RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 ABCB5Q2M3G0 1257 aa20.65■□□□□ 0.9
KLHDC3-201ENST00000244670 ANP32BQ92688 251 aaKnown RBP20.65■□□□□ 0.9
KLHDC3-201ENST00000244670 LZTS2Q9BRK4 669 aa20.65■□□□□ 0.9
KLHDC3-201ENST00000244670 UBA5Q9GZZ9 404 aa20.65■□□□□ 0.9
KLHDC3-201ENST00000244670 RAD21O60216 631 aa20.65■□□□□ 0.9
KLHDC3-201ENST00000244670 YEATS4O95619 227 aa20.65■□□□□ 0.9
KLHDC3-201ENST00000244670 EEF2P13639 858 aaKnown RBP20.65■□□□□ 0.9
KLHDC3-201ENST00000244670 ZNF280AP59817 542 aaPredicted RBP20.65■□□□□ 0.9
KLHDC3-201ENST00000244670 JAG1P78504 1218 aa20.65■□□□□ 0.9
KLHDC3-201ENST00000244670 SAMD7Q7Z3H4 446 aa20.65■□□□□ 0.9
KLHDC3-201ENST00000244670 HOMER1Q86YM7 354 aa20.65■□□□□ 0.9
KLHDC3-201ENST00000244670 NUP62CLQ9H1M0 184 aa20.65■□□□□ 0.9
KLHDC3-201ENST00000244670 VAT1LQ9HCJ6 419 aa20.65■□□□□ 0.9
KLHDC3-201ENST00000244670 PCDHA7Q9UN72 937 aa20.65■□□□□ 0.9
KLHDC3-201ENST00000244670 FAM205CA6NFA0 338 aa20.64■□□□□ 0.89
KLHDC3-201ENST00000244670 SPTLC2O15270 562 aa20.64■□□□□ 0.89
KLHDC3-201ENST00000244670 NLRP5P59047 1200 aa20.64■□□□□ 0.89
KLHDC3-201ENST00000244670 NPY5RQ15761 445 aa20.64■□□□□ 0.89
KLHDC3-201ENST00000244670 TBC1D10BQ4KMP7 808 aaPredicted RBP20.64■□□□□ 0.89
KLHDC3-201ENST00000244670 SPZ1Q9BXG8 430 aa20.64■□□□□ 0.89
KLHDC3-201ENST00000244670 GPCPD1Q9NPB8 672 aa20.64■□□□□ 0.89
KLHDC3-201ENST00000244670 GH2P01242 217 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 ICA1Q05084 483 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 CAMK4Q16566 473 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 EARS2Q5JPH6 523 aaKnown RBP20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 FKBP1CQ5VVH2 108 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 WWC2Q6AWC2 1192 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 TMEM179Q6ZVK1 233 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 HEATR3Q7Z4Q2 680 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 GOLPH3LQ9H4A5 285 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 KANSL2Q9H9L4 492 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 CABP5Q9NP86 173 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 DDX19AQ9NUU7 478 aaKnown RBP20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 HERC5Q9UII4 1024 aaKnown RBP20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 CNOT7Q9UIV1 285 aaKnown RBP20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 ADAMTS3O15072 1205 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 SNHG28P0DPA3 235 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 ATP2B1P20020 1258 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 MARCKSP29966 332 aaPredicted RBP20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 TOB1P50616 345 aaPredicted RBP20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 NOM1Q5C9Z4 860 aaKnown RBP20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 TYW1BQ6NUM6 668 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 MIGA2Q7L4E1 593 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 CCAR1Q8IX12 1150 aaKnown RBP20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 KCNG4Q8TDN1 519 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 BRMS1Q9HCU9 246 aa20.63■□□□□ 0.89
KLHDC3-201ENST00000244670 CCDC96Q2M329 555 aa20.62■□□□□ 0.89
KLHDC3-201ENST00000244670 ASPRV1Q53RT3 343 aa20.62■□□□□ 0.89
KLHDC3-201ENST00000244670 FAM83AQ86UY5 434 aa20.62■□□□□ 0.89
KLHDC3-201ENST00000244670 PIGSQ96S52 555 aa20.62■□□□□ 0.89
KLHDC3-201ENST00000244670 CLSTN2Q9H4D0 955 aa20.62■□□□□ 0.89
KLHDC3-201ENST00000244670 ASTN2O75129 1339 aaPredicted RBP20.62■□□□□ 0.89
KLHDC3-201ENST00000244670 DICER1Q9UPY3 1922 aaKnown RBP20.61■□□□□ 0.89
KLHDC3-201ENST00000244670 SLC39A14Q15043 492 aa20.61■□□□□ 0.89
KLHDC3-201ENST00000244670 PPP4R3BQ5MIZ7 849 aa20.61■□□□□ 0.89
KLHDC3-201ENST00000244670 KCTD1Q719H9 257 aa20.61■□□□□ 0.89
KLHDC3-201ENST00000244670 SIAH1Q8IUQ4 282 aa20.61■□□□□ 0.89
KLHDC3-201ENST00000244670 DPF2Q92785 391 aa20.61■□□□□ 0.89
KLHDC3-201ENST00000244670 NYAP2Q9P242 653 aa20.61■□□□□ 0.89
KLHDC3-201ENST00000244670 SBF1O95248 1867 aa20.61■□□□□ 0.89
KLHDC3-201ENST00000244670 ZNF543Q08ER8 600 aa20.61■□□□□ 0.89
KLHDC3-201ENST00000244670 PTPAQ15257 358 aa20.61■□□□□ 0.89
KLHDC3-201ENST00000244670 MAP3K11Q16584 847 aa20.61■□□□□ 0.89
KLHDC3-201ENST00000244670 TTBK2Q6IQ55 1244 aa20.61■□□□□ 0.89
KLHDC3-201ENST00000244670 RRP36Q96EU6 259 aaKnown RBP20.61■□□□□ 0.89
KLHDC3-201ENST00000244670 TNMDQ9H2S6 317 aa20.61■□□□□ 0.89
KLHDC3-201ENST00000244670 CCDC173Q0VFZ6 552 aa20.6■□□□□ 0.89
KLHDC3-201ENST00000244670 RILPL1Q5EBL4 403 aa20.6■□□□□ 0.89
KLHDC3-201ENST00000244670 RBM43Q6ZSC3 357 aaKnown RBP20.6■□□□□ 0.89
KLHDC3-201ENST00000244670 SYT17Q9BSW7 474 aa20.6■□□□□ 0.89
KLHDC3-201ENST00000244670 SEC63Q9UGP8 760 aaKnown RBP20.6■□□□□ 0.89
KLHDC3-201ENST00000244670 PCDHB6Q9Y5E3 794 aa20.6■□□□□ 0.89
KLHDC3-201ENST00000244670 STXBP3O00186 592 aa20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 LMNB1P20700 586 aa20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 RASA3Q14644 834 aa20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 FSIP1Q8NA03 581 aa20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 TNFRSF25Q93038 417 aa20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 MKL1Q969V6 931 aa20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 PPP1R9BQ96SB3 815 aa20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 RIOX1Q9H6W3 641 aa20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 SH3GLB2Q9NR46 395 aa20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 BARHL2Q9NY43 387 aa20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 PGAP2Q9UHJ9 254 aa20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 SLC16A2P36021 539 aa20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 TNNI2P48788 182 aa20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 SNW1Q13573 536 aaKnown RBP20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 KIF4BQ2VIQ3 1234 aa20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 ADALQ6DHV7 355 aa20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 CKAP2LQ8IYA6 745 aa20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 TRIM44Q96DX7 344 aaPredicted RBP20.59■□□□□ 0.89
KLHDC3-201ENST00000244670 SMARCA1P28370 1054 aa20.58■□□□□ 0.88
KLHDC3-201ENST00000244670 MMP14P50281 582 aa20.58■□□□□ 0.88
KLHDC3-201ENST00000244670 SLFN13Q68D06 897 aa20.58■□□□□ 0.88
KLHDC3-201ENST00000244670 ILDR2Q71H61 639 aa20.58■□□□□ 0.88
KLHDC3-201ENST00000244670 ENGASEQ8NFI3 743 aa20.58■□□□□ 0.88
KLHDC3-201ENST00000244670 RASGRP4Q8TDF6 673 aa20.58■□□□□ 0.88
KLHDC3-201ENST00000244670 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.58■□□□□ 0.88
KLHDC3-201ENST00000244670 HACL1Q9UJ83 578 aa20.58■□□□□ 0.88
KLHDC3-201ENST00000244670 A0A1B0GVL5 298 aa20.57■□□□□ 0.88
KLHDC3-201ENST00000244670 CALML3P27482 149 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms