RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 IMPACTQ9P2X3 320 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 CHD1O14646 1710 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 YARSP54577 528 aaKnown RBP13.36□□□□□ -0.27
COL8A1-201ENST00000261037 MORC3Q14149 939 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 SDCCAG8Q86SQ7 713 aaPredicted RBP13.36□□□□□ -0.27
COL8A1-201ENST00000261037 SESTD1Q86VW0 696 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 CCDC125Q86Z20 511 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 DESI2Q9BSY9 194 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 MLXIPQ9HAP2 919 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 LMBRD1Q9NUN5 540 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 SEPT10Q9P0V9 454 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 KDRP35968 1356 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 TMEM2Q9UHN6 1383 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 ABL1P00519 1130 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 ZNF827Q17R98 1081 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 LRRC24Q50LG9 513 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 CAPN12Q6ZSI9 719 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 NSMCE1Q8WV22 266 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 RRAGDQ9NQL2 400 aaPredicted RBP13.36□□□□□ -0.27
COL8A1-201ENST00000261037 CFAP65Q6ZU64 1925 aaKnown RBP13.36□□□□□ -0.27
COL8A1-201ENST00000261037 K7ENM7 598 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 IFNL3Q8IZI9 196 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 ARHGEF10O15013 1369 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 CFAP221Q4G0U5 840 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 TAOK1Q7L7X3 1001 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 ADAT2Q7Z6V5 191 aaKnown RBP13.36□□□□□ -0.27
COL8A1-201ENST00000261037 BCS1LQ9Y276 419 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 MBD5Q9P267 1494 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 ATP5JP18859 108 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 KRT81Q14533 505 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 TEKT1Q969V4 418 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 CLIC6Q96NY7 704 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 RIOK1Q9BRS2 568 aaKnown RBP13.36□□□□□ -0.27
COL8A1-201ENST00000261037 PANK4Q9NVE7 773 aa13.36□□□□□ -0.27
COL8A1-201ENST00000261037 NR1I2O75469 434 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 TUBBP07437 444 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 ALDH1B1P30837 517 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 MCUR1Q96AQ8 359 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 PSTPIP2Q9H939 334 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 SAMD9LQ8IVG5 1584 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 I3L4J1 428 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 GIPC1O14908 333 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 BUB1BO60566 1050 aaPredicted RBP13.35□□□□□ -0.27
COL8A1-201ENST00000261037 TCIRG1Q13488 830 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 ERCC6LQ2NKX8 1250 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 GBP6Q6ZN66 633 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 OTUD6AQ7L8S5 288 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 BLIDQ8IZY5 108 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 GSPT1P15170 499 aaKnown RBP13.35□□□□□ -0.27
COL8A1-201ENST00000261037 OAS2P29728 719 aaKnown RBP13.35□□□□□ -0.27
COL8A1-201ENST00000261037 BTDP43251 543 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 CERS3Q8IU89 383 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 MMS19Q96T76 1030 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 PCK1P35558 622 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 PAK2Q13177 524 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 B4GALNT4Q76KP1 1039 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 KIAA0825Q8IV33 1275 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 TACC3Q9Y6A5 838 aa13.35□□□□□ -0.27
COL8A1-201ENST00000261037 YEATS2Q9ULM3 1422 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 ARHGAP6O43182 974 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 CCDC62Q6P9F0 684 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 RSAD2Q8WXG1 361 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 KDM3AQ9Y4C1 1321 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 GBP1P32455 592 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 LIG4P49917 911 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 RPS8P62241 208 aaKnown RBP13.34□□□□□ -0.27
COL8A1-201ENST00000261037 IGBP1P78318 339 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 KMT5BQ4FZB7 885 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 XKR9Q5GH70 373 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 VSIG1Q86XK7 387 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 HINFPQ9BQA5 517 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 DDX25Q9UHL0 483 aaKnown RBP13.34□□□□□ -0.27
COL8A1-201ENST00000261037 DENND2CQ68D51 928 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 HOOK2Q96ED9 719 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 TPCN1Q9ULQ1 816 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 ZMYM6O95789 1325 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 TUBB2AQ13885 445 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 AFAP1L2Q8N4X5 818 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 TUBB2BQ9BVA1 445 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 AMFRQ9UKV5 643 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 PLXNC1O60486 1568 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 SYNJ2BP-COX16A0A087WUM0 186 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 KCNK3O14649 394 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 GIGYF1O75420 1035 aaPredicted RBP13.34□□□□□ -0.27
COL8A1-201ENST00000261037 STAM2O75886 525 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 CNGA1P29973 690 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 TBC1D10BQ4KMP7 808 aaPredicted RBP13.34□□□□□ -0.27
COL8A1-201ENST00000261037 MYSM1Q5VVJ2 828 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 NT5C3AQ9H0P0 336 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 COX16Q9P0S2 106 aa13.34□□□□□ -0.27
COL8A1-201ENST00000261037 VPS41P49754 854 aa13.33□□□□□ -0.27
COL8A1-201ENST00000261037 ITKQ08881 620 aa13.33□□□□□ -0.27
COL8A1-201ENST00000261037 CUL4BQ13620 913 aa13.33□□□□□ -0.27
COL8A1-201ENST00000261037 CTAGE3PQ8IX95 158 aa13.33□□□□□ -0.27
COL8A1-201ENST00000261037 MYOCDQ8IZQ8 938 aa13.33□□□□□ -0.27
COL8A1-201ENST00000261037 PPP1R12CQ9BZL4 782 aa13.33□□□□□ -0.27
COL8A1-201ENST00000261037 SLC39A2Q9NP94 309 aa13.33□□□□□ -0.27
COL8A1-201ENST00000261037 TMEM63CQ9P1W3 806 aa13.33□□□□□ -0.27
COL8A1-201ENST00000261037 PALD1Q9ULE6 856 aa13.33□□□□□ -0.27
COL8A1-201ENST00000261037 XRCC5P13010 732 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms