RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 MNX1P50219 401 aaPredicted RBP14.62□□□□□ -0.07
TRAF4-202ENST00000262396 MDM2Q00987 491 aaPredicted RBP14.62□□□□□ -0.07
TRAF4-202ENST00000262396 KIAA1755Q5JYT7 1200 aa14.62□□□□□ -0.07
TRAF4-202ENST00000262396 GJC2Q5T442 439 aaPredicted RBP14.62□□□□□ -0.07
TRAF4-202ENST00000262396 GIMAP6Q6P9H5 292 aa14.62□□□□□ -0.07
TRAF4-202ENST00000262396 TDHQ8IZJ6 230 aa14.62□□□□□ -0.07
TRAF4-202ENST00000262396 ABRAQ8N0Z2 381 aa14.62□□□□□ -0.07
TRAF4-202ENST00000262396 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
TRAF4-202ENST00000262396 GDF15Q99988 308 aa14.62□□□□□ -0.07
TRAF4-202ENST00000262396 FSD1Q9BTV5 496 aa14.62□□□□□ -0.07
TRAF4-202ENST00000262396 PRO3102Q9H379 93 aa14.62□□□□□ -0.07
TRAF4-202ENST00000262396 DCTPP1Q9H773 170 aa14.62□□□□□ -0.07
TRAF4-202ENST00000262396 PRDM5Q9NQX1 630 aaPredicted RBP14.62□□□□□ -0.07
TRAF4-202ENST00000262396 ATP11BQ9Y2G3 1177 aa14.62□□□□□ -0.07
TRAF4-202ENST00000262396 DDX60LQ5H9U9 1706 aaKnown RBP14.61□□□□□ -0.07
TRAF4-202ENST00000262396 SEPT4O43236 478 aa14.61□□□□□ -0.07
TRAF4-202ENST00000262396 GPAA1O43292 621 aa14.61□□□□□ -0.07
TRAF4-202ENST00000262396 ZBED4O75132 1171 aa14.61□□□□□ -0.07
TRAF4-202ENST00000262396 IKQ13123 557 aaPredicted RBP14.61□□□□□ -0.07
TRAF4-202ENST00000262396 TMEM132BQ14DG7 1078 aa14.61□□□□□ -0.07
TRAF4-202ENST00000262396 LRCH3Q96II8 777 aa14.61□□□□□ -0.07
TRAF4-202ENST00000262396 FBXO28Q9NVF7 368 aa14.61□□□□□ -0.07
TRAF4-202ENST00000262396 CLIP2Q9UDT6 1046 aa14.61□□□□□ -0.07
TRAF4-202ENST00000262396 PPP1R9AQ9ULJ8 1098 aa14.61□□□□□ -0.07
TRAF4-202ENST00000262396 CNPY2Q9Y2B0 182 aa14.61□□□□□ -0.07
TRAF4-202ENST00000262396 PLXNB2O15031 1838 aa14.61□□□□□ -0.07
TRAF4-202ENST00000262396 SMIM22K7EJ46 135 aa14.6□□□□□ -0.07
TRAF4-202ENST00000262396 COBLO75128 1261 aa14.6□□□□□ -0.07
TRAF4-202ENST00000262396 RARBP10826 455 aa14.6□□□□□ -0.07
TRAF4-202ENST00000262396 COL6A1P12109 1028 aa14.6□□□□□ -0.07
TRAF4-202ENST00000262396 CYBAP13498 195 aa14.6□□□□□ -0.07
TRAF4-202ENST00000262396 PDE4BQ07343 736 aa14.6□□□□□ -0.07
TRAF4-202ENST00000262396 SBK1Q52WX2 424 aa14.6□□□□□ -0.07
TRAF4-202ENST00000262396 PRAMEF19Q5SWL8 479 aa14.6□□□□□ -0.07
TRAF4-202ENST00000262396 SIAH1Q8IUQ4 282 aa14.6□□□□□ -0.07
TRAF4-202ENST00000262396 OSBP2Q969R2 916 aa14.6□□□□□ -0.07
TRAF4-202ENST00000262396 KIFC2Q96AC6 838 aa14.6□□□□□ -0.07
TRAF4-202ENST00000262396 MAML3Q96JK9 1138 aa14.6□□□□□ -0.07
TRAF4-202ENST00000262396 SLF1Q9BQI6 1058 aa14.6□□□□□ -0.07
TRAF4-202ENST00000262396 NAPBQ9H115 298 aa14.6□□□□□ -0.07
TRAF4-202ENST00000262396 GSG1L2A8MUP6 293 aa14.59□□□□□ -0.07
TRAF4-202ENST00000262396 F5H6K3 240 aa14.59□□□□□ -0.07
TRAF4-202ENST00000262396 VWA5AO00534 786 aa14.59□□□□□ -0.07
TRAF4-202ENST00000262396 PRDM1O75626 825 aa14.59□□□□□ -0.07
TRAF4-202ENST00000262396 PGK2P07205 417 aa14.59□□□□□ -0.07
TRAF4-202ENST00000262396 TSPY3P0CV98 308 aa14.59□□□□□ -0.07
TRAF4-202ENST00000262396 TSPY8P0CW00 308 aa14.59□□□□□ -0.07
TRAF4-202ENST00000262396 RTP1P59025 263 aa14.59□□□□□ -0.07
TRAF4-202ENST00000262396 KLRC3Q07444 240 aa14.59□□□□□ -0.07
TRAF4-202ENST00000262396 SNRNP48Q6IEG0 339 aaKnown RBP14.59□□□□□ -0.07
TRAF4-202ENST00000262396 RNF180Q86T96 592 aa14.59□□□□□ -0.07
TRAF4-202ENST00000262396 RIOX2Q8IUF8 465 aa14.59□□□□□ -0.07
TRAF4-202ENST00000262396 CPXCR1Q8N123 301 aa14.59□□□□□ -0.07
TRAF4-202ENST00000262396 TRPV1Q8NER1 839 aa14.59□□□□□ -0.07
TRAF4-202ENST00000262396 NUP88Q99567 741 aaPredicted RBP14.59□□□□□ -0.07
TRAF4-202ENST00000262396 NYAP2Q9P242 653 aa14.59□□□□□ -0.07
TRAF4-202ENST00000262396 TTC41PQ6P2S7 1318 aa14.59□□□□□ -0.07
TRAF4-202ENST00000262396 PATL2C9JE40 543 aaKnown RBP14.58□□□□□ -0.08
TRAF4-202ENST00000262396 SOX1O00570 391 aaPredicted RBP14.58□□□□□ -0.08
TRAF4-202ENST00000262396 DEFB123Q8N688 67 aa14.58□□□□□ -0.08
TRAF4-202ENST00000262396 PRPF38AQ8NAV1 312 aaKnown RBP14.58□□□□□ -0.08
TRAF4-202ENST00000262396 SLC17A8Q8NDX2 589 aa14.58□□□□□ -0.08
TRAF4-202ENST00000262396 FERMT2Q96AC1 680 aa14.58□□□□□ -0.08
TRAF4-202ENST00000262396 TEX13BQ9BXU2 312 aa14.58□□□□□ -0.08
TRAF4-202ENST00000262396 XPNPEP3Q9NQH7 507 aa14.58□□□□□ -0.08
TRAF4-202ENST00000262396 M0R2C6 588 aa14.57□□□□□ -0.08
TRAF4-202ENST00000262396 NDUFB10O96000 172 aa14.57□□□□□ -0.08
TRAF4-202ENST00000262396 RASA1P20936 1047 aa14.57□□□□□ -0.08
TRAF4-202ENST00000262396 ADCYAP1R1P41586 468 aa14.57□□□□□ -0.08
TRAF4-202ENST00000262396 PPP4R3BQ5MIZ7 849 aa14.57□□□□□ -0.08
TRAF4-202ENST00000262396 IFNL3Q8IZI9 196 aa14.57□□□□□ -0.08
TRAF4-202ENST00000262396 ANKRD35Q8N283 1001 aa14.57□□□□□ -0.08
TRAF4-202ENST00000262396 TINF2Q9BSI4 451 aa14.57□□□□□ -0.08
TRAF4-202ENST00000262396 MYH8P13535 1937 aa14.56□□□□□ -0.08
TRAF4-202ENST00000262396 BAZ2AQ9UIF9 1905 aaKnown RBP14.56□□□□□ -0.08
TRAF4-202ENST00000262396 TTLL1O95922 423 aa14.56□□□□□ -0.08
TRAF4-202ENST00000262396 LRIT3Q3SXY7 679 aa14.56□□□□□ -0.08
TRAF4-202ENST00000262396 ANKRD45Q5TZF3 282 aa14.56□□□□□ -0.08
TRAF4-202ENST00000262396 SLC39A5Q6ZMH5 540 aa14.56□□□□□ -0.08
TRAF4-202ENST00000262396 LRRC47Q8N1G4 583 aaKnown RBP14.56□□□□□ -0.08
TRAF4-202ENST00000262396 CHMP4CQ96CF2 233 aa14.56□□□□□ -0.08
TRAF4-202ENST00000262396 TOMM22Q9NS69 142 aa14.56□□□□□ -0.08
TRAF4-202ENST00000262396 NRBP1Q9UHY1 535 aa14.56□□□□□ -0.08
TRAF4-202ENST00000262396 FEM1BQ9UK73 627 aa14.56□□□□□ -0.08
TRAF4-202ENST00000262396 ZHX1Q9UKY1 873 aaPredicted RBP14.56□□□□□ -0.08
TRAF4-202ENST00000262396 DIS3Q9Y2L1 958 aaKnown RBP14.56□□□□□ -0.08
TRAF4-202ENST00000262396 TSPY2A6NKD2 308 aa14.55□□□□□ -0.08
TRAF4-202ENST00000262396 AKR1A1P14550 325 aa14.55□□□□□ -0.08
TRAF4-202ENST00000262396 MX1P20591 662 aa14.55□□□□□ -0.08
TRAF4-202ENST00000262396 LRRC41Q15345 812 aa14.55□□□□□ -0.08
TRAF4-202ENST00000262396 FAM47AQ5JRC9 791 aa14.55□□□□□ -0.08
TRAF4-202ENST00000262396 SLFN13Q68D06 897 aa14.55□□□□□ -0.08
TRAF4-202ENST00000262396 VTI1AQ96AJ9 217 aa14.55□□□□□ -0.08
TRAF4-202ENST00000262396 CEP95Q96GE4 821 aa14.55□□□□□ -0.08
TRAF4-202ENST00000262396 SPC25Q9HBM1 224 aa14.55□□□□□ -0.08
TRAF4-202ENST00000262396 RAVER2Q9HCJ3 691 aaKnown RBP14.55□□□□□ -0.08
TRAF4-202ENST00000262396 FBXO40Q9UH90 709 aa14.55□□□□□ -0.08
TRAF4-202ENST00000262396 FAM184BQ9ULE4 1060 aa14.55□□□□□ -0.08
TRAF4-202ENST00000262396 MTMR7Q9Y216 660 aa14.55□□□□□ -0.08
TRAF4-202ENST00000262396 BMP3P12645 472 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms