RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 PLCG2P16885 1265 aa25.26■■□□□ 1.63
CCDC9-201ENST00000221922 ZNF827Q17R98 1081 aa25.26■■□□□ 1.63
CCDC9-201ENST00000221922 SLF2Q8IX21 1173 aa25.26■■□□□ 1.63
CCDC9-201ENST00000221922 MLKLQ8NB16 471 aa25.26■■□□□ 1.63
CCDC9-201ENST00000221922 TGFBRAP1Q8WUH2 860 aa25.26■■□□□ 1.63
CCDC9-201ENST00000221922 AKT1S1Q96B36 256 aa25.26■■□□□ 1.63
CCDC9-201ENST00000221922 INTS13Q9NVM9 706 aa25.26■■□□□ 1.63
CCDC9-201ENST00000221922 ACTN4O43707 911 aaKnown RBP25.25■■□□□ 1.63
CCDC9-201ENST00000221922 BTDP43251 543 aa25.25■■□□□ 1.63
CCDC9-201ENST00000221922 TFAP4Q01664 338 aa25.25■■□□□ 1.63
CCDC9-201ENST00000221922 PFKFB3Q16875 520 aaPredicted RBP25.25■■□□□ 1.63
CCDC9-201ENST00000221922 FBXO38Q6PIJ6 1188 aa25.25■■□□□ 1.63
CCDC9-201ENST00000221922 FAM205CA6NFA0 338 aa25.25■■□□□ 1.63
CCDC9-201ENST00000221922 TMEM232C9JQI7 657 aa25.25■■□□□ 1.63
CCDC9-201ENST00000221922 TRAPPC10P48553 1259 aa25.25■■□□□ 1.63
CCDC9-201ENST00000221922 TBX2Q13207 712 aaPredicted RBP25.25■■□□□ 1.63
CCDC9-201ENST00000221922 MFSD14BQ5SR56 506 aa25.25■■□□□ 1.63
CCDC9-201ENST00000221922 TCP11L1Q9NUJ3 509 aa25.25■■□□□ 1.63
CCDC9-201ENST00000221922 FAM53CQ9NYF3 392 aa25.25■■□□□ 1.63
CCDC9-201ENST00000221922 ATP6V0A2Q9Y487 856 aa25.25■■□□□ 1.63
CCDC9-201ENST00000221922 ZNF18P17022 549 aa25.24■■□□□ 1.63
CCDC9-201ENST00000221922 NPY5RQ15761 445 aa25.24■■□□□ 1.63
CCDC9-201ENST00000221922 EARS2Q5JPH6 523 aaKnown RBP25.24■■□□□ 1.63
CCDC9-201ENST00000221922 TRIM65Q6PJ69 517 aa25.24■■□□□ 1.63
CCDC9-201ENST00000221922 TMEM139Q8IV31 216 aa25.24■■□□□ 1.63
CCDC9-201ENST00000221922 GAKO14976 1311 aa25.24■■□□□ 1.63
CCDC9-201ENST00000221922 C6orf229H3BNL8 230 aa25.24■■□□□ 1.63
CCDC9-201ENST00000221922 MORC3Q14149 939 aa25.24■■□□□ 1.63
CCDC9-201ENST00000221922 TTC38Q5R3I4 469 aa25.24■■□□□ 1.63
CCDC9-201ENST00000221922 ENOX1Q8TC92 643 aaKnown RBP25.24■■□□□ 1.63
CCDC9-201ENST00000221922 DYNLL2Q96FJ2 89 aa25.24■■□□□ 1.63
CCDC9-201ENST00000221922 IL17RBQ9NRM6 502 aa25.24■■□□□ 1.63
CCDC9-201ENST00000221922 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.24■■□□□ 1.635e-7■■■□□ 14.9
CCDC9-201ENST00000221922 CALML3P27482 149 aa25.23■■□□□ 1.63
CCDC9-201ENST00000221922 NLRP5P59047 1200 aa25.23■■□□□ 1.63
CCDC9-201ENST00000221922 HOMER1Q86YM7 354 aa25.23■■□□□ 1.63
CCDC9-201ENST00000221922 REXO1L1PQ8IX06 675 aa25.23■■□□□ 1.63
CCDC9-201ENST00000221922 MKNK2Q9HBH9 465 aa25.23■■□□□ 1.63
CCDC9-201ENST00000221922 FOCADQ5VW36 1801 aa25.23■■□□□ 1.63
CCDC9-201ENST00000221922 SLC4A8Q2Y0W8 1093 aa25.22■■□□□ 1.63
CCDC9-201ENST00000221922 COL23A1Q86Y22 540 aaPredicted RBP25.22■■□□□ 1.63
CCDC9-201ENST00000221922 ZNF287Q9HBT7 754 aa25.22■■□□□ 1.63
CCDC9-201ENST00000221922 BAZ2BQ9UIF8 2168 aaKnown RBP25.22■■□□□ 1.63
CCDC9-201ENST00000221922 ARHGAP6O43182 974 aa25.22■■□□□ 1.63
CCDC9-201ENST00000221922 SRGNP10124 158 aa25.22■■□□□ 1.63
CCDC9-201ENST00000221922 GNAQP50148 359 aa25.22■■□□□ 1.63
CCDC9-201ENST00000221922 ZNF772Q68DY9 489 aaPredicted RBP25.22■■□□□ 1.63
CCDC9-201ENST00000221922 MAPKAPK5Q8IW41 473 aa25.22■■□□□ 1.63
CCDC9-201ENST00000221922 PDILTQ8N807 584 aa25.22■■□□□ 1.63
CCDC9-201ENST00000221922 FLAD1Q8NFF5 587 aa25.22■■□□□ 1.63
CCDC9-201ENST00000221922 SPATA20Q8TB22 786 aa25.22■■□□□ 1.63
CCDC9-201ENST00000221922 SH3GLB2Q9NR46 395 aa25.22■■□□□ 1.63
CCDC9-201ENST00000221922 PRR29P0C7W0 189 aa25.21■■□□□ 1.63
CCDC9-201ENST00000221922 NPR1P16066 1061 aa25.21■■□□□ 1.63
CCDC9-201ENST00000221922 CT47A1Q5JQC4 288 aaPredicted RBP25.21■■□□□ 1.63
CCDC9-201ENST00000221922 TEX11Q8IYF3 940 aa25.21■■□□□ 1.63
CCDC9-201ENST00000221922 COA1Q9GZY4 146 aa25.21■■□□□ 1.63
CCDC9-201ENST00000221922 QSER1Q2KHR3 1735 aa25.21■■□□□ 1.63
CCDC9-201ENST00000221922 H2AFXP16104 143 aaPredicted RBP25.21■■□□□ 1.63
CCDC9-201ENST00000221922 PLCD1P51178 756 aa25.21■■□□□ 1.63
CCDC9-201ENST00000221922 ATP2C1P98194 919 aaPredicted RBP25.21■■□□□ 1.63
CCDC9-201ENST00000221922 GABPB1Q06547 395 aaPredicted RBP25.21■■□□□ 1.63
CCDC9-201ENST00000221922 FMR1Q06787 632 aaKnown RBP eCLIP25.21■■□□□ 1.63
CCDC9-201ENST00000221922 USP49Q70CQ1 688 aa25.21■■□□□ 1.63
CCDC9-201ENST00000221922 PNMA1Q8ND90 353 aa25.21■■□□□ 1.63
CCDC9-201ENST00000221922 COL11A2P13942 1736 aaPredicted RBP25.2■■□□□ 1.62
CCDC9-201ENST00000221922 ZSCAN12O43309 604 aa25.2■■□□□ 1.62
CCDC9-201ENST00000221922 SLFN14P0C7P3 912 aa25.2■■□□□ 1.62
CCDC9-201ENST00000221922 TSPY3P0CV98 308 aa25.2■■□□□ 1.62
CCDC9-201ENST00000221922 TSPY8P0CW00 308 aa25.2■■□□□ 1.62
CCDC9-201ENST00000221922 RHBDL3P58872 404 aa25.2■■□□□ 1.62
CCDC9-201ENST00000221922 ZNF444Q8N0Y2 327 aaPredicted RBP25.2■■□□□ 1.62
CCDC9-201ENST00000221922 DNAI1Q9UI46 699 aa25.2■■□□□ 1.62
CCDC9-201ENST00000221922 SUGT1Q9Y2Z0 365 aa25.2■■□□□ 1.62
CCDC9-201ENST00000221922 NFE2L3Q9Y4A8 694 aa25.2■■□□□ 1.62
CCDC9-201ENST00000221922 FLT1P17948 1338 aa25.19■■□□□ 1.62
CCDC9-201ENST00000221922 GRM4Q14833 912 aa25.19■■□□□ 1.62
CCDC9-201ENST00000221922 ZNF174Q15697 407 aa25.19■■□□□ 1.62
CCDC9-201ENST00000221922 ERCC6LQ2NKX8 1250 aa25.19■■□□□ 1.62
CCDC9-201ENST00000221922 SYMPKQ92797 1274 aaKnown RBP25.19■■□□□ 1.62
CCDC9-201ENST00000221922 DHX58Q96C10 678 aa25.19■■□□□ 1.62
CCDC9-201ENST00000221922 PYM1Q9BRP8 204 aaKnown RBP25.19■■□□□ 1.62
CCDC9-201ENST00000221922 MYH1P12882 1939 aa25.19■■□□□ 1.62
CCDC9-201ENST00000221922 RASA1P20936 1047 aa25.19■■□□□ 1.62
CCDC9-201ENST00000221922 C16orf86Q6ZW13 317 aa25.19■■□□□ 1.62
CCDC9-201ENST00000221922 KRT222Q8N1A0 295 aa25.19■■□□□ 1.62
CCDC9-201ENST00000221922 LRRN4CLQ8ND94 238 aa25.19■■□□□ 1.62
CCDC9-201ENST00000221922 SAP30BPQ9UHR5 308 aaKnown RBP25.19■■□□□ 1.62
CCDC9-201ENST00000221922 APBA3O96018 575 aa25.18■■□□□ 1.62
CCDC9-201ENST00000221922 SRRTQ9BXP5 876 aaKnown RBP25.18■■□□□ 1.62
CCDC9-201ENST00000221922 SNED1Q8TER0 1413 aa25.18■■□□□ 1.62
CCDC9-201ENST00000221922 KIF20AO95235 890 aa25.17■■□□□ 1.62
CCDC9-201ENST00000221922 ERCC5P28715 1186 aaPredicted RBP25.17■■□□□ 1.62
CCDC9-201ENST00000221922 PDE6BP35913 854 aa25.17■■□□□ 1.62
CCDC9-201ENST00000221922 GOLGA8FQ08AF8 430 aa25.17■■□□□ 1.62
CCDC9-201ENST00000221922 GOLGA8DPQ0D2H9 430 aa25.17■■□□□ 1.62
CCDC9-201ENST00000221922 PTGDRQ13258 359 aa25.17■■□□□ 1.62
CCDC9-201ENST00000221922 SPECC1LQ69YQ0 1117 aa25.17■■□□□ 1.62
CCDC9-201ENST00000221922 SLC44A5Q8NCS7 719 aa25.17■■□□□ 1.62
CCDC9-201ENST00000221922 EPSTI1Q96J88 318 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms