RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 JMYQ8N9B5 988 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 DAGLBQ8NCG7 672 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 BARHL2Q9NY43 387 aa16.34■□□□□ 0.21
SDF2-201ENST00000247020 SPTLC2O15270 562 aa16.33■□□□□ 0.2
SDF2-201ENST00000247020 PPP6R2O75170 966 aa16.33■□□□□ 0.2
SDF2-201ENST00000247020 SEPT2Q15019 361 aa16.33■□□□□ 0.2
SDF2-201ENST00000247020 SLC39A14Q15043 492 aa16.33■□□□□ 0.2
SDF2-201ENST00000247020 SLC35G1Q2M3R5 365 aa16.33■□□□□ 0.2
SDF2-201ENST00000247020 ADALQ6DHV7 355 aa16.33■□□□□ 0.2
SDF2-201ENST00000247020 SHISA4Q96DD7 197 aa16.33■□□□□ 0.2
SDF2-201ENST00000247020 PGBD1Q96JS3 809 aa16.33■□□□□ 0.2
SDF2-201ENST00000247020 TMEM39BQ9GZU3 492 aa16.33■□□□□ 0.2
SDF2-201ENST00000247020 SEC63Q9UGP8 760 aaKnown RBP16.33■□□□□ 0.2
SDF2-201ENST00000247020 A0A1W2PQ27 194 aa16.32■□□□□ 0.2
SDF2-201ENST00000247020 A0A1W2PQ64 194 aa16.32■□□□□ 0.2
SDF2-201ENST00000247020 A0A1W2PQD8 194 aa16.32■□□□□ 0.2
SDF2-201ENST00000247020 SHTN1A0MZ66 631 aa16.32■□□□□ 0.2
SDF2-201ENST00000247020 GOLGA8HP0CJ92 632 aa16.32■□□□□ 0.2
SDF2-201ENST00000247020 NLRP5P59047 1200 aa16.32■□□□□ 0.2
SDF2-201ENST00000247020 NPY5RQ15761 445 aa16.32■□□□□ 0.2
SDF2-201ENST00000247020 APOBEC3FQ8IUX4 373 aaKnown RBP16.32■□□□□ 0.2
SDF2-201ENST00000247020 HOOK2Q96ED9 719 aa16.32■□□□□ 0.2
SDF2-201ENST00000247020 ARHGEF10LQ9HCE6 1279 aa16.32■□□□□ 0.2
SDF2-201ENST00000247020 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.32■□□□□ 0.2
SDF2-201ENST00000247020 DDX19AQ9NUU7 478 aaKnown RBP16.32■□□□□ 0.2
SDF2-201ENST00000247020 GPRC5DQ9NZD1 345 aa16.32■□□□□ 0.2
SDF2-201ENST00000247020 CEP131Q9UPN4 1083 aa16.32■□□□□ 0.2
SDF2-201ENST00000247020 CLIC4Q9Y696 253 aa16.32■□□□□ 0.2
SDF2-201ENST00000247020 hCG_1642624A0A1W2PR95 340 aa16.31■□□□□ 0.2
SDF2-201ENST00000247020 GDF11O95390 407 aa16.31■□□□□ 0.2
SDF2-201ENST00000247020 BMP15O95972 392 aa16.31■□□□□ 0.2
SDF2-201ENST00000247020 GH2P01242 217 aa16.31■□□□□ 0.2
SDF2-201ENST00000247020 SLURP2P0DP57 97 aa16.31■□□□□ 0.2
SDF2-201ENST00000247020 TRAPPC10P48553 1259 aa16.31■□□□□ 0.2
SDF2-201ENST00000247020 CEBPZQ03701 1054 aaKnown RBP16.31■□□□□ 0.2
SDF2-201ENST00000247020 RASA3Q14644 834 aa16.31■□□□□ 0.2
SDF2-201ENST00000247020 SF3A1Q15459 793 aaKnown RBP16.31■□□□□ 0.2
SDF2-201ENST00000247020 CLEC10AQ8IUN9 316 aa16.31■□□□□ 0.2
SDF2-201ENST00000247020 TNFRSF25Q93038 417 aa16.31■□□□□ 0.2
SDF2-201ENST00000247020 GMCL1Q96IK5 515 aa16.31■□□□□ 0.2
SDF2-201ENST00000247020 FTOQ9C0B1 505 aaKnown RBP eCLIP16.31■□□□□ 0.2
SDF2-201ENST00000247020 NOL7Q9UMY1 257 aaKnown RBP16.31■□□□□ 0.2
SDF2-201ENST00000247020 PCDHA4Q9UN74 947 aa16.31■□□□□ 0.2
SDF2-201ENST00000247020 MTMR7Q9Y216 660 aa16.31■□□□□ 0.2
SDF2-201ENST00000247020 DOCK1Q14185 1865 aa16.31■□□□□ 0.2
SDF2-201ENST00000247020 ESYT2A0FGR8 921 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 FSD2A1L4K1 749 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 STXBP3O00186 592 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 CAP2P40123 477 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 ME1P48163 572 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 ATP2B2Q01814 1243 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 NR5A1Q13285 461 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 WWC2Q6AWC2 1192 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 PPP1R18Q6NYC8 613 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 SAMD7Q7Z3H4 446 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 SIAH1Q8IUQ4 282 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 BLIDQ8IZY5 108 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 BICD2Q8TD16 824 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 MTMR8Q96EF0 704 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 TEPSINQ96N21 525 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 ZMYND12Q9H0C1 365 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 SH2D4AQ9H788 454 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 HACL1Q9UJ83 578 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 ZBTB21Q9ULJ3 1066 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 PPP2R3BQ9Y5P8 575 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 GOLGA6L3A6NEY3 463 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 EGFRP00533 1210 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 RRP1BQ14684 758 aaKnown RBP16.3■□□□□ 0.2
SDF2-201ENST00000247020 PTPAQ15257 358 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 TBC1D10BQ4KMP7 808 aaPredicted RBP16.3■□□□□ 0.2
SDF2-201ENST00000247020 L1TD1Q5T7N2 865 aaKnown RBP16.3■□□□□ 0.2
SDF2-201ENST00000247020 SLFN13Q68D06 897 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 LRSAM1Q6UWE0 723 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 OXER1Q8TDS5 423 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 PCDHA7Q9UN72 937 aa16.3■□□□□ 0.2
SDF2-201ENST00000247020 FRMPD2Q68DX3 1309 aaPredicted RBP16.29■□□□□ 0.2
SDF2-201ENST00000247020 PITPNM2Q9BZ72 1349 aa16.29■□□□□ 0.2
SDF2-201ENST00000247020 ASNSP08243 561 aa16.29■□□□□ 0.2
SDF2-201ENST00000247020 GNA11P29992 359 aa16.29■□□□□ 0.2
SDF2-201ENST00000247020 SLC1A4P43007 532 aa16.29■□□□□ 0.2
SDF2-201ENST00000247020 CCDC96Q2M329 555 aa16.29■□□□□ 0.2
SDF2-201ENST00000247020 RASGRP2Q7LDG7 609 aa16.29■□□□□ 0.2
SDF2-201ENST00000247020 PIGSQ96S52 555 aa16.29■□□□□ 0.2
SDF2-201ENST00000247020 TMX2Q9Y320 296 aa16.29■□□□□ 0.2
SDF2-201ENST00000247020 ZC3H4Q9UPT8 1303 aaKnown RBP16.28■□□□□ 0.2
SDF2-201ENST00000247020 PNMA6FA0A0J9YX94 578 aa16.28■□□□□ 0.2
SDF2-201ENST00000247020 F5H6K3 240 aa16.28■□□□□ 0.2
SDF2-201ENST00000247020 M0R2N6 131 aa16.28■□□□□ 0.2
SDF2-201ENST00000247020 TOB1P50616 345 aaPredicted RBP16.28■□□□□ 0.2
SDF2-201ENST00000247020 KLRC3Q07444 240 aa16.28■□□□□ 0.2
SDF2-201ENST00000247020 DCAF15Q66K64 600 aa16.28■□□□□ 0.2
SDF2-201ENST00000247020 CCDC73Q6ZRK6 1079 aa16.28■□□□□ 0.2
SDF2-201ENST00000247020 HEATR3Q7Z4Q2 680 aa16.28■□□□□ 0.2
SDF2-201ENST00000247020 MRPS27Q92552 414 aaKnown RBP16.28■□□□□ 0.2
SDF2-201ENST00000247020 GPKOWQ92917 476 aaPredicted RBP eCLIP16.28■□□□□ 0.2
SDF2-201ENST00000247020 GOPCQ9HD26 462 aa16.28■□□□□ 0.2
SDF2-201ENST00000247020 C6orf50Q9HD87 102 aa16.28■□□□□ 0.2
SDF2-201ENST00000247020 LIG1P18858 919 aa16.27■□□□□ 0.2
SDF2-201ENST00000247020 NAPAP54920 295 aa16.27■□□□□ 0.2
SDF2-201ENST00000247020 JAG1P78504 1218 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms