPTLC1-201ENST00000262554 TOP1P11387 765 aaKnown RBP14.76□□□□□ -0.05
SPTLC1-201ENST00000262554 VEGFAP15692 232 aaPredicted RBP14.76□□□□□ -0.05
SPTLC1-201ENST00000262554 MYL5Q02045 173 aa14.76□□□□□ -0.05
SPTLC1-201ENST00000262554 NCAPHQ15003 741 aa14.76□□□□□ -0.05
SPTLC1-201ENST00000262554 DOK7Q18PE1 504 aa14.76□□□□□ -0.05
SPTLC1-201ENST00000262554 CCDC144BQ3MJ40 725 aa14.76□□□□□ -0.05
SPTLC1-201ENST00000262554 NT5DC1Q5TFE4 455 aa14.76□□□□□ -0.05
SPTLC1-201ENST00000262554 GALNT17Q6IS24 598 aa14.76□□□□□ -0.05
SPTLC1-201ENST00000262554 C17orf53Q8N3J3 647 aaPredicted RBP14.76□□□□□ -0.05
SPTLC1-201ENST00000262554 CERS5Q8N5B7 392 aa14.76□□□□□ -0.05
SPTLC1-201ENST00000262554 SMARCE1Q969G3 411 aa14.76□□□□□ -0.05
SPTLC1-201ENST00000262554 ZNF622Q969S3 477 aaKnown RBP eCLIP14.76□□□□□ -0.057e-10■■□□□ 11.4
SPTLC1-201ENST00000262554 RGPD3A6NKT7 1758 aaPredicted RBP14.75□□□□□ -0.05
SPTLC1-201ENST00000262554 RGPD4Q7Z3J3 1758 aa14.75□□□□□ -0.05
SPTLC1-201ENST00000262554 KLRF2D3W0D1 207 aa14.75□□□□□ -0.05
SPTLC1-201ENST00000262554 WNT7AO00755 349 aa14.75□□□□□ -0.05
SPTLC1-201ENST00000262554 TPM2P07951 284 aa14.75□□□□□ -0.05
SPTLC1-201ENST00000262554 PICALMQ13492 652 aa14.75□□□□□ -0.05
SPTLC1-201ENST00000262554 MSL1Q68DK7 614 aa14.75□□□□□ -0.05
SPTLC1-201ENST00000262554 USP49Q70CQ1 688 aa14.75□□□□□ -0.05
SPTLC1-201ENST00000262554 TRIML1Q8N9V2 468 aa14.75□□□□□ -0.05
SPTLC1-201ENST00000262554 SPZ1Q9BXG8 430 aa14.75□□□□□ -0.05
SPTLC1-201ENST00000262554 DACH1Q9UI36 760 aa14.75□□□□□ -0.05
SPTLC1-201ENST00000262554 TNS1Q9HBL0 1735 aaKnown RBP14.75□□□□□ -0.05
SPTLC1-201ENST00000262554 VWA3AA6NCI4 1184 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 CYTH3O43739 400 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 MYO1BO43795 1136 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 SMC2O95347 1197 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 WWC2Q6AWC2 1192 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 HEATR3Q7Z4Q2 680 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 DAGLBQ8NCG7 672 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 SYMPKQ92797 1274 aaKnown RBP14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 DHX58Q96C10 678 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 CEP95Q96GE4 821 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 EPSTI1Q96J88 318 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 USP40Q9NVE5 1235 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 BARHL2Q9NY43 387 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 MAN1B1Q9UKM7 699 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 PLIN4Q96Q06 1357 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 CCDC194A0A1B0GVG4 234 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 SLFN14P0C7P3 912 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 GOLGA8HP0CJ92 632 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 RXRBP28702 533 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 MCM7P33993 719 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 SARSP49591 514 aaKnown RBP14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 LRMPQ12912 555 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 HHIPL2Q6UWX4 724 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 C2CD5Q86YS7 1000 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 MLKLQ8NB16 471 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 CCDC12Q8WUD4 166 aaPredicted RBP14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 CACTINQ8WUQ7 758 aaKnown RBP14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 TEKT1Q969V4 418 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 PYM1Q9BRP8 204 aaKnown RBP14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 XPO4Q9C0E2 1151 aaKnown RBP14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 IFNKQ9P0W0 207 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 IMPACTQ9P2X3 320 aa14.74□□□□□ -0.05
SPTLC1-201ENST00000262554 H0YIN7 160 aa14.73□□□□□ -0.05
SPTLC1-201ENST00000262554 STXBP3O00186 592 aa14.73□□□□□ -0.05
SPTLC1-201ENST00000262554 PRR29P0C7W0 189 aa14.73□□□□□ -0.05
SPTLC1-201ENST00000262554 SMARCA1P28370 1054 aa14.73□□□□□ -0.05
SPTLC1-201ENST00000262554 LMOD1P29536 600 aaPredicted RBP14.73□□□□□ -0.05
SPTLC1-201ENST00000262554 NOVP48745 357 aa14.73□□□□□ -0.05
SPTLC1-201ENST00000262554 SCNN1DP51172 638 aa14.73□□□□□ -0.05
SPTLC1-201ENST00000262554 GSDMDP57764 484 aa14.73□□□□□ -0.05
SPTLC1-201ENST00000262554 SLC35G1Q2M3R5 365 aa14.73□□□□□ -0.05
SPTLC1-201ENST00000262554 ARL6IP4Q66PJ3 421 aaKnown RBP14.73□□□□□ -0.05
SPTLC1-201ENST00000262554 STYK1Q6J9G0 422 aa14.73□□□□□ -0.05
SPTLC1-201ENST00000262554 PODNQ7Z5L7 613 aa14.73□□□□□ -0.05
SPTLC1-201ENST00000262554 LRRC8AQ8IWT6 810 aa14.73□□□□□ -0.05
SPTLC1-201ENST00000262554 M0R2N6 131 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 ADAMTS3O15072 1205 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 FANCCQ00597 558 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 GABPAQ06546 454 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 MORC3Q14149 939 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 FILIP1Q7Z7B0 1213 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 GRAMD1CQ8IYS0 662 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 RRP36Q96EU6 259 aaKnown RBP14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 MXD3Q9BW11 206 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 DDX4Q9NQI0 724 aaKnown RBP14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 SEC63Q9UGP8 760 aaKnown RBP14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 SWAP70Q9UH65 585 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 ADAMTSL1Q8N6G6 1762 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 MYO3BQ8WXR4 1341 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 A0A087X0B3 334 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 CBFA2T2O43439 604 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 BMP6P22004 513 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 DHX8Q14562 1220 aaKnown RBP14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 TYW1BQ6NUM6 668 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 USP17L2Q6R6M4 530 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 SPATA20Q8TB22 786 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 MTMR4Q9NYA4 1195 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 SERPINB13Q9UIV8 391 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 PCDHA6Q9UN73 950 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 PCDHA8Q9Y5H6 950 aa14.72□□□□□ -0.05
SPTLC1-201ENST00000262554 CDC42EP5Q6NZY7 148 aa14.71□□□□□ -0.05
SPTLC1-201ENST00000262554 IQUBQ8NA54 791 aa14.71□□□□□ -0.05
SPTLC1-201ENST00000262554 PAGE5Q96GU1 130 aa14.71□□□□□ -0.05
SPTLC1-201ENST00000262554 OSBPL5Q9H0X9 879 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms