RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 APOBEC3FQ8IUX4 373 aaKnown RBP21.57■■□□□ 1.04
TNFSF9-201ENST00000245817 USP28Q96RU2 1077 aa21.57■■□□□ 1.04
TNFSF9-201ENST00000245817 SH3GLB2Q9NR46 395 aa21.57■■□□□ 1.04
TNFSF9-201ENST00000245817 ZNF543Q08ER8 600 aa21.56■■□□□ 1.04
TNFSF9-201ENST00000245817 DEFB129Q9H1M3 183 aa21.56■■□□□ 1.04
TNFSF9-201ENST00000245817 ARHGEF10LQ9HCE6 1279 aa21.56■■□□□ 1.04
TNFSF9-201ENST00000245817 VAT1LQ9HCJ6 419 aa21.56■■□□□ 1.04
TNFSF9-201ENST00000245817 GPCPD1Q9NPB8 672 aa21.56■■□□□ 1.04
TNFSF9-201ENST00000245817 RTEL1Q9NZ71 1219 aa21.56■■□□□ 1.04
TNFSF9-201ENST00000245817 RCOR1Q9UKL0 485 aa21.56■■□□□ 1.04
TNFSF9-201ENST00000245817 CYTH3O43739 400 aa21.56■■□□□ 1.04
TNFSF9-201ENST00000245817 CALML3P27482 149 aa21.56■■□□□ 1.04
TNFSF9-201ENST00000245817 SF3A1Q15459 793 aaKnown RBP21.56■■□□□ 1.04
TNFSF9-201ENST00000245817 SHROOM1Q2M3G4 852 aaPredicted RBP21.56■■□□□ 1.04
TNFSF9-201ENST00000245817 RASGRP2Q7LDG7 609 aa21.56■■□□□ 1.04
TNFSF9-201ENST00000245817 CCDC148Q8NFR7 591 aa21.56■■□□□ 1.04
TNFSF9-201ENST00000245817 DCAF4Q8WV16 495 aa21.56■■□□□ 1.04
TNFSF9-201ENST00000245817 HOOK2Q96ED9 719 aa21.56■■□□□ 1.04
TNFSF9-201ENST00000245817 TCHHQ07283 1943 aa21.55■■□□□ 1.04
TNFSF9-201ENST00000245817 SLC1A4P43007 532 aa21.55■■□□□ 1.04
TNFSF9-201ENST00000245817 STK38Q15208 465 aa21.55■■□□□ 1.04
TNFSF9-201ENST00000245817 SLFN13Q68D06 897 aa21.55■■□□□ 1.04
TNFSF9-201ENST00000245817 HEATR3Q7Z4Q2 680 aa21.55■■□□□ 1.04
TNFSF9-201ENST00000245817 CCDC12Q8WUD4 166 aaPredicted RBP21.55■■□□□ 1.04
TNFSF9-201ENST00000245817 UBA5Q9GZZ9 404 aa21.55■■□□□ 1.04
TNFSF9-201ENST00000245817 POLR3EQ9NVU0 708 aa21.55■■□□□ 1.04
TNFSF9-201ENST00000245817 PGAP2Q9UHJ9 254 aa21.55■■□□□ 1.04
TNFSF9-201ENST00000245817 SYNPO2Q9UMS6 1093 aa21.55■■□□□ 1.04
TNFSF9-201ENST00000245817 SCAF8Q9UPN6 1271 aaKnown RBP21.55■■□□□ 1.04
TNFSF9-201ENST00000245817 EPS15P42566 896 aa21.54■■□□□ 1.04
TNFSF9-201ENST00000245817 MAP3K10Q02779 954 aa21.54■■□□□ 1.04
TNFSF9-201ENST00000245817 RRP1BQ14684 758 aaKnown RBP21.54■■□□□ 1.04
TNFSF9-201ENST00000245817 ANGEL2Q5VTE6 544 aaKnown RBP21.54■■□□□ 1.04
TNFSF9-201ENST00000245817 HOMER1Q86YM7 354 aa21.54■■□□□ 1.04
TNFSF9-201ENST00000245817 CDAN1Q8IWY9 1227 aa21.54■■□□□ 1.04
TNFSF9-201ENST00000245817 FAM177A1Q8N128 213 aaPredicted RBP21.54■■□□□ 1.04
TNFSF9-201ENST00000245817 ZBTB21Q9ULJ3 1066 aa21.54■■□□□ 1.04
TNFSF9-201ENST00000245817 ASTN2O75129 1339 aaPredicted RBP21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 YEATS4O95619 227 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 CAP2P40123 477 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 ANO1Q5XXA6 986 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 GMCL1P1Q8NEA9 526 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 TRPM4Q8TD43 1214 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 KCNG4Q8TDN1 519 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 FTOQ9C0B1 505 aaKnown RBP eCLIP21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 CPVLQ9H3G5 476 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 RIOX1Q9H6W3 641 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 GREB1LQ9C091 1923 aaPredicted RBP21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 F5H6K3 240 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 ASNSP08243 561 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 KLRC3Q07444 240 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 RILPL1Q5EBL4 403 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 DCAF15Q66K64 600 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 SIAH1Q8IUQ4 282 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 GPKOWQ92917 476 aaPredicted RBP eCLIP21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 TEPSINQ96N21 525 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 BARHL2Q9NY43 387 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 CLIC4Q9Y696 253 aa21.53■■□□□ 1.04
TNFSF9-201ENST00000245817 hCG_1984214I3L0E3 225 aa21.52■■□□□ 1.04
TNFSF9-201ENST00000245817 ME1P48163 572 aa21.52■■□□□ 1.04
TNFSF9-201ENST00000245817 NASPP49321 788 aaPredicted RBP21.52■■□□□ 1.04
TNFSF9-201ENST00000245817 JAG1P78504 1218 aa21.52■■□□□ 1.04
TNFSF9-201ENST00000245817 NR5A1Q13285 461 aa21.52■■□□□ 1.04
TNFSF9-201ENST00000245817 GALNT17Q6IS24 598 aa21.52■■□□□ 1.04
TNFSF9-201ENST00000245817 KCTD1Q719H9 257 aa21.52■■□□□ 1.04
TNFSF9-201ENST00000245817 ZNF713Q8N859 430 aaPredicted RBP21.52■■□□□ 1.04
TNFSF9-201ENST00000245817 LINC00301Q8NCQ3 95 aa21.52■■□□□ 1.04
TNFSF9-201ENST00000245817 BICD2Q8TD16 824 aa21.52■■□□□ 1.04
TNFSF9-201ENST00000245817 OXER1Q8TDS5 423 aa21.52■■□□□ 1.04
TNFSF9-201ENST00000245817 SH2D4AQ9H788 454 aa21.52■■□□□ 1.04
TNFSF9-201ENST00000245817 MYH6P13533 1939 aa21.52■■□□□ 1.04
TNFSF9-201ENST00000245817 SLC35G1Q2M3R5 365 aa21.51■■□□□ 1.03
TNFSF9-201ENST00000245817 WWC2Q6AWC2 1192 aa21.51■■□□□ 1.03
TNFSF9-201ENST00000245817 PIGSQ96S52 555 aa21.51■■□□□ 1.03
TNFSF9-201ENST00000245817 GOPCQ9HD26 462 aa21.51■■□□□ 1.03
TNFSF9-201ENST00000245817 ADARB2Q9NS39 739 aaKnown RBP21.51■■□□□ 1.03
TNFSF9-201ENST00000245817 GGA3Q9NZ52 723 aa21.51■■□□□ 1.03
TNFSF9-201ENST00000245817 NOL7Q9UMY1 257 aaKnown RBP21.51■■□□□ 1.03
TNFSF9-201ENST00000245817 SPTLC2O15270 562 aa21.5■■□□□ 1.03
TNFSF9-201ENST00000245817 NAPAP54920 295 aa21.5■■□□□ 1.03
TNFSF9-201ENST00000245817 JMYQ8N9B5 988 aa21.5■■□□□ 1.03
TNFSF9-201ENST00000245817 GMCL1Q96IK5 515 aa21.5■■□□□ 1.03
TNFSF9-201ENST00000245817 L3MBTL3Q96JM7 780 aaPredicted RBP21.5■■□□□ 1.03
TNFSF9-201ENST00000245817 GINM1Q9NU53 330 aa21.5■■□□□ 1.03
TNFSF9-201ENST00000245817 PPP2R3BQ9Y5P8 575 aa21.5■■□□□ 1.03
TNFSF9-201ENST00000245817 STXBP3O00186 592 aa21.5■■□□□ 1.03
TNFSF9-201ENST00000245817 VEGFAP15692 232 aaPredicted RBP21.5■■□□□ 1.03
TNFSF9-201ENST00000245817 IKQ13123 557 aaPredicted RBP21.5■■□□□ 1.03
TNFSF9-201ENST00000245817 ADGRF4Q8IZF3 695 aa21.5■■□□□ 1.03
TNFSF9-201ENST00000245817 BLIDQ8IZY5 108 aa21.5■■□□□ 1.03
TNFSF9-201ENST00000245817 SHISA4Q96DD7 197 aa21.5■■□□□ 1.03
TNFSF9-201ENST00000245817 PCDHA4Q9UN74 947 aa21.5■■□□□ 1.03
TNFSF9-201ENST00000245817 NDUFB10O96000 172 aa21.49■■□□□ 1.03
TNFSF9-201ENST00000245817 TTBK2Q6IQ55 1244 aa21.49■■□□□ 1.03
TNFSF9-201ENST00000245817 C6orf50Q9HD87 102 aa21.49■■□□□ 1.03
TNFSF9-201ENST00000245817 CEP131Q9UPN4 1083 aa21.49■■□□□ 1.03
TNFSF9-201ENST00000245817 TMX2Q9Y320 296 aa21.49■■□□□ 1.03
TNFSF9-201ENST00000245817 PNMA6FA0A0J9YX94 578 aa21.48■■□□□ 1.03
TNFSF9-201ENST00000245817 CTNND1O60716 968 aaKnown RBP21.48■■□□□ 1.03
TNFSF9-201ENST00000245817 BMP3P12645 472 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms