RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 PCDHA12Q9UN75 941 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 M0QZ92 97 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 TBC1D8O95759 1140 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 HS1BP3Q53T59 392 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 NOSTRINQ8IVI9 506 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 CLIC4Q9Y696 253 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 TCOF1Q13428 1488 aaKnown RBP20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 ZNF131P52739 623 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 PGBD1Q96JS3 809 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 MMS19Q96T76 1030 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 ARHGEF10O15013 1369 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 TMTC1Q8IUR5 882 aa20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 MAST1Q9Y2H9 1570 aa20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 GOLGA6CA6NDK9 693 aa20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 GOLGA6DP0CG33 693 aa20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 IFT20Q8IY31 132 aa20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 GOLGA6AQ9NYA3 693 aa20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 KCNJ18B7U540 433 aa20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 KCNJ12Q14500 433 aa20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 RASGRP4Q8TDF6 673 aa20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 CCDC127Q96BQ5 260 aa20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 KDRP35968 1356 aa20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 NDUFAB1O14561 156 aa20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 PDE6BP35913 854 aa20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 SND1Q7KZF4 910 aaKnown RBP eCLIP20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 VPS52Q8N1B4 723 aa20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 K7ENM7 598 aa20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 IFNB1P01574 187 aa20.66■□□□□ 0.9
SMARCC1-201ENST00000254480 FLOT1O75955 427 aa20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 MED10Q9BTT4 135 aa20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 TMEM232C9JQI7 657 aa20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 SYNJ2BP-COX16A0A087WUM0 186 aa20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 LONRF2Q1L5Z9 754 aa20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 CEP85LQ5SZL2 805 aa20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 VPS37BQ9H9H4 285 aa20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 RTEL1Q9NZ71 1219 aa20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 COX16Q9P0S2 106 aa20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 A0A087WWV3 80 aa20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 MORC3Q14149 939 aa20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 SEC31BQ9NQW1 1179 aa20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 STIM2Q9P246 746 aa20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 STK10O94804 968 aaKnown RBP20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 KRT15P19012 456 aa20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 TBC1D31Q96DN5 1066 aa20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 PANK4Q9NVE7 773 aa20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 DDX25Q9UHL0 483 aaKnown RBP20.65■□□□□ 0.9
SMARCC1-201ENST00000254480 DYNLL1P63167 89 aaKnown RBP20.64■□□□□ 0.9
SMARCC1-201ENST00000254480 ICA1Q05084 483 aa20.64■□□□□ 0.9
SMARCC1-201ENST00000254480 CRKLP46109 303 aaKnown RBP20.64■□□□□ 0.89
SMARCC1-201ENST00000254480 UHMK1Q8TAS1 419 aaKnown RBP20.64■□□□□ 0.89
SMARCC1-201ENST00000254480 SSH3Q8TE77 659 aa20.64■□□□□ 0.89
SMARCC1-201ENST00000254480 CHURC1Q8WUH1 139 aa20.64■□□□□ 0.89
SMARCC1-201ENST00000254480 OGFRQ9NZT2 677 aa20.64■□□□□ 0.89
SMARCC1-201ENST00000254480 UNC5CLQ8IV45 518 aa20.64■□□□□ 0.89
SMARCC1-201ENST00000254480 ANKFY1Q9P2R3 1169 aa20.64■□□□□ 0.89
SMARCC1-201ENST00000254480 PTPRTO14522 1441 aa20.64■□□□□ 0.89
SMARCC1-201ENST00000254480 ADCK5Q3MIX3 580 aa20.64■□□□□ 0.89
SMARCC1-201ENST00000254480 ANKRD35Q8N283 1001 aa20.64■□□□□ 0.89
SMARCC1-201ENST00000254480 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.64■□□□□ 0.89
SMARCC1-201ENST00000254480 CCDC89Q8N998 374 aa20.64■□□□□ 0.89
SMARCC1-201ENST00000254480 ANKRD42Q8N9B4 389 aa20.64■□□□□ 0.89
SMARCC1-201ENST00000254480 TRIM37O94972 964 aa20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 XRCC5P13010 732 aaKnown RBP20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 LIG4P49917 911 aa20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 STMN2Q93045 179 aa20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 APOL6Q9BWW8 343 aa20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 AFG3L2Q9Y4W6 797 aa20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 ARHGAP6O43182 974 aa20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 TTC31Q49AM3 519 aaPredicted RBP20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 GKAP1Q5VSY0 366 aaPredicted RBP20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 PI16Q6UXB8 463 aa20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 CARD10Q9BWT7 1032 aa20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 NAA25Q14CX7 972 aa20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 KCTD1Q719H9 257 aa20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 MYOCDQ8IZQ8 938 aa20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 GOLGA8FQ08AF8 430 aa20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 GOLGA8DPQ0D2H9 430 aa20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 OTUD6AQ7L8S5 288 aa20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 ATP8A2Q9NTI2 1148 aa20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 KIAA1468Q9P260 1216 aa20.63■□□□□ 0.89
SMARCC1-201ENST00000254480 GOLGA6BA6NDN3 693 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 NDUFA8P51970 172 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 CACNB1Q02641 598 aaPredicted RBP20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 FBXO11Q86XK2 927 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 LOC102724428A0A0B4J2F2 783 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 GMNNO75496 209 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 POLR2MP0CAP2 368 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 SIK1P57059 783 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 HHATQ5VTY9 493 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 ADALQ6DHV7 355 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 DBNDD1Q9H9R9 158 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 BRD1O95696 1058 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 ATP5DP30049 168 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 SCRN1Q12765 414 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 FYB2Q5VWT5 728 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 ABCC4O15439 1325 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 ZMYM6O95789 1325 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 KCNK3O14649 394 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 SLC16A2P36021 539 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 BAG6P46379 1132 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms