RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 IFIT3O14879 490 aaKnown RBP22■■□□□ 1.11
CYSTM1-201ENST00000261811 GNRH1P01148 92 aa22■■□□□ 1.11
CYSTM1-201ENST00000261811 CCNA1P78396 465 aa22■■□□□ 1.11
CYSTM1-201ENST00000261811 LACTBP83111 547 aaPredicted RBP22■■□□□ 1.11
CYSTM1-201ENST00000261811 TSGA10IPQ3SY00 556 aa22■■□□□ 1.11
CYSTM1-201ENST00000261811 CHURC1Q8WUH1 139 aa22■■□□□ 1.11
CYSTM1-201ENST00000261811 DCAF4Q8WV16 495 aa22■■□□□ 1.11
CYSTM1-201ENST00000261811 ANKS1AQ92625 1134 aa22■■□□□ 1.11
CYSTM1-201ENST00000261811 MYH6P13533 1939 aa21.99■■□□□ 1.11
CYSTM1-201ENST00000261811 HMGB1P09429 215 aaKnown RBP21.99■■□□□ 1.11
CYSTM1-201ENST00000261811 HOXD10P28358 340 aa21.99■■□□□ 1.11
CYSTM1-201ENST00000261811 DSG3P32926 999 aa21.99■■□□□ 1.11
CYSTM1-201ENST00000261811 HSPA4P34932 840 aa21.99■■□□□ 1.11
CYSTM1-201ENST00000261811 IKQ13123 557 aaPredicted RBP21.99■■□□□ 1.11
CYSTM1-201ENST00000261811 RCSD1Q6JBY9 416 aa21.99■■□□□ 1.11
CYSTM1-201ENST00000261811 PRPF38AQ8NAV1 312 aaKnown RBP21.99■■□□□ 1.11
CYSTM1-201ENST00000261811 SLF1Q9BQI6 1058 aa21.99■■□□□ 1.11
CYSTM1-201ENST00000261811 PAGR1Q9BTK6 254 aa21.99■■□□□ 1.11
CYSTM1-201ENST00000261811 MORF4L1Q9UBU8 362 aa21.99■■□□□ 1.11
CYSTM1-201ENST00000261811 MTMR7Q9Y216 660 aa21.99■■□□□ 1.11
CYSTM1-201ENST00000261811 A0A0G2JMZ2 1700 aa21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 STAT2P52630 851 aa21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 FCGRTP55899 365 aa21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 WTAPQ15007 396 aa21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 PKN2Q16513 984 aaKnown RBP21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 CCDC96Q2M329 555 aa21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 SAMD1Q6SPF0 538 aaPredicted RBP21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 STOX1Q6ZVD7 989 aa21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 CYB5R4Q7L1T6 521 aa21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 CTU1Q7Z7A3 348 aaKnown RBP21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 FAM160B2Q86V87 743 aa21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 TMTC2Q8N394 836 aa21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 ENAHQ8N8S7 591 aaPredicted RBP21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 PNMA1Q8ND90 353 aa21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 CD99L2Q8TCZ2 262 aa21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 NEK1Q96PY6 1258 aa21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 CWC22Q9HCG8 908 aaKnown RBP21.98■■□□□ 1.11
CYSTM1-201ENST00000261811 DOCK3Q8IZD9 2030 aa21.97■■□□□ 1.11
CYSTM1-201ENST00000261811 SPDYE16A6NNV3 312 aaPredicted RBP21.97■■□□□ 1.11
CYSTM1-201ENST00000261811 FMNL1O95466 1100 aaPredicted RBP21.97■■□□□ 1.11
CYSTM1-201ENST00000261811 FDX1P10109 184 aa21.97■■□□□ 1.11
CYSTM1-201ENST00000261811 MB21D2Q8IYB1 491 aaPredicted RBP21.97■■□□□ 1.11
CYSTM1-201ENST00000261811 TMEM87BQ96K49 555 aa21.97■■□□□ 1.11
CYSTM1-201ENST00000261811 NUP88Q99567 741 aaPredicted RBP21.97■■□□□ 1.11
CYSTM1-201ENST00000261811 EFCC1Q9HA90 598 aa21.97■■□□□ 1.11
CYSTM1-201ENST00000261811 PPP1R9AQ9ULJ8 1098 aa21.97■■□□□ 1.11
CYSTM1-201ENST00000261811 PSMA5P28066 241 aa21.96■■□□□ 1.11
CYSTM1-201ENST00000261811 PSMC4P43686 418 aa21.96■■□□□ 1.11
CYSTM1-201ENST00000261811 ERVK-9P63128 1117 aa21.96■■□□□ 1.11
CYSTM1-201ENST00000261811 ERVK-24P63145 666 aa21.96■■□□□ 1.11
CYSTM1-201ENST00000261811 TMEM67Q5HYA8 995 aa21.96■■□□□ 1.11
CYSTM1-201ENST00000261811 USP26Q9BXU7 913 aa21.96■■□□□ 1.11
CYSTM1-201ENST00000261811 RBPJLQ9UBG7 517 aa21.96■■□□□ 1.11
CYSTM1-201ENST00000261811 TAF6LQ9Y6J9 622 aa21.96■■□□□ 1.11
CYSTM1-201ENST00000261811 TMEM232C9JQI7 657 aa21.95■■□□□ 1.1
CYSTM1-201ENST00000261811 PRC1O43663 620 aa21.95■■□□□ 1.1
CYSTM1-201ENST00000261811 PLA2G6O60733 806 aa21.95■■□□□ 1.1
CYSTM1-201ENST00000261811 ZBED4O75132 1171 aa21.95■■□□□ 1.1
CYSTM1-201ENST00000261811 GPATCH4Q5T3I0 446 aaKnown RBP21.95■■□□□ 1.1
CYSTM1-201ENST00000261811 COA7Q96BR5 231 aa21.95■■□□□ 1.1
CYSTM1-201ENST00000261811 TRIM17Q9Y577 477 aa21.95■■□□□ 1.1
CYSTM1-201ENST00000261811 WDR19Q8NEZ3 1342 aa21.95■■□□□ 1.1
CYSTM1-201ENST00000261811 ZNFX1Q9P2E3 1918 aaKnown RBP21.94■■□□□ 1.1
CYSTM1-201ENST00000261811 TNPO2O14787 897 aaKnown RBP21.94■■□□□ 1.1
CYSTM1-201ENST00000261811 MAPK4P31152 587 aa21.94■■□□□ 1.1
CYSTM1-201ENST00000261811 PRMT2P55345 433 aa21.94■■□□□ 1.1
CYSTM1-201ENST00000261811 SEC23AQ15436 765 aa21.94■■□□□ 1.1
CYSTM1-201ENST00000261811 CHST3Q7LGC8 479 aa21.94■■□□□ 1.1
CYSTM1-201ENST00000261811 NKX2-3Q8TAU0 364 aa21.94■■□□□ 1.1
CYSTM1-201ENST00000261811 KCNB2Q92953 911 aa21.94■■□□□ 1.1
CYSTM1-201ENST00000261811 KIFC2Q96AC6 838 aa21.94■■□□□ 1.1
CYSTM1-201ENST00000261811 ATG4CQ96DT6 458 aa21.94■■□□□ 1.1
CYSTM1-201ENST00000261811 ZSWIM8A7E2V4 1837 aa21.94■■□□□ 1.1
CYSTM1-201ENST00000261811 PDHBP11177 359 aa21.93■■□□□ 1.1
CYSTM1-201ENST00000261811 FGD1P98174 961 aa21.93■■□□□ 1.1
CYSTM1-201ENST00000261811 PLS1Q14651 629 aa21.93■■□□□ 1.1
CYSTM1-201ENST00000261811 KCTD1Q719H9 257 aa21.93■■□□□ 1.1
CYSTM1-201ENST00000261811 DHX32Q7L7V1 743 aaKnown RBP21.93■■□□□ 1.1
CYSTM1-201ENST00000261811 CATIPQ7Z7H3 387 aa21.93■■□□□ 1.1
CYSTM1-201ENST00000261811 RASEFQ8IZ41 740 aa21.93■■□□□ 1.1
CYSTM1-201ENST00000261811 FBXO28Q9NVF7 368 aa21.93■■□□□ 1.1
CYSTM1-201ENST00000261811 ADAMTS5Q9UNA0 930 aa21.93■■□□□ 1.1
CYSTM1-201ENST00000261811 PLXNB2O15031 1838 aa21.93■■□□□ 1.1
CYSTM1-201ENST00000261811 CCDC69A6NI79 296 aa21.92■■□□□ 1.1
CYSTM1-201ENST00000261811 VWA5AO00534 786 aa21.92■■□□□ 1.1
CYSTM1-201ENST00000261811 COPB2P35606 906 aa21.92■■□□□ 1.1
CYSTM1-201ENST00000261811 ASPRV1Q53RT3 343 aa21.92■■□□□ 1.1
CYSTM1-201ENST00000261811 BLOC1S2Q6QNY1 142 aa21.92■■□□□ 1.1
CYSTM1-201ENST00000261811 NFXL1Q6ZNB6 911 aa21.92■■□□□ 1.1
CYSTM1-201ENST00000261811 IGDCC4Q8TDY8 1250 aa21.92■■□□□ 1.1
CYSTM1-201ENST00000261811 CHMP4CQ96CF2 233 aa21.92■■□□□ 1.1
CYSTM1-201ENST00000261811 TXNRD2Q9NNW7 524 aa21.92■■□□□ 1.1
CYSTM1-201ENST00000261811 SNX14Q9Y5W7 946 aa21.92■■□□□ 1.1
CYSTM1-201ENST00000261811 PARP1P09874 1014 aaKnown RBP21.91■■□□□ 1.1
CYSTM1-201ENST00000261811 ZNF543Q08ER8 600 aa21.91■■□□□ 1.1
CYSTM1-201ENST00000261811 SYNE3Q6ZMZ3 975 aa21.91■■□□□ 1.1
CYSTM1-201ENST00000261811 OTOP1Q7RTM1 612 aa21.91■■□□□ 1.1
CYSTM1-201ENST00000261811 JAKMIP1Q96N16 626 aaKnown RBP21.91■■□□□ 1.1
CYSTM1-201ENST00000261811 SPATC1LQ9H0A9 340 aa21.91■■□□□ 1.1
CYSTM1-201ENST00000261811 BTBD7Q9P203 1132 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms