RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 CASC4Q6P4E1 433 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 APOBEC3FQ8IUX4 373 aaKnown RBP8.17□□□□□ -1.1
MED28-201ENST00000237380 C1orf112Q9NSG2 853 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 NCKAP5LQ9HCH0 1330 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 BBOX1O75936 387 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 DNAJC8O75937 253 aaPredicted RBP8.17□□□□□ -1.1
MED28-201ENST00000237380 ALCAMQ13740 583 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 IFT20Q8IY31 132 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 ANGPTL3Q9Y5C1 460 aa8.17□□□□□ -1.1
MED28-201ENST00000237380 ZW10O43264 779 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 CERKLQ49MI3 558 aaPredicted RBP8.16□□□□□ -1.1
MED28-201ENST00000237380 CCDC121Q6ZUS5 278 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 NBPF11Q86T75 865 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 TADA2BQ86TJ2 420 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 LARSQ9P2J5 1176 aaKnown RBP8.16□□□□□ -1.1
MED28-201ENST00000237380 SLC13A4Q9UKG4 626 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.16□□□□□ -1.1
MED28-201ENST00000237380 SHROOM2Q13796 1616 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 TMCC1O94876 653 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 SLC4A8Q2Y0W8 1093 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 B4GALNT4Q76KP1 1039 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 HARSP12081 509 aaKnown RBP8.16□□□□□ -1.1
MED28-201ENST00000237380 RECQLP46063 649 aaPredicted RBP8.16□□□□□ -1.1
MED28-201ENST00000237380 KLHL40Q2TBA0 621 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 RNF8O76064 485 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 NEDD9Q14511 834 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 FBXO31Q5XUX0 539 aaPredicted RBP8.16□□□□□ -1.1
MED28-201ENST00000237380 CPLX4Q7Z7G2 160 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 RBM8AQ9Y5S9 174 aaKnown RBP8.16□□□□□ -1.1
MED28-201ENST00000237380 MFSD14CQ5VZR4 134 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 FERMT3Q86UX7 667 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 CCHCR1Q8TD31 782 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 RABGGTAQ92696 567 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 RBSNQ9H1K0 784 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 VPS37BQ9H9H4 285 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 FAM98CQ17RN3 349 aaKnown RBP8.16□□□□□ -1.1
MED28-201ENST00000237380 ARL13BQ3SXY8 428 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 PARD3BQ8TEW8 1205 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 N4BP2L2Q92802 583 aaPredicted RBP8.16□□□□□ -1.1
MED28-201ENST00000237380 DHX58Q96C10 678 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 SLC10A4Q96EP9 437 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 QTRT2Q9H974 415 aaKnown RBP8.16□□□□□ -1.1
MED28-201ENST00000237380 ANGEL1Q9UNK9 670 aaKnown RBP8.16□□□□□ -1.1
MED28-201ENST00000237380 ORC6Q9Y5N6 252 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 EMILIN1Q9Y6C2 1016 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 TMEM191BP0C7N4 346 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 UBXN2AP68543 259 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 PPP2R3AQ06190 1150 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 ZNF790Q6PG37 636 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 CEP120Q8N960 986 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.16□□□□□ -1.1
MED28-201ENST00000237380 PAGR1Q9BTK6 254 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 DHX36Q9H2U1 1008 aaKnown RBP8.16□□□□□ -1.1
MED28-201ENST00000237380 TTF2Q9UNY4 1162 aaKnown RBP8.16□□□□□ -1.1
MED28-201ENST00000237380 TBC1D19Q8N5T2 526 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 SLC7A5P2Q9GIP4 190 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 SNX25Q9H3E2 840 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 TTI1O43156 1089 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 ABL1P00519 1130 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 TERF1P54274 439 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 TTC39CQ8N584 583 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 KIF9Q9HAQ2 790 aa8.16□□□□□ -1.1
MED28-201ENST00000237380 EXOC3O60645 756 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 SH3TC2Q8TF17 1288 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 EIF2AQ9BY44 585 aaKnown RBP8.15□□□□□ -1.1
MED28-201ENST00000237380 ABCC2Q92887 1545 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 KIAA0556O60303 1618 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 DPYSL4O14531 572 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 PTGDRQ13258 359 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 KHDRBS2Q5VWX1 349 aaKnown RBP8.15□□□□□ -1.1
MED28-201ENST00000237380 ARMCX5Q6P1M9 558 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 FBXO40Q9UH90 709 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.15□□□□□ -1.1
MED28-201ENST00000237380 MAD1L1Q9Y6D9 718 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 XDHP47989 1333 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 RC3H1Q5TC82 1133 aaKnown RBP8.15□□□□□ -1.1
MED28-201ENST00000237380 Q9H521 79 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 RAB20Q9NX57 234 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 GOLGA8JA6NMD2 632 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 F6X3S4 739 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 TSSK1BQ9BXA7 367 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 ADGRL2O95490 1459 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 TCP11Q8WWU5 503 aa8.15□□□□□ -1.1
MED28-201ENST00000237380 INTS4Q96HW7 963 aaKnown RBP8.15□□□□□ -1.1
MED28-201ENST00000237380 EYA2O00167 538 aa8.15□□□□□ -1.11
MED28-201ENST00000237380 ASPRV1Q53RT3 343 aa8.15□□□□□ -1.11
MED28-201ENST00000237380 YAF2Q8IY57 180 aa8.15□□□□□ -1.11
MED28-201ENST00000237380 RPGRIP1Q96KN7 1286 aa8.15□□□□□ -1.11
MED28-201ENST00000237380 CARNS1A5YM72 827 aa8.15□□□□□ -1.11
MED28-201ENST00000237380 NCAPH2Q6IBW4 605 aa8.15□□□□□ -1.11
MED28-201ENST00000237380 GPATCH11Q8N954 259 aa8.15□□□□□ -1.11
MED28-201ENST00000237380 DHX38Q92620 1227 aaKnown RBP8.15□□□□□ -1.11
MED28-201ENST00000237380 BRF1Q92994 677 aa8.15□□□□□ -1.11
MED28-201ENST00000237380 EVA1BQ9NVM1 165 aa8.15□□□□□ -1.11
MED28-201ENST00000237380 NFU1Q9UMS0 254 aa8.15□□□□□ -1.11
MED28-201ENST00000237380 POLR3AO14802 1390 aaPredicted RBP8.15□□□□□ -1.11
MED28-201ENST00000237380 KDM1AO60341 852 aa8.15□□□□□ -1.11
MED28-201ENST00000237380 CD19P15391 556 aa8.15□□□□□ -1.11
MED28-201ENST00000237380 HERC4Q5GLZ8 1057 aaPredicted RBP8.15□□□□□ -1.11
MED28-201ENST00000237380 NSMFQ6X4W1 530 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms