RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 KIF23Q02241 960 aaPredicted RBP10.93□□□□□ -0.66
NIP7-202ENST00000254941 PFKFB3Q16875 520 aaPredicted RBP10.93□□□□□ -0.66
NIP7-202ENST00000254941 SLC35G1Q2M3R5 365 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 ATL3Q6DD88 541 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 BRAPQ7Z569 592 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 L3MBTL3Q96JM7 780 aaPredicted RBP10.93□□□□□ -0.66
NIP7-202ENST00000254941 GGA3Q9NZ52 723 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 ZBTB21Q9ULJ3 1066 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 PITPNM2Q9BZ72 1349 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 DOCK1Q14185 1865 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 TRAK2O60296 914 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 ASNSP08243 561 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 ZNF543Q08ER8 600 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 SKOR2Q2VWA4 1001 aaPredicted RBP10.93□□□□□ -0.66
NIP7-202ENST00000254941 GPATCH4Q5T3I0 446 aaKnown RBP10.93□□□□□ -0.66
NIP7-202ENST00000254941 USP48Q86UV5 1035 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 SCAND2PQ9GZW5 306 aaPredicted RBP10.93□□□□□ -0.66
NIP7-202ENST00000254941 RIOX1Q9H6W3 641 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 GDPD2Q9HCC8 539 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 PPP2R3BQ9Y5P8 575 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 KIF28PB7ZC32 967 aa10.92□□□□□ -0.66
NIP7-202ENST00000254941 NCLP19338 710 aaKnown RBP10.92□□□□□ -0.66
NIP7-202ENST00000254941 CSPP1Q1MSJ5 1256 aa10.92□□□□□ -0.66
NIP7-202ENST00000254941 NBPF12Q5TAG4 269 aaPredicted RBP10.92□□□□□ -0.66
NIP7-202ENST00000254941 GMCL1P1Q8NEA9 526 aa10.92□□□□□ -0.66
NIP7-202ENST00000254941 SHISA4Q96DD7 197 aa10.92□□□□□ -0.66
NIP7-202ENST00000254941 HOOK2Q96ED9 719 aa10.92□□□□□ -0.66
NIP7-202ENST00000254941 PHF20Q9BVI0 1012 aa10.92□□□□□ -0.66
NIP7-202ENST00000254941 VPS54Q9P1Q0 977 aa10.92□□□□□ -0.66
NIP7-202ENST00000254941 CFAP45Q9UL16 551 aa10.92□□□□□ -0.66
NIP7-202ENST00000254941 ELP1O95163 1332 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 GLTPD2A6NH11 291 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 F5H6K3 240 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 FIBPO43427 364 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 VEGFAP15692 232 aaPredicted RBP10.91□□□□□ -0.66
NIP7-202ENST00000254941 KLRC3Q07444 240 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 SAFBQ15424 915 aaKnown RBP eCLIP10.91□□□□□ -0.66
NIP7-202ENST00000254941 DCAF4Q8WV16 495 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 GMCL1Q96IK5 515 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 FOXP1Q9H334 677 aaPredicted RBP10.91□□□□□ -0.66
NIP7-202ENST00000254941 SH3GLB2Q9NR46 395 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 GINM1Q9NU53 330 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 TFIP11Q9UBB9 837 aaKnown RBP10.91□□□□□ -0.66
NIP7-202ENST00000254941 KCNJ14Q9UNX9 436 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 FRMPD2Q68DX3 1309 aaPredicted RBP10.91□□□□□ -0.66
NIP7-202ENST00000254941 A0A1W2PRG0 241 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 SOCS7O14512 581 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 CTNND1O60716 968 aaKnown RBP10.91□□□□□ -0.66
NIP7-202ENST00000254941 KLHL40Q2TBA0 621 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 MYSM1Q5VVJ2 828 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 DCAF15Q66K64 600 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 SLFN13Q68D06 897 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 DIS3L2Q8IYB7 885 aaKnown RBP10.91□□□□□ -0.66
NIP7-202ENST00000254941 FAM177A1Q8N128 213 aaPredicted RBP10.91□□□□□ -0.66
NIP7-202ENST00000254941 RRP36Q96EU6 259 aaKnown RBP10.91□□□□□ -0.66
NIP7-202ENST00000254941 ZNF396Q96N95 335 aaPredicted RBP10.91□□□□□ -0.66
NIP7-202ENST00000254941 CPVLQ9H3G5 476 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 ARHGEF10LQ9HCE6 1279 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 TMX2Q9Y320 296 aa10.91□□□□□ -0.66
NIP7-202ENST00000254941 PHIPQ8WWQ0 1821 aa10.9□□□□□ -0.66
NIP7-202ENST00000254941 BTBD18B2RXH4 712 aa10.9□□□□□ -0.66
NIP7-202ENST00000254941 SLC1A4P43007 532 aa10.9□□□□□ -0.66
NIP7-202ENST00000254941 GNL2Q13823 731 aaKnown RBP10.9□□□□□ -0.66
NIP7-202ENST00000254941 NPY5RQ15761 445 aa10.9□□□□□ -0.66
NIP7-202ENST00000254941 USP50Q70EL3 339 aaPredicted RBP10.9□□□□□ -0.66
NIP7-202ENST00000254941 KCTD1Q719H9 257 aa10.9□□□□□ -0.66
NIP7-202ENST00000254941 NOSTRINQ8IVI9 506 aa10.9□□□□□ -0.66
NIP7-202ENST00000254941 LEO1Q8WVC0 666 aaPredicted RBP10.9□□□□□ -0.66
NIP7-202ENST00000254941 PIBF1Q8WXW3 757 aa10.9□□□□□ -0.66
NIP7-202ENST00000254941 USP28Q96RU2 1077 aa10.9□□□□□ -0.66
NIP7-202ENST00000254941 UBA5Q9GZZ9 404 aa10.9□□□□□ -0.66
NIP7-202ENST00000254941 GPCPD1Q9NPB8 672 aa10.9□□□□□ -0.66
NIP7-202ENST00000254941 BARHL2Q9NY43 387 aa10.9□□□□□ -0.66
NIP7-202ENST00000254941 ZNF112Q9UJU3 913 aa10.9□□□□□ -0.66
NIP7-202ENST00000254941 DDX49Q9Y6V7 483 aaKnown RBP10.9□□□□□ -0.66
NIP7-202ENST00000254941 WDR90Q96KV7 1748 aa10.9□□□□□ -0.67
NIP7-202ENST00000254941 NDUFB10O96000 172 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 ECE1P42892 770 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 CCDC96Q2M329 555 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 ACER1Q8TDN7 264 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 SPATA32Q96LK8 384 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 ZNF341Q9BYN7 854 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 SH2D4AQ9H788 454 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 SEC63Q9UGP8 760 aaKnown RBP10.89□□□□□ -0.67
NIP7-202ENST00000254941 RCOR1Q9UKL0 485 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 SSC5DA1L4H1 1573 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 GADD45BO75293 160 aaPredicted RBP10.89□□□□□ -0.67
NIP7-202ENST00000254941 CALML3P27482 149 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 KRT2P35908 639 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 UBE2HP62256 183 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 NR5A1Q13285 461 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 SUPT20HL1Q3ZLR7 823 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 PRAMEF18Q5VWM3 479 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 WWC2Q6AWC2 1192 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 TTBK2Q6IQ55 1244 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 ADGRF4Q8IZF3 695 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 GPT2Q8TD30 523 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 OXER1Q8TDS5 423 aa10.89□□□□□ -0.67
NIP7-202ENST00000254941 ZC3H15Q8WU90 426 aaKnown RBP10.89□□□□□ -0.67
NIP7-202ENST00000254941 GPKOWQ92917 476 aaPredicted RBP eCLIP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms