RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.11■■□□□ 1.61
HCFC1R1-201ENST00000248089 DIAPH3Q9NSV4 1193 aa25.11■■□□□ 1.61
HCFC1R1-201ENST00000248089 MTMR4Q9NYA4 1195 aa25.11■■□□□ 1.61
HCFC1R1-201ENST00000248089 LAMA4Q16363 1823 aa25.1■■□□□ 1.61
HCFC1R1-201ENST00000248089 NDUFB10O96000 172 aa25.1■■□□□ 1.61
HCFC1R1-201ENST00000248089 XRCC5P13010 732 aaKnown RBP25.1■■□□□ 1.61
HCFC1R1-201ENST00000248089 PTPREP23469 700 aa25.1■■□□□ 1.61
HCFC1R1-201ENST00000248089 MAP2K5Q13163 448 aa25.1■■□□□ 1.61
HCFC1R1-201ENST00000248089 CCL14Q16627 93 aa25.1■■□□□ 1.61
HCFC1R1-201ENST00000248089 NEDD1Q8NHV4 660 aa25.1■■□□□ 1.61
HCFC1R1-201ENST00000248089 INCENPQ9NQS7 918 aa25.1■■□□□ 1.61
HCFC1R1-201ENST00000248089 SLC15A5A6NIM6 579 aa25.09■■□□□ 1.61
HCFC1R1-201ENST00000248089 TSPY2A6NKD2 308 aa25.09■■□□□ 1.61
HCFC1R1-201ENST00000248089 F5H6K3 240 aa25.09■■□□□ 1.61
HCFC1R1-201ENST00000248089 TTLL1O95922 423 aa25.09■■□□□ 1.61
HCFC1R1-201ENST00000248089 PDE4AP27815 886 aa25.09■■□□□ 1.61
HCFC1R1-201ENST00000248089 KLRC3Q07444 240 aa25.09■■□□□ 1.61
HCFC1R1-201ENST00000248089 ALX1Q15699 326 aa25.09■■□□□ 1.61
HCFC1R1-201ENST00000248089 TRMT44Q8IYL2 757 aaKnown RBP25.09■■□□□ 1.61
HCFC1R1-201ENST00000248089 PAK6Q9NQU5 681 aaPredicted RBP25.09■■□□□ 1.61
HCFC1R1-201ENST00000248089 TOMM22Q9NS69 142 aa25.09■■□□□ 1.61
HCFC1R1-201ENST00000248089 PPP1R9AQ9ULJ8 1098 aa25.09■■□□□ 1.61
HCFC1R1-201ENST00000248089 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.09■■□□□ 1.61
HCFC1R1-201ENST00000248089 ZNFX1Q9P2E3 1918 aaKnown RBP25.08■■□□□ 1.61
HCFC1R1-201ENST00000248089 RANBP6O60518 1105 aaKnown RBP25.08■■□□□ 1.61
HCFC1R1-201ENST00000248089 SGPL1O95470 568 aa25.08■■□□□ 1.61
HCFC1R1-201ENST00000248089 FGAP02671 866 aa25.08■■□□□ 1.61
HCFC1R1-201ENST00000248089 HSPD1P10809 573 aaKnown RBP25.08■■□□□ 1.61
HCFC1R1-201ENST00000248089 PRKAR2AP13861 404 aaKnown RBP25.08■■□□□ 1.61
HCFC1R1-201ENST00000248089 ERCC3P19447 782 aa25.08■■□□□ 1.61
HCFC1R1-201ENST00000248089 MFAP1P55081 439 aaKnown RBP25.08■■□□□ 1.61
HCFC1R1-201ENST00000248089 PRPF38BQ5VTL8 546 aaKnown RBP25.08■■□□□ 1.61
HCFC1R1-201ENST00000248089 CWC27Q6UX04 472 aaKnown RBP25.08■■□□□ 1.61
HCFC1R1-201ENST00000248089 NCAPG2Q86XI2 1143 aa25.08■■□□□ 1.61
HCFC1R1-201ENST00000248089 HMX1Q9NP08 348 aaPredicted RBP25.08■■□□□ 1.61
HCFC1R1-201ENST00000248089 ANAPC4Q9UJX5 808 aa25.08■■□□□ 1.61
HCFC1R1-201ENST00000248089 RPTORQ8N122 1335 aa25.08■■□□□ 1.6
HCFC1R1-201ENST00000248089 TFRCP02786 760 aaKnown RBP25.07■■□□□ 1.6
HCFC1R1-201ENST00000248089 GRB14Q14449 540 aa25.07■■□□□ 1.6
HCFC1R1-201ENST00000248089 TMEM132BQ14DG7 1078 aa25.07■■□□□ 1.6
HCFC1R1-201ENST00000248089 SHCBP1Q8NEM2 672 aa25.07■■□□□ 1.6
HCFC1R1-201ENST00000248089 SLF1Q9BQI6 1058 aa25.07■■□□□ 1.6
HCFC1R1-201ENST00000248089 ISY1Q9ULR0 285 aaKnown RBP25.07■■□□□ 1.6
HCFC1R1-201ENST00000248089 FARP2O94887 1054 aaPredicted RBP25.06■■□□□ 1.6
HCFC1R1-201ENST00000248089 HAND2P61296 217 aa25.06■■□□□ 1.6
HCFC1R1-201ENST00000248089 RRP12Q5JTH9 1297 aaKnown RBP25.06■■□□□ 1.6
HCFC1R1-201ENST00000248089 TACC3Q9Y6A5 838 aa25.06■■□□□ 1.6
HCFC1R1-201ENST00000248089 ZMYM6O95789 1325 aa25.06■■□□□ 1.6
HCFC1R1-201ENST00000248089 FRMPD3Q5JV73 1810 aa25.05■■□□□ 1.6
HCFC1R1-201ENST00000248089 HIP1O00291 1037 aa25.05■■□□□ 1.6
HCFC1R1-201ENST00000248089 VWA5AO00534 786 aa25.05■■□□□ 1.6
HCFC1R1-201ENST00000248089 MKL1Q969V6 931 aa25.05■■□□□ 1.6
HCFC1R1-201ENST00000248089 CHMP4CQ96CF2 233 aa25.05■■□□□ 1.6
HCFC1R1-201ENST00000248089 STX8Q9UNK0 236 aa25.05■■□□□ 1.6
HCFC1R1-201ENST00000248089 PLXNA1Q9UIW2 1896 aa25.04■■□□□ 1.6
HCFC1R1-201ENST00000248089 NMT2O60551 498 aa25.04■■□□□ 1.6
HCFC1R1-201ENST00000248089 ADORA2AP29274 412 aa25.04■■□□□ 1.6
HCFC1R1-201ENST00000248089 CACNB2Q08289 660 aaPredicted RBP25.04■■□□□ 1.6
HCFC1R1-201ENST00000248089 TTC22Q5TAA0 569 aa25.04■■□□□ 1.6
HCFC1R1-201ENST00000248089 MAP3K21Q5TCX8 1036 aa25.04■■□□□ 1.6
HCFC1R1-201ENST00000248089 DPP9Q86TI2 863 aa25.04■■□□□ 1.6
HCFC1R1-201ENST00000248089 GMCL1P1Q8NEA9 526 aa25.04■■□□□ 1.6
HCFC1R1-201ENST00000248089 MROH8Q9H579 483 aa25.04■■□□□ 1.6
HCFC1R1-201ENST00000248089 FLRT1Q9NZU1 646 aa25.04■■□□□ 1.6
HCFC1R1-201ENST00000248089 SYNPO2Q9UMS6 1093 aa25.04■■□□□ 1.6
HCFC1R1-201ENST00000248089 ADAMTS5Q9UNA0 930 aa25.04■■□□□ 1.6
HCFC1R1-201ENST00000248089 ORC4O43929 436 aa25.03■■□□□ 1.6
HCFC1R1-201ENST00000248089 SLFN13Q68D06 897 aa25.03■■□□□ 1.6
HCFC1R1-201ENST00000248089 NPLOC4Q8TAT6 608 aa25.03■■□□□ 1.6
HCFC1R1-201ENST00000248089 STRNO43815 780 aa25.02■■□□□ 1.6
HCFC1R1-201ENST00000248089 SLC25A27O95847 323 aa25.02■■□□□ 1.6
HCFC1R1-201ENST00000248089 GSPT1P15170 499 aaKnown RBP25.02■■□□□ 1.6
HCFC1R1-201ENST00000248089 PPP4R3BQ5MIZ7 849 aa25.02■■□□□ 1.6
HCFC1R1-201ENST00000248089 MFSD14CQ5VZR4 134 aa25.02■■□□□ 1.6
HCFC1R1-201ENST00000248089 KIFC2Q96AC6 838 aa25.02■■□□□ 1.6
HCFC1R1-201ENST00000248089 CRISPLD2Q9H0B8 497 aa25.02■■□□□ 1.6
HCFC1R1-201ENST00000248089 IL17RBQ9NRM6 502 aa25.02■■□□□ 1.6
HCFC1R1-201ENST00000248089 CTDP1Q9Y5B0 961 aaPredicted RBP25.02■■□□□ 1.6
HCFC1R1-201ENST00000248089 HOXC6P09630 235 aa25.01■■□□□ 1.59
HCFC1R1-201ENST00000248089 CCND3P30281 292 aaPredicted RBP25.01■■□□□ 1.59
HCFC1R1-201ENST00000248089 STAT3P40763 770 aa25.01■■□□□ 1.59
HCFC1R1-201ENST00000248089 RIOX2Q8IUF8 465 aa25.01■■□□□ 1.59
HCFC1R1-201ENST00000248089 PRPF38AQ8NAV1 312 aaKnown RBP25.01■■□□□ 1.59
HCFC1R1-201ENST00000248089 ZNF214Q9UL59 606 aaPredicted RBP25.01■■□□□ 1.59
HCFC1R1-201ENST00000248089 MTMR7Q9Y216 660 aa25.01■■□□□ 1.59
HCFC1R1-201ENST00000248089 FCER1AP12319 257 aa25■■□□□ 1.59
HCFC1R1-201ENST00000248089 BMP3P12645 472 aa25■■□□□ 1.59
HCFC1R1-201ENST00000248089 UBE2Q1Q7Z7E8 422 aa25■■□□□ 1.59
HCFC1R1-201ENST00000248089 TBC1D10CQ8IV04 446 aa25■■□□□ 1.59
HCFC1R1-201ENST00000248089 REPS2Q8NFH8 660 aa25■■□□□ 1.59
HCFC1R1-201ENST00000248089 FEM1BQ9UK73 627 aa25■■□□□ 1.59
HCFC1R1-201ENST00000248089 FGRP09769 529 aa24.99■■□□□ 1.59
HCFC1R1-201ENST00000248089 SLC4A3P48751 1232 aa24.99■■□□□ 1.59
HCFC1R1-201ENST00000248089 IKQ13123 557 aaPredicted RBP24.99■■□□□ 1.59
HCFC1R1-201ENST00000248089 SNRNP48Q6IEG0 339 aaKnown RBP24.99■■□□□ 1.59
HCFC1R1-201ENST00000248089 MFSD6Q6ZSS7 791 aa24.99■■□□□ 1.59
HCFC1R1-201ENST00000248089 MMP19Q99542 508 aa24.99■■□□□ 1.59
HCFC1R1-201ENST00000248089 NBPF3Q9H094 633 aa24.99■■□□□ 1.59
HCFC1R1-201ENST00000248089 COBLO75128 1261 aa24.98■■□□□ 1.59
HCFC1R1-201ENST00000248089 ZBED4O75132 1171 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms