RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 SPATA20Q8TB22 786 aa28.39■■■□□ 2.13
RUNDC3A-201ENST00000225441 SRRTQ9BXP5 876 aaKnown RBP28.39■■■□□ 2.13
RUNDC3A-201ENST00000225441 ZNF646O15015 1829 aaPredicted RBP28.38■■■□□ 2.13
RUNDC3A-201ENST00000225441 USP17L3A6NCW0 530 aa28.38■■■□□ 2.13
RUNDC3A-201ENST00000225441 USP17L4A6NCW7 530 aa28.38■■■□□ 2.13
RUNDC3A-201ENST00000225441 ETF1P62495 437 aaKnown RBP28.38■■■□□ 2.13
RUNDC3A-201ENST00000225441 DACT2Q5SW24 774 aa28.38■■■□□ 2.13
RUNDC3A-201ENST00000225441 USP17L1Q7RTZ2 530 aa28.38■■■□□ 2.13
RUNDC3A-201ENST00000225441 FANCLQ9NW38 375 aa28.38■■■□□ 2.13
RUNDC3A-201ENST00000225441 ARHGAP6O43182 974 aa28.37■■■□□ 2.13
RUNDC3A-201ENST00000225441 FAM163AQ96GL9 167 aaPredicted RBP28.37■■■□□ 2.13
RUNDC3A-201ENST00000225441 TAOK3Q9H2K8 898 aa28.37■■■□□ 2.13
RUNDC3A-201ENST00000225441 DDX41Q9UJV9 622 aaKnown RBP28.37■■■□□ 2.13
RUNDC3A-201ENST00000225441 KCNJ14Q9UNX9 436 aa28.37■■■□□ 2.13
RUNDC3A-201ENST00000225441 YDJCA8MPS7 323 aa28.36■■■□□ 2.13
RUNDC3A-201ENST00000225441 ZNF18P17022 549 aa28.36■■■□□ 2.13
RUNDC3A-201ENST00000225441 TBX2Q13207 712 aaPredicted RBP28.36■■■□□ 2.13
RUNDC3A-201ENST00000225441 ISM2Q6H9L7 571 aa28.36■■■□□ 2.13
RUNDC3A-201ENST00000225441 SDR42E1Q8WUS8 393 aa28.36■■■□□ 2.13
RUNDC3A-201ENST00000225441 FERMT2Q96AC1 680 aa28.36■■■□□ 2.13
RUNDC3A-201ENST00000225441 CRNKL1Q9BZJ0 848 aaKnown RBP28.36■■■□□ 2.13
RUNDC3A-201ENST00000225441 MYH2Q9UKX2 1941 aa28.36■■■□□ 2.13
RUNDC3A-201ENST00000225441 COL4A5P29400 1685 aa28.36■■■□□ 2.13
RUNDC3A-201ENST00000225441 BAG3O95817 575 aa28.36■■■□□ 2.13
RUNDC3A-201ENST00000225441 PPP4CP60510 307 aa28.36■■■□□ 2.13
RUNDC3A-201ENST00000225441 GAKO14976 1311 aa28.36■■■□□ 2.13
RUNDC3A-201ENST00000225441 TRIM75PA6NK02 468 aa28.35■■■□□ 2.13
RUNDC3A-201ENST00000225441 NFKBIEO00221 500 aa28.35■■■□□ 2.13
RUNDC3A-201ENST00000225441 CBX1P83916 185 aa28.35■■■□□ 2.13
RUNDC3A-201ENST00000225441 DMTNQ08495 405 aa28.35■■■□□ 2.13
RUNDC3A-201ENST00000225441 CATIPQ7Z7H3 387 aa28.35■■■□□ 2.13
RUNDC3A-201ENST00000225441 FHDC1Q9C0D6 1143 aaPredicted RBP28.35■■■□□ 2.13
RUNDC3A-201ENST00000225441 TTF2Q9UNY4 1162 aaKnown RBP28.35■■■□□ 2.13
RUNDC3A-201ENST00000225441 TNKSO95271 1327 aa28.35■■■□□ 2.13
RUNDC3A-201ENST00000225441 POLR2DO15514 142 aaKnown RBP28.34■■■□□ 2.13
RUNDC3A-201ENST00000225441 DDAH1O94760 285 aa28.34■■■□□ 2.13
RUNDC3A-201ENST00000225441 BMP6P22004 513 aa28.34■■■□□ 2.13
RUNDC3A-201ENST00000225441 DPF2Q92785 391 aa28.34■■■□□ 2.13
RUNDC3A-201ENST00000225441 ZSCAN10Q96SZ4 725 aaPredicted RBP28.34■■■□□ 2.13
RUNDC3A-201ENST00000225441 BRMS1Q9HCU9 246 aa28.34■■■□□ 2.13
RUNDC3A-201ENST00000225441 SERTAD1Q9UHV2 236 aa28.34■■■□□ 2.13
RUNDC3A-201ENST00000225441 ARFGEF1Q9Y6D6 1849 aa28.34■■■□□ 2.13
RUNDC3A-201ENST00000225441 GPR75-ASB3A0A0A6YYF3 556 aa28.34■■■□□ 2.13
RUNDC3A-201ENST00000225441 F8W031 263 aaPredicted RBP28.34■■■□□ 2.13
RUNDC3A-201ENST00000225441 ACTN4O43707 911 aaKnown RBP28.34■■■□□ 2.13
RUNDC3A-201ENST00000225441 KRT2P35908 639 aa28.34■■■□□ 2.13
RUNDC3A-201ENST00000225441 CERS3Q8IU89 383 aa28.34■■■□□ 2.13
RUNDC3A-201ENST00000225441 PYM1Q9BRP8 204 aaKnown RBP28.34■■■□□ 2.13
RUNDC3A-201ENST00000225441 PHF20Q9BVI0 1012 aa28.34■■■□□ 2.13
RUNDC3A-201ENST00000225441 PCDHB6Q9Y5E3 794 aa28.34■■■□□ 2.13
RUNDC3A-201ENST00000225441 STX10O60499 249 aa28.33■■■□□ 2.13
RUNDC3A-201ENST00000225441 ZSCAN20P17040 1043 aaPredicted RBP28.33■■■□□ 2.13
RUNDC3A-201ENST00000225441 BTDP43251 543 aa28.33■■■□□ 2.13
RUNDC3A-201ENST00000225441 PLCD1P51178 756 aa28.33■■■□□ 2.13
RUNDC3A-201ENST00000225441 IQCA1Q86XH1 822 aa28.33■■■□□ 2.13
RUNDC3A-201ENST00000225441 NUP133Q8WUM0 1156 aa28.33■■■□□ 2.13
RUNDC3A-201ENST00000225441 ARID3AQ99856 593 aa28.33■■■□□ 2.13
RUNDC3A-201ENST00000225441 ZKSCAN3Q9BRR0 538 aa28.33■■■□□ 2.13
RUNDC3A-201ENST00000225441 LTBP3Q9NS15 1303 aa28.32■■■□□ 2.12
RUNDC3A-201ENST00000225441 NIM1KQ8IY84 436 aa28.32■■■□□ 2.12
RUNDC3A-201ENST00000225441 PSME4Q14997 1843 aa28.32■■■□□ 2.12
RUNDC3A-201ENST00000225441 UBE2Q2LH0YL09 131 aa28.32■■■□□ 2.12
RUNDC3A-201ENST00000225441 PDE4BQ07343 736 aa28.32■■■□□ 2.12
RUNDC3A-201ENST00000225441 FUT2Q10981 343 aa28.32■■■□□ 2.12
RUNDC3A-201ENST00000225441 SYT10Q6XYQ8 523 aa28.32■■■□□ 2.12
RUNDC3A-201ENST00000225441 SH3RF3Q8TEJ3 882 aaPredicted RBP28.32■■■□□ 2.12
RUNDC3A-201ENST00000225441 ATP8A2Q9NTI2 1148 aa28.32■■■□□ 2.12
RUNDC3A-201ENST00000225441 DAGLAQ9Y4D2 1042 aa28.32■■■□□ 2.12
RUNDC3A-201ENST00000225441 MYH6P13533 1939 aa28.31■■■□□ 2.12
RUNDC3A-201ENST00000225441 SPECC1LQ69YQ0 1117 aa28.31■■■□□ 2.12
RUNDC3A-201ENST00000225441 HOMER1Q86YM7 354 aa28.31■■■□□ 2.12
RUNDC3A-201ENST00000225441 CABP5Q9NP86 173 aa28.31■■■□□ 2.12
RUNDC3A-201ENST00000225441 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.31■■■□□ 2.12
RUNDC3A-201ENST00000225441 MINDY4BA8MYZ0 360 aa28.3■■■□□ 2.12
RUNDC3A-201ENST00000225441 NR5A1Q13285 461 aa28.3■■■□□ 2.12
RUNDC3A-201ENST00000225441 ZNRF3Q9ULT6 936 aa28.3■■■□□ 2.12
RUNDC3A-201ENST00000225441 NFE2L3Q9Y4A8 694 aa28.3■■■□□ 2.12
RUNDC3A-201ENST00000225441 ORC4O43929 436 aa28.29■■■□□ 2.12
RUNDC3A-201ENST00000225441 SLFN14P0C7P3 912 aa28.29■■■□□ 2.12
RUNDC3A-201ENST00000225441 CDK11BP21127 795 aaKnown RBP28.29■■■□□ 2.12
RUNDC3A-201ENST00000225441 PKN1Q16512 942 aa28.29■■■□□ 2.12
RUNDC3A-201ENST00000225441 IFIT1BQ5T764 474 aaKnown RBP28.29■■■□□ 2.12
RUNDC3A-201ENST00000225441 SH3RF1Q7Z6J0 888 aa28.29■■■□□ 2.12
RUNDC3A-201ENST00000225441 ENAHQ8N8S7 591 aaPredicted RBP28.29■■■□□ 2.12
RUNDC3A-201ENST00000225441 TPM1P09493 284 aa28.29■■■□□ 2.12
RUNDC3A-201ENST00000225441 PLCG2P16885 1265 aa28.29■■■□□ 2.12
RUNDC3A-201ENST00000225441 TRAPPC10P48553 1259 aa28.29■■■□□ 2.12
RUNDC3A-201ENST00000225441 SCNN1DP51172 638 aa28.29■■■□□ 2.12
RUNDC3A-201ENST00000225441 KIAA0825Q8IV33 1275 aa28.29■■■□□ 2.12
RUNDC3A-201ENST00000225441 REXO1L1PQ8IX06 675 aa28.29■■■□□ 2.12
RUNDC3A-201ENST00000225441 CSRNP2Q9H175 543 aa28.29■■■□□ 2.12
RUNDC3A-201ENST00000225441 DCP1AQ9NPI6 582 aaPredicted RBP28.29■■■□□ 2.12
RUNDC3A-201ENST00000225441 GABPB1Q06547 395 aaPredicted RBP28.28■■■□□ 2.12
RUNDC3A-201ENST00000225441 HHIPL2Q6UWX4 724 aa28.28■■■□□ 2.12
RUNDC3A-201ENST00000225441 TMEM139Q8IV31 216 aa28.28■■■□□ 2.12
RUNDC3A-201ENST00000225441 GSDMAQ96QA5 445 aa28.28■■■□□ 2.12
RUNDC3A-201ENST00000225441 INTS13Q9NVM9 706 aa28.28■■■□□ 2.12
RUNDC3A-201ENST00000225441 FOXN1O15353 648 aa28.27■■■□□ 2.12
RUNDC3A-201ENST00000225441 TRIM65Q6PJ69 517 aa28.27■■■□□ 2.12
RUNDC3A-201ENST00000225441 OXER1Q8TDS5 423 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms