RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 SLC4A8Q2Y0W8 1093 aa15.88■□□□□ 0.13
PCDHB3-201ENST00000231130 FBXL16Q8N461 479 aa15.88■□□□□ 0.13
PCDHB3-201ENST00000231130 RUFY1Q96T51 708 aa15.88■□□□□ 0.13
PCDHB3-201ENST00000231130 GREM2Q9H772 168 aa15.88■□□□□ 0.13
PCDHB3-201ENST00000231130 ABHD10Q9NUJ1 306 aa15.88■□□□□ 0.13
PCDHB3-201ENST00000231130 RAB21Q9UL25 225 aa15.88■□□□□ 0.13
PCDHB3-201ENST00000231130 TRIM49BA6NDI0 452 aa15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 ITGA6P23229 1130 aa15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 ATP1A2P50993 1020 aa15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 IFNL3Q8IZI9 196 aa15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 WASF1Q92558 559 aa15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 SRPRBQ9Y5M8 271 aaKnown RBP15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 EPN1Q9Y6I3 576 aaPredicted RBP15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 ERCC5P28715 1186 aaPredicted RBP15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 MAP9Q49MG5 647 aa15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 KANK3Q6NY19 840 aa15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 TMTC1Q8IUR5 882 aa15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 V9GY48 417 aaPredicted RBP15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 GBP2P32456 591 aaPredicted RBP15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 CYP26C1Q6V0L0 522 aa15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 APTXQ7Z2E3 356 aaKnown RBP15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 CTAGE1Q96RT6 745 aa15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 UBAC1Q9BSL1 405 aa15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 GDAQ9Y2T3 454 aa15.87■□□□□ 0.13
PCDHB3-201ENST00000231130 CYP27A1Q02318 531 aa15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 CEP85LQ5SZL2 805 aa15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 NAA15Q9BXJ9 866 aaKnown RBP15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 CEP131Q9UPN4 1083 aa15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 TACC3Q9Y6A5 838 aa15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 MCM7P33993 719 aa15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 PPARAQ07869 468 aa15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 WHAMMP3Q1A5X7 153 aa15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 SLC4A4Q9Y6R1 1079 aa15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 DUSP10Q9Y6W6 482 aa15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 FAM237AA0A1B0GTK4 181 aa15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 CHUKO15111 745 aa15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 SYF2O95926 243 aaKnown RBP15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 MYBL2P10244 700 aa15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 IFNAR1P17181 557 aa15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 C2orf54Q08AI8 447 aa15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 CUL4BQ13620 913 aa15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 IQCA1Q86XH1 822 aa15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 TRIM6Q9C030 488 aaPredicted RBP15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 EPB41L4AQ9HCS5 686 aaPredicted RBP15.86■□□□□ 0.13
PCDHB3-201ENST00000231130 GOLGA6BA6NDN3 693 aa15.85■□□□□ 0.13
PCDHB3-201ENST00000231130 GCKP35557 465 aa15.85■□□□□ 0.13
PCDHB3-201ENST00000231130 ARHGAP25P42331 645 aa15.85■□□□□ 0.13
PCDHB3-201ENST00000231130 USP5P45974 858 aa15.85■□□□□ 0.13
PCDHB3-201ENST00000231130 COPB1P53618 953 aaKnown RBP15.85■□□□□ 0.13
PCDHB3-201ENST00000231130 SAR1BQ9Y6B6 198 aa15.85■□□□□ 0.13
PCDHB3-201ENST00000231130 MRC1P22897 1456 aa15.85■□□□□ 0.13
PCDHB3-201ENST00000231130 SLC7A5Q01650 507 aa15.85■□□□□ 0.13
PCDHB3-201ENST00000231130 TRIML1Q8N9V2 468 aa15.85■□□□□ 0.13
PCDHB3-201ENST00000231130 NELFBQ8WX92 580 aa15.85■□□□□ 0.13
PCDHB3-201ENST00000231130 STRBPQ96SI9 672 aaKnown RBP15.85■□□□□ 0.13
PCDHB3-201ENST00000231130 ABCF2Q9UG63 623 aa15.85■□□□□ 0.13
PCDHB3-201ENST00000231130 ZBTB12Q9Y330 459 aaPredicted RBP15.85■□□□□ 0.13
PCDHB3-201ENST00000231130 TTC26A0AVF1 554 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 KCNJ18B7U540 433 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 PPP1R3GB7ZBB8 358 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 CIAO1O76071 339 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 NDUFA10O95299 355 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 DEXIO95424 95 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 PDCLQ13371 301 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 TCIRG1Q13488 830 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 KCNJ12Q14500 433 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 CRACR2BQ8N4Y2 399 aaPredicted RBP15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 SDR42E1Q8WUS8 393 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 STRN4Q9NRL3 753 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 AKNAD1Q5T1N1 836 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 KCTD16Q68DU8 428 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 ANKRD18AQ8IVF6 992 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 FANCBQ8NB91 859 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 SMCR8Q8TEV9 937 aaPredicted RBP15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 ZKSCAN4Q969J2 545 aaPredicted RBP15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 SMARCAL1Q9NZC9 954 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 CXCR5P32302 372 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 PTGDRQ13258 359 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 SND1Q7KZF4 910 aaKnown RBP eCLIP15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 ZNF654Q8IZM8 581 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 CDHR2Q9BYE9 1310 aa15.84■□□□□ 0.13
PCDHB3-201ENST00000231130 IPO7O95373 1038 aaKnown RBP15.83■□□□□ 0.13
PCDHB3-201ENST00000231130 TTF1Q15361 905 aaPredicted RBP15.83■□□□□ 0.13
PCDHB3-201ENST00000231130 FMNL3Q8IVF7 1028 aa15.83■□□□□ 0.13
PCDHB3-201ENST00000231130 JAKMIP2Q96AA8 810 aa15.83■□□□□ 0.13
PCDHB3-201ENST00000231130 CCDC114Q96M63 670 aa15.83■□□□□ 0.13
PCDHB3-201ENST00000231130 LUC7L2Q9Y383 392 aaKnown RBP15.83■□□□□ 0.13
PCDHB3-201ENST00000231130 PPP1R12BO60237 982 aaPredicted RBP15.83■□□□□ 0.12
PCDHB3-201ENST00000231130 ZPR1O75312 459 aa15.83■□□□□ 0.12
PCDHB3-201ENST00000231130 IDEP14735 1019 aa15.83■□□□□ 0.12
PCDHB3-201ENST00000231130 EZH2Q15910 746 aaKnown RBP15.83■□□□□ 0.12
PCDHB3-201ENST00000231130 NT5DC1Q5TFE4 455 aa15.83■□□□□ 0.12
PCDHB3-201ENST00000231130 ANKLE2Q86XL3 938 aa15.83■□□□□ 0.12
PCDHB3-201ENST00000231130 FOXP1Q9H334 677 aaPredicted RBP15.83■□□□□ 0.12
PCDHB3-201ENST00000231130 MYH8P13535 1937 aa15.83■□□□□ 0.12
PCDHB3-201ENST00000231130 CYP2D7A0A087X1C5 515 aa15.83■□□□□ 0.12
PCDHB3-201ENST00000231130 A0A1B0GUA9 196 aa15.83■□□□□ 0.12
PCDHB3-201ENST00000231130 PAK1Q13153 545 aa15.83■□□□□ 0.12
PCDHB3-201ENST00000231130 KCTD19Q17RG1 926 aaPredicted RBP15.83■□□□□ 0.12
PCDHB3-201ENST00000231130 NOC3LQ8WTT2 800 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms