RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 PSMC4P43686 418 aa17.27■□□□□ 0.35
PCOLCE-201ENST00000223061 CCDC178Q5BJE1 867 aa17.27■□□□□ 0.35
PCOLCE-201ENST00000223061 DGKHQ86XP1 1220 aa17.27■□□□□ 0.35
PCOLCE-201ENST00000223061 GPRC5AQ8NFJ5 357 aa17.27■□□□□ 0.35
PCOLCE-201ENST00000223061 ATG4CQ96DT6 458 aa17.27■□□□□ 0.35
PCOLCE-201ENST00000223061 EFCC1Q9HA90 598 aa17.27■□□□□ 0.35
PCOLCE-201ENST00000223061 FMNL1O95466 1100 aaPredicted RBP17.26■□□□□ 0.35
PCOLCE-201ENST00000223061 BMP3P12645 472 aa17.26■□□□□ 0.35
PCOLCE-201ENST00000223061 CTGFP29279 349 aa17.26■□□□□ 0.35
PCOLCE-201ENST00000223061 OTOP1Q7RTM1 612 aa17.26■□□□□ 0.35
PCOLCE-201ENST00000223061 GMCL1Q96IK5 515 aa17.26■□□□□ 0.35
PCOLCE-201ENST00000223061 TRIM47Q96LD4 638 aa17.26■□□□□ 0.35
PCOLCE-201ENST00000223061 MORF4L1Q9UBU8 362 aa17.26■□□□□ 0.35
PCOLCE-201ENST00000223061 CNMDO75829 334 aa17.25■□□□□ 0.35
PCOLCE-201ENST00000223061 FCGRTP55899 365 aa17.25■□□□□ 0.35
PCOLCE-201ENST00000223061 ERVK-9P63128 1117 aa17.25■□□□□ 0.35
PCOLCE-201ENST00000223061 ERVK-24P63145 666 aa17.25■□□□□ 0.35
PCOLCE-201ENST00000223061 ARHGEF6Q15052 776 aa17.25■□□□□ 0.35
PCOLCE-201ENST00000223061 CCDC96Q2M329 555 aa17.25■□□□□ 0.35
PCOLCE-201ENST00000223061 LBX2Q6XYB7 198 aa17.25■□□□□ 0.35
PCOLCE-201ENST00000223061 KCTD1Q719H9 257 aa17.25■□□□□ 0.35
PCOLCE-201ENST00000223061 MB21D2Q8IYB1 491 aaPredicted RBP17.25■□□□□ 0.35
PCOLCE-201ENST00000223061 RASEFQ8IZ41 740 aa17.25■□□□□ 0.35
PCOLCE-201ENST00000223061 SLF1Q9BQI6 1058 aa17.25■□□□□ 0.35
PCOLCE-201ENST00000223061 KAT14Q9H8E8 782 aa17.25■□□□□ 0.35
PCOLCE-201ENST00000223061 BTBD7Q9P203 1132 aa17.25■□□□□ 0.35
PCOLCE-201ENST00000223061 PPP1R9AQ9ULJ8 1098 aa17.25■□□□□ 0.35
PCOLCE-201ENST00000223061 RABGAP1Q9Y3P9 1069 aa17.25■□□□□ 0.35
PCOLCE-201ENST00000223061 TMEM232C9JQI7 657 aa17.24■□□□□ 0.35
PCOLCE-201ENST00000223061 IFIT3O14879 490 aaKnown RBP17.24■□□□□ 0.35
PCOLCE-201ENST00000223061 ZKSCAN1P17029 563 aaPredicted RBP17.24■□□□□ 0.35
PCOLCE-201ENST00000223061 IKQ13123 557 aaPredicted RBP17.24■□□□□ 0.35
PCOLCE-201ENST00000223061 Q3C1V9 767 aa17.24■□□□□ 0.35
PCOLCE-201ENST00000223061 IFIT1BQ5T764 474 aaKnown RBP17.24■□□□□ 0.35
PCOLCE-201ENST00000223061 KIFC2Q96AC6 838 aa17.24■□□□□ 0.35
PCOLCE-201ENST00000223061 MYH4Q9Y623 1939 aa17.24■□□□□ 0.35
PCOLCE-201ENST00000223061 ANTXR2P58335 489 aa17.24■□□□□ 0.35
PCOLCE-201ENST00000223061 COL9A3Q14050 684 aaPredicted RBP17.24■□□□□ 0.35
PCOLCE-201ENST00000223061 TNS4Q8IZW8 715 aa17.24■□□□□ 0.35
PCOLCE-201ENST00000223061 PNMA1Q8ND90 353 aa17.24■□□□□ 0.35
PCOLCE-201ENST00000223061 DCAF4Q8WV16 495 aa17.24■□□□□ 0.35
PCOLCE-201ENST00000223061 ANKS1AQ92625 1134 aa17.24■□□□□ 0.35
PCOLCE-201ENST00000223061 MCOLN1Q9GZU1 580 aa17.24■□□□□ 0.35
PCOLCE-201ENST00000223061 FEM1BQ9UK73 627 aa17.24■□□□□ 0.35
PCOLCE-201ENST00000223061 FRMPD2Q68DX3 1309 aaPredicted RBP17.23■□□□□ 0.35
PCOLCE-201ENST00000223061 MYPNQ86TC9 1320 aa17.23■□□□□ 0.35
PCOLCE-201ENST00000223061 ERICH2A1L162 156 aa17.23■□□□□ 0.35
PCOLCE-201ENST00000223061 TNPO2O14787 897 aaKnown RBP17.23■□□□□ 0.35
PCOLCE-201ENST00000223061 PRC1O43663 620 aa17.23■□□□□ 0.35
PCOLCE-201ENST00000223061 HSPA4P34932 840 aa17.23■□□□□ 0.35
PCOLCE-201ENST00000223061 PLS1Q14651 629 aa17.23■□□□□ 0.35
PCOLCE-201ENST00000223061 SART3Q15020 963 aaKnown RBP17.23■□□□□ 0.35
PCOLCE-201ENST00000223061 SEC23AQ15436 765 aa17.23■□□□□ 0.35
PCOLCE-201ENST00000223061 TMEM67Q5HYA8 995 aa17.23■□□□□ 0.35
PCOLCE-201ENST00000223061 CCAR1Q8IX12 1150 aaKnown RBP17.23■□□□□ 0.35
PCOLCE-201ENST00000223061 VWA5AO00534 786 aa17.22■□□□□ 0.35
PCOLCE-201ENST00000223061 PDHBP11177 359 aa17.22■□□□□ 0.35
PCOLCE-201ENST00000223061 MCM5P33992 734 aa17.22■□□□□ 0.35
PCOLCE-201ENST00000223061 STAT2P52630 851 aa17.22■□□□□ 0.35
PCOLCE-201ENST00000223061 MB21D1Q8N884 522 aa17.22■□□□□ 0.35
PCOLCE-201ENST00000223061 PRPF38AQ8NAV1 312 aaKnown RBP17.22■□□□□ 0.35
PCOLCE-201ENST00000223061 PORCNQ9H237 461 aa17.22■□□□□ 0.35
PCOLCE-201ENST00000223061 GPCPD1Q9NPB8 672 aa17.22■□□□□ 0.35
PCOLCE-201ENST00000223061 CCNA1P78396 465 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 WTAPQ15007 396 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 ADCK5Q3MIX3 580 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 WDR78Q5VTH9 848 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 NEK1Q96PY6 1258 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 USP26Q9BXU7 913 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 SENP2Q9HC62 589 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 CWC22Q9HCG8 908 aaKnown RBP17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 GPHNQ9NQX3 736 aaPredicted RBP17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 ADAMTS5Q9UNA0 930 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 KRT32Q14532 448 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 TMEM132BQ14DG7 1078 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 PKN2Q16513 984 aaKnown RBP17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 TSGA10IPQ3SY00 556 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 TTBK2Q6IQ55 1244 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 FAM160B2Q86V87 743 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 CHURC1Q8WUH1 139 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 LRRC2Q9BYS8 371 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 SPATC1LQ9H0A9 340 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 CTDP1Q9Y5B0 961 aaPredicted RBP17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 SNX14Q9Y5W7 946 aa17.21■□□□□ 0.35
PCOLCE-201ENST00000223061 ZSWIM8A7E2V4 1837 aa17.21■□□□□ 0.34
PCOLCE-201ENST00000223061 GNRH1P01148 92 aa17.2■□□□□ 0.34
PCOLCE-201ENST00000223061 GOLGA8HP0CJ92 632 aa17.2■□□□□ 0.34
PCOLCE-201ENST00000223061 HOXD10P28358 340 aa17.2■□□□□ 0.34
PCOLCE-201ENST00000223061 SLC16A2P36021 539 aa17.2■□□□□ 0.34
PCOLCE-201ENST00000223061 PRKCZQ05513 592 aa17.2■□□□□ 0.34
PCOLCE-201ENST00000223061 IGDCC4Q8TDY8 1250 aa17.2■□□□□ 0.34
PCOLCE-201ENST00000223061 KCNB2Q92953 911 aa17.2■□□□□ 0.34
PCOLCE-201ENST00000223061 COA7Q96BR5 231 aa17.2■□□□□ 0.34
PCOLCE-201ENST00000223061 MOV10L1Q9BXT6 1211 aaKnown RBP17.2■□□□□ 0.34
PCOLCE-201ENST00000223061 PTPN22Q9Y2R2 807 aa17.2■□□□□ 0.34
PCOLCE-201ENST00000223061 ZBED4O75132 1171 aa17.19■□□□□ 0.34
PCOLCE-201ENST00000223061 SNHG28P0DPA3 235 aa17.19■□□□□ 0.34
PCOLCE-201ENST00000223061 MAPK4P31152 587 aa17.19■□□□□ 0.34
PCOLCE-201ENST00000223061 SNAP25P60880 206 aa17.19■□□□□ 0.34
PCOLCE-201ENST00000223061 ZNF543Q08ER8 600 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms