RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 SYMPKQ92797 1274 aaKnown RBP21.87■■□□□ 1.09
YBX3-201ENST00000228251 GPKOWQ92917 476 aaPredicted RBP eCLIP21.87■■□□□ 1.09
YBX3-201ENST00000228251 XPO4Q9C0E2 1151 aaKnown RBP21.87■■□□□ 1.09
YBX3-201ENST00000228251 SLX4Q8IY92 1834 aa21.86■■□□□ 1.09
YBX3-201ENST00000228251 STXBP3O00186 592 aa21.86■■□□□ 1.09
YBX3-201ENST00000228251 MYO1BO43795 1136 aa21.86■■□□□ 1.09
YBX3-201ENST00000228251 SMARCA1P28370 1054 aa21.86■■□□□ 1.09
YBX3-201ENST00000228251 ARID5BQ14865 1188 aa21.86■■□□□ 1.09
YBX3-201ENST00000228251 IL17AQ16552 155 aa21.86■■□□□ 1.09
YBX3-201ENST00000228251 MASTLQ96GX5 879 aa21.86■■□□□ 1.09
YBX3-201ENST00000228251 BARHL2Q9NY43 387 aa21.86■■□□□ 1.09
YBX3-201ENST00000228251 IMPACTQ9P2X3 320 aa21.86■■□□□ 1.09
YBX3-201ENST00000228251 STX8Q9UNK0 236 aa21.86■■□□□ 1.09
YBX3-201ENST00000228251 IGKV6D-41A0A0C4DH26 115 aa21.85■■□□□ 1.09
YBX3-201ENST00000228251 SLFN14P0C7P3 912 aa21.85■■□□□ 1.09
YBX3-201ENST00000228251 GALNT17Q6IS24 598 aa21.85■■□□□ 1.09
YBX3-201ENST00000228251 RASGRP2Q7LDG7 609 aa21.85■■□□□ 1.09
YBX3-201ENST00000228251 GRAMD1CQ8IYS0 662 aa21.85■■□□□ 1.09
YBX3-201ENST00000228251 CEP95Q96GE4 821 aa21.85■■□□□ 1.09
YBX3-201ENST00000228251 ZC3H12CQ9C0D7 883 aaKnown RBP21.85■■□□□ 1.09
YBX3-201ENST00000228251 IFNKQ9P0W0 207 aa21.85■■□□□ 1.09
YBX3-201ENST00000228251 TOP1P11387 765 aaKnown RBP21.84■■□□□ 1.09
YBX3-201ENST00000228251 TPM4P67936 248 aa21.84■■□□□ 1.09
YBX3-201ENST00000228251 FANCCQ00597 558 aa21.84■■□□□ 1.09
YBX3-201ENST00000228251 E2F4Q16254 413 aa21.84■■□□□ 1.09
YBX3-201ENST00000228251 PDILTQ8N807 584 aa21.84■■□□□ 1.09
YBX3-201ENST00000228251 FBXO41Q8TF61 875 aa21.84■■□□□ 1.09
YBX3-201ENST00000228251 DDX4Q9NQI0 724 aaKnown RBP21.84■■□□□ 1.09
YBX3-201ENST00000228251 ATP1A3P13637 1013 aa21.84■■□□□ 1.09
YBX3-201ENST00000228251 LMOD1P29536 600 aaPredicted RBP21.84■■□□□ 1.09
YBX3-201ENST00000228251 CCZ1BP86790 482 aa21.84■■□□□ 1.09
YBX3-201ENST00000228251 CCZ1P86791 482 aaPredicted RBP21.84■■□□□ 1.09
YBX3-201ENST00000228251 ARL6IP4Q66PJ3 421 aaKnown RBP21.84■■□□□ 1.09
YBX3-201ENST00000228251 DPP8Q6V1X1 898 aaPredicted RBP21.84■■□□□ 1.09
YBX3-201ENST00000228251 MLKLQ8NB16 471 aa21.84■■□□□ 1.09
YBX3-201ENST00000228251 PARP3Q9Y6F1 533 aa21.84■■□□□ 1.09
YBX3-201ENST00000228251 MYO3BQ8WXR4 1341 aa21.84■■□□□ 1.09
YBX3-201ENST00000228251 KLRF2D3W0D1 207 aa21.83■■□□□ 1.09
YBX3-201ENST00000228251 HHIPL2Q6UWX4 724 aa21.83■■□□□ 1.09
YBX3-201ENST00000228251 SMARCE1Q969G3 411 aa21.83■■□□□ 1.09
YBX3-201ENST00000228251 MED15Q96RN5 788 aa21.83■■□□□ 1.09
YBX3-201ENST00000228251 PCDHA6Q9UN73 950 aa21.83■■□□□ 1.09
YBX3-201ENST00000228251 PCDHA8Q9Y5H6 950 aa21.83■■□□□ 1.09
YBX3-201ENST00000228251 CCDC148Q8NFR7 591 aa21.82■■□□□ 1.08
YBX3-201ENST00000228251 DHX58Q96C10 678 aa21.82■■□□□ 1.08
YBX3-201ENST00000228251 PAGE5Q96GU1 130 aa21.82■■□□□ 1.08
YBX3-201ENST00000228251 MXD3Q9BW11 206 aa21.82■■□□□ 1.08
YBX3-201ENST00000228251 TTF2Q9UNY4 1162 aaKnown RBP21.82■■□□□ 1.08
YBX3-201ENST00000228251 GSDMDP57764 484 aa21.82■■□□□ 1.08
YBX3-201ENST00000228251 ZMYND12Q9H0C1 365 aa21.82■■□□□ 1.08
YBX3-201ENST00000228251 MYH4Q9Y623 1939 aa21.81■■□□□ 1.08
YBX3-201ENST00000228251 VWA3AA6NCI4 1184 aa21.81■■□□□ 1.08
YBX3-201ENST00000228251 PARP1P09874 1014 aaKnown RBP21.81■■□□□ 1.08
YBX3-201ENST00000228251 GOLGA8HP0CJ92 632 aa21.81■■□□□ 1.08
YBX3-201ENST00000228251 ZNF18P17022 549 aa21.81■■□□□ 1.08
YBX3-201ENST00000228251 FMR1Q06787 632 aaKnown RBP eCLIP21.81■■□□□ 1.08
YBX3-201ENST00000228251 DOK7Q18PE1 504 aa21.81■■□□□ 1.08
YBX3-201ENST00000228251 APOBEC3HQ6NTF7 200 aaKnown RBP21.81■■□□□ 1.08
YBX3-201ENST00000228251 RASGRP4Q8TDF6 673 aa21.81■■□□□ 1.08
YBX3-201ENST00000228251 PRIMPOLQ96LW4 560 aa21.81■■□□□ 1.08
YBX3-201ENST00000228251 ANO8Q9HCE9 1232 aaPredicted RBP21.81■■□□□ 1.08
YBX3-201ENST00000228251 KCND1Q9NSA2 647 aa21.81■■□□□ 1.08
YBX3-201ENST00000228251 MTMR4Q9NYA4 1195 aa21.81■■□□□ 1.08
YBX3-201ENST00000228251 SNHG28P0DPA3 235 aa21.8■■□□□ 1.08
YBX3-201ENST00000228251 MCM7P33993 719 aa21.8■■□□□ 1.08
YBX3-201ENST00000228251 DPYDQ12882 1025 aa21.8■■□□□ 1.08
YBX3-201ENST00000228251 FILIP1Q7Z7B0 1213 aa21.8■■□□□ 1.08
YBX3-201ENST00000228251 ENOX1Q8TC92 643 aaKnown RBP21.8■■□□□ 1.08
YBX3-201ENST00000228251 DPF2Q92785 391 aa21.8■■□□□ 1.08
YBX3-201ENST00000228251 FANCLQ9NW38 375 aa21.8■■□□□ 1.08
YBX3-201ENST00000228251 SMC2O95347 1197 aa21.79■■□□□ 1.08
YBX3-201ENST00000228251 CT47A1Q5JQC4 288 aaPredicted RBP21.79■■□□□ 1.08
YBX3-201ENST00000228251 CDC42EP5Q6NZY7 148 aa21.79■■□□□ 1.08
YBX3-201ENST00000228251 PDXDC2PQ6P474 469 aa21.79■■□□□ 1.08
YBX3-201ENST00000228251 USP17L2Q6R6M4 530 aa21.79■■□□□ 1.08
YBX3-201ENST00000228251 HEATR3Q7Z4Q2 680 aa21.79■■□□□ 1.08
YBX3-201ENST00000228251 CPVLQ9H3G5 476 aa21.79■■□□□ 1.08
YBX3-201ENST00000228251 RIOX1Q9H6W3 641 aa21.79■■□□□ 1.08
YBX3-201ENST00000228251 FKBP1AP62942 108 aaKnown RBP21.79■■□□□ 1.08
YBX3-201ENST00000228251 STYK1Q6J9G0 422 aa21.79■■□□□ 1.08
YBX3-201ENST00000228251 PSME4Q14997 1843 aa21.78■■□□□ 1.08
YBX3-201ENST00000228251 F8W031 263 aaPredicted RBP21.78■■□□□ 1.08
YBX3-201ENST00000228251 PDHBP11177 359 aa21.78■■□□□ 1.08
YBX3-201ENST00000228251 AKR1B1P15121 316 aa21.78■■□□□ 1.08
YBX3-201ENST00000228251 LONP1P36776 959 aaKnown RBP21.78■■□□□ 1.08
YBX3-201ENST00000228251 ARMCX5Q6P1M9 558 aa21.78■■□□□ 1.08
YBX3-201ENST00000228251 PODNQ7Z5L7 613 aa21.78■■□□□ 1.08
YBX3-201ENST00000228251 MRIQ9BWK5 157 aa21.78■■□□□ 1.08
YBX3-201ENST00000228251 USP40Q9NVE5 1235 aa21.78■■□□□ 1.08
YBX3-201ENST00000228251 INTS13Q9NVM9 706 aa21.78■■□□□ 1.08
YBX3-201ENST00000228251 SWAP70Q9UH65 585 aa21.78■■□□□ 1.08
YBX3-201ENST00000228251 DACH1Q9UI36 760 aa21.78■■□□□ 1.08
YBX3-201ENST00000228251 ERCC5P28715 1186 aaPredicted RBP21.77■■□□□ 1.08
YBX3-201ENST00000228251 SHMT1P34896 483 aa21.77■■□□□ 1.08
YBX3-201ENST00000228251 PICALMQ13492 652 aa21.77■■□□□ 1.08
YBX3-201ENST00000228251 MYRIPQ8NFW9 859 aa21.77■■□□□ 1.08
YBX3-201ENST00000228251 GSDMAQ96QA5 445 aa21.77■■□□□ 1.08
YBX3-201ENST00000228251 MTRQ99707 1265 aa21.77■■□□□ 1.08
YBX3-201ENST00000228251 UQCRHLA0A096LP55 91 aa21.76■■□□□ 1.07
YBX3-201ENST00000228251 ESYT2A0FGR8 921 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms