RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 GAS7O60861 476 aa19.07■□□□□ 0.64
ACTN4-201ENST00000252699 TOB2Q14106 344 aaPredicted RBP19.07■□□□□ 0.64
ACTN4-201ENST00000252699 SH3RF3Q8TEJ3 882 aaPredicted RBP19.07■□□□□ 0.64
ACTN4-201ENST00000252699 AIFM3Q96NN9 605 aa19.07■□□□□ 0.64
ACTN4-201ENST00000252699 RICTORQ6R327 1708 aa19.07■□□□□ 0.64
ACTN4-201ENST00000252699 DKC1O60832 514 aaKnown RBP eCLIP19.07■□□□□ 0.64
ACTN4-201ENST00000252699 SETQ01105 290 aaPredicted RBP19.07■□□□□ 0.64
ACTN4-201ENST00000252699 HLTFQ14527 1009 aaKnown RBP eCLIP19.07■□□□□ 0.64
ACTN4-201ENST00000252699 LINC00116Q8NCU8 138 aa19.07■□□□□ 0.64
ACTN4-201ENST00000252699 RASGRP4Q8TDF6 673 aa19.07■□□□□ 0.64
ACTN4-201ENST00000252699 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.07■□□□□ 0.64
ACTN4-201ENST00000252699 ARHGEF28Q8N1W1 1705 aaKnown RBP19.07■□□□□ 0.64
ACTN4-201ENST00000252699 A0A1W2PQ27 194 aa19.07■□□□□ 0.64
ACTN4-201ENST00000252699 A0A1W2PQ64 194 aa19.07■□□□□ 0.64
ACTN4-201ENST00000252699 A0A1W2PQD8 194 aa19.07■□□□□ 0.64
ACTN4-201ENST00000252699 CSF1RP07333 972 aa19.07■□□□□ 0.64
ACTN4-201ENST00000252699 CDK8P49336 464 aa19.07■□□□□ 0.64
ACTN4-201ENST00000252699 NR5A1Q13285 461 aa19.07■□□□□ 0.64
ACTN4-201ENST00000252699 RTKN2Q8IZC4 609 aa19.07■□□□□ 0.64
ACTN4-201ENST00000252699 AMNQ9BXJ7 453 aa19.07■□□□□ 0.64
ACTN4-201ENST00000252699 FTOQ9C0B1 505 aaKnown RBP eCLIP19.07■□□□□ 0.648e-20■■□□□ 11.6
ACTN4-201ENST00000252699 NEBLO76041 1014 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 SEPT7Q16181 437 aaKnown RBP19.06■□□□□ 0.64
ACTN4-201ENST00000252699 USP17L2Q6R6M4 530 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 KRBA2Q6ZNG9 492 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 GUCA1BQ9UMX6 200 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 CYP2D6P10635 497 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 RAPGEF1Q13905 1077 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 TAX1BP1Q86VP1 789 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 SULF1Q8IWU6 871 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 INCENPQ9NQS7 918 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 POLR3EQ9NVU0 708 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 GCOM1H8Y6P7 765 aaPredicted RBP19.06■□□□□ 0.64
ACTN4-201ENST00000252699 POLR2MP0CAP2 368 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 KCTD1Q719H9 257 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 STAG1Q8WVM7 1258 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 NELFBQ8WX92 580 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 RNF216Q9NWF9 866 aaPredicted RBP19.06■□□□□ 0.64
ACTN4-201ENST00000252699 FLOT1O75955 427 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 NCBP1Q09161 790 aaKnown RBP19.06■□□□□ 0.64
ACTN4-201ENST00000252699 TPH2Q8IWU9 490 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 TAB2Q9NYJ8 693 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 FER1L4A9Z1Z3 1794 aa19.06■□□□□ 0.64
ACTN4-201ENST00000252699 CTNNA2P26232 953 aa19.05■□□□□ 0.64
ACTN4-201ENST00000252699 DALRD3Q5D0E6 543 aaKnown RBP19.05■□□□□ 0.64
ACTN4-201ENST00000252699 NELFCDQ8IXH7 590 aa19.05■□□□□ 0.64
ACTN4-201ENST00000252699 CGNQ9P2M7 1197 aaKnown RBP19.05■□□□□ 0.64
ACTN4-201ENST00000252699 PLEKHG2Q9H7P9 1386 aa19.05■□□□□ 0.64
ACTN4-201ENST00000252699 PXDNLA1KZ92 1463 aa19.05■□□□□ 0.64
ACTN4-201ENST00000252699 NOP56O00567 594 aaKnown RBP19.05■□□□□ 0.64
ACTN4-201ENST00000252699 TUBB4AP04350 444 aa19.05■□□□□ 0.64
ACTN4-201ENST00000252699 SLC16A2P36021 539 aa19.05■□□□□ 0.64
ACTN4-201ENST00000252699 POTEB2H3BUK9 544 aa19.05■□□□□ 0.64
ACTN4-201ENST00000252699 SF3B3Q15393 1217 aaKnown RBP19.05■□□□□ 0.64
ACTN4-201ENST00000252699 MYCT1Q8N699 235 aa19.05■□□□□ 0.64
ACTN4-201ENST00000252699 RCOR1Q9UKL0 485 aa19.05■□□□□ 0.64
ACTN4-201ENST00000252699 SLIT1O75093 1534 aa19.05■□□□□ 0.64
ACTN4-201ENST00000252699 MMP1P03956 469 aa19.04■□□□□ 0.64
ACTN4-201ENST00000252699 HARSP12081 509 aaKnown RBP19.04■□□□□ 0.64
ACTN4-201ENST00000252699 ZNF827Q17R98 1081 aa19.04■□□□□ 0.64
ACTN4-201ENST00000252699 DGKHQ86XP1 1220 aa19.04■□□□□ 0.64
ACTN4-201ENST00000252699 ABCC12Q96J65 1359 aa19.04■□□□□ 0.64
ACTN4-201ENST00000252699 ERCC3P19447 782 aa19.04■□□□□ 0.64
ACTN4-201ENST00000252699 TRAPPC10P48553 1259 aa19.04■□□□□ 0.64
ACTN4-201ENST00000252699 PODNQ7Z5L7 613 aa19.04■□□□□ 0.64
ACTN4-201ENST00000252699 IFT74Q96LB3 600 aa19.04■□□□□ 0.64
ACTN4-201ENST00000252699 GSTTP1A0A1W2PQM5 241 aa19.04■□□□□ 0.64
ACTN4-201ENST00000252699 TMED8Q6PL24 325 aaPredicted RBP19.04■□□□□ 0.64
ACTN4-201ENST00000252699 NLRX1Q86UT6 975 aa19.04■□□□□ 0.64
ACTN4-201ENST00000252699 PIGSQ96S52 555 aa19.04■□□□□ 0.64
ACTN4-201ENST00000252699 SYNCQ9H7C4 482 aa19.04■□□□□ 0.64
ACTN4-201ENST00000252699 DDX25Q9UHL0 483 aaKnown RBP19.04■□□□□ 0.64
ACTN4-201ENST00000252699 PCDHA4Q9UN74 947 aa19.04■□□□□ 0.64
ACTN4-201ENST00000252699 USP42Q9H9J4 1324 aaKnown RBP19.04■□□□□ 0.64
ACTN4-201ENST00000252699 CACNB3P54284 484 aa19.04■□□□□ 0.64
ACTN4-201ENST00000252699 SYMPKQ92797 1274 aaKnown RBP19.04■□□□□ 0.64
ACTN4-201ENST00000252699 CWC15Q9P013 229 aaKnown RBP19.04■□□□□ 0.64
ACTN4-201ENST00000252699 CTAGE9A4FU28 777 aa19.03■□□□□ 0.64
ACTN4-201ENST00000252699 LINC00301Q8NCQ3 95 aa19.03■□□□□ 0.64
ACTN4-201ENST00000252699 SMCR8Q8TEV9 937 aaPredicted RBP19.03■□□□□ 0.64
ACTN4-201ENST00000252699 DCP1AQ9NPI6 582 aaPredicted RBP19.03■□□□□ 0.64
ACTN4-201ENST00000252699 MEGF6O75095 1541 aa19.03■□□□□ 0.64
ACTN4-201ENST00000252699 CTAGE15A4D2H0 777 aa19.03■□□□□ 0.64
ACTN4-201ENST00000252699 PRPF3O43395 683 aaKnown RBP19.03■□□□□ 0.64
ACTN4-201ENST00000252699 CTAGE8P0CG41 777 aa19.03■□□□□ 0.64
ACTN4-201ENST00000252699 GPSM2P81274 684 aa19.03■□□□□ 0.64
ACTN4-201ENST00000252699 CTAGE6Q86UF2 777 aa19.03■□□□□ 0.64
ACTN4-201ENST00000252699 CTAGE4Q8IX94 777 aa19.03■□□□□ 0.64
ACTN4-201ENST00000252699 DCPSQ96C86 337 aaKnown RBP19.03■□□□□ 0.64
ACTN4-201ENST00000252699 KDM3AQ9Y4C1 1321 aa19.03■□□□□ 0.64
ACTN4-201ENST00000252699 ARHGAP23Q9P227 1491 aa19.03■□□□□ 0.64
ACTN4-201ENST00000252699 ANKRD62A6NC57 917 aa19.03■□□□□ 0.64
ACTN4-201ENST00000252699 CKAP4Q07065 602 aaKnown RBP19.03■□□□□ 0.64
ACTN4-201ENST00000252699 PAGR1Q9BTK6 254 aa19.03■□□□□ 0.64
ACTN4-201ENST00000252699 COL3A1P02461 1466 aaPredicted RBP19.03■□□□□ 0.64
ACTN4-201ENST00000252699 FOSP01100 380 aaPredicted RBP19.03■□□□□ 0.64
ACTN4-201ENST00000252699 CIAPIN1Q6FI81 312 aa19.03■□□□□ 0.64
ACTN4-201ENST00000252699 NEDD4P46934 1319 aa19.03■□□□□ 0.64
ACTN4-201ENST00000252699 TESPA1A2RU30 521 aaPredicted RBP19.02■□□□□ 0.64
ACTN4-201ENST00000252699 CALUO43852 315 aaPredicted RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms