RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 CUL5Q93034 780 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 KAZALD1Q96I82 304 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 HDAC6Q9UBN7 1215 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 NEDD4P46934 1319 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 CHRNDQ07001 517 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 KLHL30Q0D2K2 578 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 TPTE2Q6XPS3 522 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 ANKRD7Q92527 254 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 HAUS4Q9H6D7 363 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.3■□□□□ 0.04
NFKB1-201ENST00000226574 MORC2Q9Y6X9 1032 aaPredicted RBP15.3■□□□□ 0.04
NFKB1-201ENST00000226574 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
NFKB1-201ENST00000226574 CNNM4Q6P4Q7 775 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 GIGYF2Q6Y7W6 1299 aaKnown RBP15.3■□□□□ 0.04
NFKB1-201ENST00000226574 SUGCTQ9HAC7 445 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 ZNF609O15014 1411 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 CPS1P31327 1500 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 E7EVH7 732 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 FMNL1O95466 1100 aaPredicted RBP15.3■□□□□ 0.04
NFKB1-201ENST00000226574 VIMP08670 466 aaKnown RBP15.3■□□□□ 0.04
NFKB1-201ENST00000226574 ACTN2P35609 894 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 RASSF7Q02833 373 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 C2orf54Q08AI8 447 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 SLC9C1Q4G0N8 1177 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 TRIML1Q8N9V2 468 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 STRBPQ96SI9 672 aaKnown RBP15.3■□□□□ 0.04
NFKB1-201ENST00000226574 KCNK9Q9NPC2 374 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 MED23Q9ULK4 1368 aa15.3■□□□□ 0.04
NFKB1-201ENST00000226574 BAZ2BQ9UIF8 2168 aaKnown RBP15.29■□□□□ 0.04
NFKB1-201ENST00000226574 TNNC1P63316 161 aa15.29■□□□□ 0.04
NFKB1-201ENST00000226574 IRX3P78415 501 aaPredicted RBP15.29■□□□□ 0.04
NFKB1-201ENST00000226574 GRIN1Q05586 938 aa15.29■□□□□ 0.04
NFKB1-201ENST00000226574 EHHADHQ08426 723 aa15.29■□□□□ 0.04
NFKB1-201ENST00000226574 KRT31Q15323 416 aa15.29■□□□□ 0.04
NFKB1-201ENST00000226574 PAGE5Q96GU1 130 aa15.29■□□□□ 0.04
NFKB1-201ENST00000226574 GSDMAQ96QA5 445 aa15.29■□□□□ 0.04
NFKB1-201ENST00000226574 ABCB4P21439 1286 aa15.29■□□□□ 0.04
NFKB1-201ENST00000226574 METTL16Q86W50 562 aaKnown RBP15.29■□□□□ 0.04
NFKB1-201ENST00000226574 TTLL11Q8NHH1 800 aa15.29■□□□□ 0.04
NFKB1-201ENST00000226574 SALL3Q9BXA9 1300 aa15.29■□□□□ 0.04
NFKB1-201ENST00000226574 NBPF26B4DH59 902 aa15.29■□□□□ 0.04
NFKB1-201ENST00000226574 ERCC5P28715 1186 aaPredicted RBP15.29■□□□□ 0.04
NFKB1-201ENST00000226574 GUCY2DQ02846 1103 aa15.29■□□□□ 0.04
NFKB1-201ENST00000226574 CETN1Q12798 172 aa15.29■□□□□ 0.04
NFKB1-201ENST00000226574 CEP85LQ5SZL2 805 aa15.29■□□□□ 0.04
NFKB1-201ENST00000226574 NBPF10Q6P3W6 841 aaKnown RBP15.29■□□□□ 0.04
NFKB1-201ENST00000226574 NBPF15Q8N660 670 aa15.29■□□□□ 0.04
NFKB1-201ENST00000226574 FOXP1Q9H334 677 aaPredicted RBP15.29■□□□□ 0.04
NFKB1-201ENST00000226574 PCDHB13Q9Y5F0 798 aa15.29■□□□□ 0.04
NFKB1-201ENST00000226574 FRMPD2Q68DX3 1309 aaPredicted RBP15.29■□□□□ 0.04
NFKB1-201ENST00000226574 GCOM1H8Y6P7 765 aaPredicted RBP15.28■□□□□ 0.04
NFKB1-201ENST00000226574 NMT2O60551 498 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 MYZAPP0CAP1 466 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 EXOSC10Q01780 885 aaKnown RBP15.28■□□□□ 0.04
NFKB1-201ENST00000226574 FMR1Q06787 632 aaKnown RBP eCLIP15.28■□□□□ 0.04
NFKB1-201ENST00000226574 GRIPAP1Q4V328 841 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 DAAM2Q86T65 1068 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 PNMA8AQ86V59 439 aaPredicted RBP15.28■□□□□ 0.04
NFKB1-201ENST00000226574 CAPN7Q9Y6W3 813 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 H7C1D1 291 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 GNPATO15228 680 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 DNM2P50570 870 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 SP4Q02446 784 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 CUL4BQ13620 913 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 IFI16Q16666 785 aaKnown RBP15.28■□□□□ 0.04
NFKB1-201ENST00000226574 MB21D2Q8IYB1 491 aaPredicted RBP15.28■□□□□ 0.04
NFKB1-201ENST00000226574 GPR108Q9NPR9 543 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 CFAP74Q9C0B2 1584 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 MROH5Q6ZUA9 1318 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 ARHGEF40Q8TER5 1519 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 KLRF2D3W0D1 207 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 KCNK3O14649 394 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 GTPBP6O43824 516 aaPredicted RBP15.28■□□□□ 0.04
NFKB1-201ENST00000226574 PTPREP23469 700 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 LRRN4CLQ8ND94 238 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 GOLGA5Q8TBA6 731 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 SMCR8Q8TEV9 937 aaPredicted RBP15.28■□□□□ 0.04
NFKB1-201ENST00000226574 CABS1Q96KC9 395 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 POLR2FP61218 127 aaKnown RBP15.28■□□□□ 0.04
NFKB1-201ENST00000226574 RESP18Q5W5W9 173 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 NLRP10Q86W26 655 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 PPM1EQ8WY54 764 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 LRRC27Q9C0I9 530 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 TAOK3Q9H2K8 898 aa15.28■□□□□ 0.04
NFKB1-201ENST00000226574 HLA-DOAP06340 250 aa15.27■□□□□ 0.04
NFKB1-201ENST00000226574 CALCRLQ16602 461 aa15.27■□□□□ 0.04
NFKB1-201ENST00000226574 ATG9AQ7Z3C6 839 aa15.27■□□□□ 0.04
NFKB1-201ENST00000226574 CNOT6LQ96LI5 555 aaKnown RBP15.27■□□□□ 0.04
NFKB1-201ENST00000226574 DPH5Q9H2P9 285 aa15.27■□□□□ 0.04
NFKB1-201ENST00000226574 SRPRBQ9Y5M8 271 aaKnown RBP15.27■□□□□ 0.04
NFKB1-201ENST00000226574 PP2D1A8MPX8 630 aa15.27■□□□□ 0.03
NFKB1-201ENST00000226574 MYO1CO00159 1063 aa15.27■□□□□ 0.03
NFKB1-201ENST00000226574 NDUFA10O95299 355 aa15.27■□□□□ 0.03
NFKB1-201ENST00000226574 KRT71Q3SY84 523 aa15.27■□□□□ 0.03
NFKB1-201ENST00000226574 CFAP221Q4G0U5 840 aa15.27■□□□□ 0.03
NFKB1-201ENST00000226574 IFT20Q8IY31 132 aa15.27■□□□□ 0.03
NFKB1-201ENST00000226574 REXO1Q8N1G1 1221 aaKnown RBP15.27■□□□□ 0.03
NFKB1-201ENST00000226574 CCDC155Q8N6L0 562 aa15.27■□□□□ 0.03
NFKB1-201ENST00000226574 CCDC51Q96ER9 411 aa15.27■□□□□ 0.03
NFKB1-201ENST00000226574 SPDYE3A6NKU9 549 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms