RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 CNTNAP5Q8WYK1 1306 aa17.33■□□□□ 0.36
TGFB1-201ENST00000221930 SOWAHDA6NJG2 315 aa17.33■□□□□ 0.36
TGFB1-201ENST00000221930 MCM7P33993 719 aa17.33■□□□□ 0.36
TGFB1-201ENST00000221930 DPYDQ12882 1025 aa17.33■□□□□ 0.36
TGFB1-201ENST00000221930 CUL4BQ13620 913 aa17.33■□□□□ 0.36
TGFB1-201ENST00000221930 SH3RF1Q7Z6J0 888 aa17.33■□□□□ 0.36
TGFB1-201ENST00000221930 CTCFLQ8NI51 663 aaPredicted RBP17.33■□□□□ 0.36
TGFB1-201ENST00000221930 FERMT2Q96AC1 680 aa17.33■□□□□ 0.36
TGFB1-201ENST00000221930 CDC25AP30304 524 aa17.33■□□□□ 0.36
TGFB1-201ENST00000221930 SPATA1Q5VX52 437 aa17.33■□□□□ 0.36
TGFB1-201ENST00000221930 TBC1D9BQ66K14 1250 aa17.33■□□□□ 0.36
TGFB1-201ENST00000221930 CNKSR2Q8WXI2 1034 aa17.33■□□□□ 0.36
TGFB1-201ENST00000221930 CCDC34Q96HJ3 373 aa17.33■□□□□ 0.36
TGFB1-201ENST00000221930 A0A0U1RQJ8 604 aa17.32■□□□□ 0.36
TGFB1-201ENST00000221930 FGRP09769 529 aa17.32■□□□□ 0.36
TGFB1-201ENST00000221930 NLRP5P59047 1200 aa17.32■□□□□ 0.36
TGFB1-201ENST00000221930 RBL2Q08999 1139 aa17.32■□□□□ 0.36
TGFB1-201ENST00000221930 IGSF22Q8N9C0 903 aa17.32■□□□□ 0.36
TGFB1-201ENST00000221930 ATRIPQ8WXE1 791 aa17.32■□□□□ 0.36
TGFB1-201ENST00000221930 PDS5AQ29RF7 1337 aaKnown RBP17.32■□□□□ 0.36
TGFB1-201ENST00000221930 PPP1R3GB7ZBB8 358 aa17.32■□□□□ 0.36
TGFB1-201ENST00000221930 CALM1P0DP23 149 aa17.32■□□□□ 0.36
TGFB1-201ENST00000221930 CALM2P0DP24 149 aa17.32■□□□□ 0.36
TGFB1-201ENST00000221930 CALM3P0DP25 149 aa17.32■□□□□ 0.36
TGFB1-201ENST00000221930 CASQ1P31415 396 aa17.32■□□□□ 0.36
TGFB1-201ENST00000221930 MRPL44Q9H9J2 332 aaKnown RBP17.32■□□□□ 0.36
TGFB1-201ENST00000221930 KIAA1551Q9HCM1 1747 aa17.32■□□□□ 0.36
TGFB1-201ENST00000221930 AKR1B15C9JRZ8 316 aaPredicted RBP17.31■□□□□ 0.36
TGFB1-201ENST00000221930 FBXO33Q7Z6M2 555 aa17.31■□□□□ 0.36
TGFB1-201ENST00000221930 NOL10Q9BSC4 688 aaKnown RBP17.31■□□□□ 0.36
TGFB1-201ENST00000221930 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.31■□□□□ 0.36
TGFB1-201ENST00000221930 MYH13Q9UKX3 1938 aa17.31■□□□□ 0.36
TGFB1-201ENST00000221930 TSPY2A6NKD2 308 aa17.31■□□□□ 0.36
TGFB1-201ENST00000221930 TADA3O75528 432 aa17.31■□□□□ 0.36
TGFB1-201ENST00000221930 DDAH1O94760 285 aa17.31■□□□□ 0.36
TGFB1-201ENST00000221930 CCT6AP40227 531 aaKnown RBP17.31■□□□□ 0.36
TGFB1-201ENST00000221930 ATP2C1P98194 919 aaPredicted RBP17.31■□□□□ 0.36
TGFB1-201ENST00000221930 IL17AQ16552 155 aa17.31■□□□□ 0.36
TGFB1-201ENST00000221930 TXNRD3Q86VQ6 643 aa17.31■□□□□ 0.36
TGFB1-201ENST00000221930 ZBTB9Q96C00 473 aa17.31■□□□□ 0.36
TGFB1-201ENST00000221930 GSDMAQ96QA5 445 aa17.31■□□□□ 0.36
TGFB1-201ENST00000221930 LZTFL1Q9NQ48 299 aa17.31■□□□□ 0.36
TGFB1-201ENST00000221930 ADD3Q9UEY8 706 aaKnown RBP17.31■□□□□ 0.36
TGFB1-201ENST00000221930 CTNND2Q9UQB3 1225 aa17.31■□□□□ 0.36
TGFB1-201ENST00000221930 XDHP47989 1333 aa17.3■□□□□ 0.36
TGFB1-201ENST00000221930 SCG2P13521 617 aa17.3■□□□□ 0.36
TGFB1-201ENST00000221930 RPS8P62241 208 aaKnown RBP17.3■□□□□ 0.36
TGFB1-201ENST00000221930 SLC51AQ86UW1 340 aa17.3■□□□□ 0.36
TGFB1-201ENST00000221930 PPFIBP1Q86W92 1011 aa17.3■□□□□ 0.36
TGFB1-201ENST00000221930 GJD4Q96KN9 370 aaPredicted RBP17.3■□□□□ 0.36
TGFB1-201ENST00000221930 MTRQ99707 1265 aa17.3■□□□□ 0.36
TGFB1-201ENST00000221930 CRNKL1Q9BZJ0 848 aaKnown RBP17.3■□□□□ 0.36
TGFB1-201ENST00000221930 FAM53CQ9NYF3 392 aa17.3■□□□□ 0.36
TGFB1-201ENST00000221930 MAPK8IP1Q9UQF2 711 aa17.3■□□□□ 0.36
TGFB1-201ENST00000221930 MTMR7Q9Y216 660 aa17.3■□□□□ 0.36
TGFB1-201ENST00000221930 MAST2Q6P0Q8 1798 aa17.3■□□□□ 0.36
TGFB1-201ENST00000221930 USP17L8P0C7I0 530 aa17.29■□□□□ 0.36
TGFB1-201ENST00000221930 ADRA2BP18089 450 aa17.29■□□□□ 0.36
TGFB1-201ENST00000221930 HIBADHP31937 336 aaKnown RBP17.29■□□□□ 0.36
TGFB1-201ENST00000221930 CDKAL1Q5VV42 579 aa17.29■□□□□ 0.36
TGFB1-201ENST00000221930 RAD9BQ6WBX8 426 aa17.29■□□□□ 0.36
TGFB1-201ENST00000221930 GPKOWQ92917 476 aaPredicted RBP eCLIP17.29■□□□□ 0.361e-6■■■■■ 31.9
TGFB1-201ENST00000221930 SRP68Q9UHB9 627 aaKnown RBP17.29■□□□□ 0.36
TGFB1-201ENST00000221930 FHOD1Q9Y613 1164 aa17.29■□□□□ 0.36
TGFB1-201ENST00000221930 BMP15O95972 392 aa17.29■□□□□ 0.36
TGFB1-201ENST00000221930 PTF1AQ7RTS3 328 aa17.29■□□□□ 0.36
TGFB1-201ENST00000221930 RASGRP4Q8TDF6 673 aa17.29■□□□□ 0.36
TGFB1-201ENST00000221930 MCM9Q9NXL9 1143 aa17.29■□□□□ 0.36
TGFB1-201ENST00000221930 CASP14P31944 242 aa17.28■□□□□ 0.36
TGFB1-201ENST00000221930 E2F4Q16254 413 aa17.28■□□□□ 0.36
TGFB1-201ENST00000221930 RRAGBQ5VZM2 374 aa17.28■□□□□ 0.36
TGFB1-201ENST00000221930 IQUBQ8NA54 791 aa17.28■□□□□ 0.36
TGFB1-201ENST00000221930 CERKQ8TCT0 537 aa17.28■□□□□ 0.36
TGFB1-201ENST00000221930 KIFC2Q96AC6 838 aa17.28■□□□□ 0.36
TGFB1-201ENST00000221930 SRRTQ9BXP5 876 aaKnown RBP17.28■□□□□ 0.36
TGFB1-201ENST00000221930 GOLGA6L9A6NEM1 432 aa17.28■□□□□ 0.36
TGFB1-201ENST00000221930 EFCAB8A8MWE9 144 aa17.28■□□□□ 0.36
TGFB1-201ENST00000221930 SEMA3EO15041 775 aa17.28■□□□□ 0.36
TGFB1-201ENST00000221930 ORC4O43929 436 aa17.28■□□□□ 0.36
TGFB1-201ENST00000221930 PCP11498 1178 aaKnown RBP17.28■□□□□ 0.36
TGFB1-201ENST00000221930 TNNT3P45378 269 aaPredicted RBP17.28■□□□□ 0.36
TGFB1-201ENST00000221930 MAP3K9P80192 1104 aa17.28■□□□□ 0.36
TGFB1-201ENST00000221930 RCSD1Q6JBY9 416 aa17.28■□□□□ 0.36
TGFB1-201ENST00000221930 CCDC12Q8WUD4 166 aaPredicted RBP17.28■□□□□ 0.36
TGFB1-201ENST00000221930 TRPC5Q9UL62 973 aaPredicted RBP17.28■□□□□ 0.36
TGFB1-201ENST00000221930 LOC102724159A0A0B4J2E5 919 aa17.28■□□□□ 0.36
TGFB1-201ENST00000221930 SEC31AO94979 1220 aaKnown RBP17.28■□□□□ 0.36
TGFB1-201ENST00000221930 PWP2Q15269 919 aaKnown RBP17.28■□□□□ 0.36
TGFB1-201ENST00000221930 PFKFB3Q16875 520 aaPredicted RBP17.28■□□□□ 0.36
TGFB1-201ENST00000221930 CCDC175P0C221 793 aa17.27■□□□□ 0.36
TGFB1-201ENST00000221930 PBX1P40424 430 aa17.27■□□□□ 0.36
TGFB1-201ENST00000221930 FXR1P51114 621 aaKnown RBP eCLIP17.27■□□□□ 0.364e-6■■■□□ 17.7
TGFB1-201ENST00000221930 BMS1Q14692 1282 aaKnown RBP17.27■□□□□ 0.36
TGFB1-201ENST00000221930 PDXDC2PQ6P474 469 aa17.27■□□□□ 0.36
TGFB1-201ENST00000221930 STAG2Q8N3U4 1231 aa17.27■□□□□ 0.36
TGFB1-201ENST00000221930 PANX2Q96RD6 677 aa17.27■□□□□ 0.36
TGFB1-201ENST00000221930 ZSWIM4Q9H7M6 989 aa17.27■□□□□ 0.36
TGFB1-201ENST00000221930 MRFAP1Q9Y605 127 aa17.27■□□□□ 0.36
TGFB1-201ENST00000221930 FAM205AQ6ZU69 1335 aa17.27■□□□□ 0.36
TGFB1-201ENST00000221930 UBR3Q6ZT12 1888 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms