RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 ABCB5Q2M3G0 1257 aa17.47■□□□□ 0.39
PAF1-201ENST00000221265 GPC2Q8N158 579 aa17.47■□□□□ 0.39
PAF1-201ENST00000221265 GPRC5DQ9NZD1 345 aa17.47■□□□□ 0.39
PAF1-201ENST00000221265 HERC5Q9UII4 1024 aaKnown RBP17.47■□□□□ 0.39
PAF1-201ENST00000221265 HACL1Q9UJ83 578 aa17.47■□□□□ 0.39
PAF1-201ENST00000221265 KLRF2D3W0D1 207 aa17.46■□□□□ 0.39
PAF1-201ENST00000221265 ZNF500O60304 480 aaPredicted RBP17.46■□□□□ 0.39
PAF1-201ENST00000221265 DDNO94850 711 aaPredicted RBP17.46■□□□□ 0.39
PAF1-201ENST00000221265 EEF2P13639 858 aaKnown RBP17.46■□□□□ 0.39
PAF1-201ENST00000221265 EPS15P42566 896 aa17.46■□□□□ 0.39
PAF1-201ENST00000221265 TRIM29Q14134 588 aa17.46■□□□□ 0.39
PAF1-201ENST00000221265 USP25Q9UHP3 1055 aa17.46■□□□□ 0.39
PAF1-201ENST00000221265 FRMPD2Q68DX3 1309 aaPredicted RBP17.46■□□□□ 0.39
PAF1-201ENST00000221265 MMP1P03956 469 aa17.46■□□□□ 0.39
PAF1-201ENST00000221265 PARP1P09874 1014 aaKnown RBP17.46■□□□□ 0.39
PAF1-201ENST00000221265 MMP14P50281 582 aa17.46■□□□□ 0.39
PAF1-201ENST00000221265 TEPSINQ96N21 525 aa17.46■□□□□ 0.39
PAF1-201ENST00000221265 USP28Q96RU2 1077 aa17.46■□□□□ 0.39
PAF1-201ENST00000221265 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.46■□□□□ 0.39
PAF1-201ENST00000221265 BTBD18B2RXH4 712 aa17.45■□□□□ 0.38
PAF1-201ENST00000221265 H7C1D1 291 aa17.45■□□□□ 0.38
PAF1-201ENST00000221265 TMEM179Q6ZVK1 233 aa17.45■□□□□ 0.38
PAF1-201ENST00000221265 OXER1Q8TDS5 423 aa17.45■□□□□ 0.38
PAF1-201ENST00000221265 PGBD1Q96JS3 809 aa17.45■□□□□ 0.38
PAF1-201ENST00000221265 C9orf131Q5VYM1 1079 aa17.44■□□□□ 0.38
PAF1-201ENST00000221265 UBA5Q9GZZ9 404 aa17.44■□□□□ 0.38
PAF1-201ENST00000221265 KANSL2Q9H9L4 492 aa17.44■□□□□ 0.38
PAF1-201ENST00000221265 OFD1O75665 1012 aa17.44■□□□□ 0.38
PAF1-201ENST00000221265 SNHG28P0DPA3 235 aa17.44■□□□□ 0.38
PAF1-201ENST00000221265 SCG2P13521 617 aa17.44■□□□□ 0.38
PAF1-201ENST00000221265 GNAQP50148 359 aa17.44■□□□□ 0.38
PAF1-201ENST00000221265 HIRAP54198 1017 aaPredicted RBP17.44■□□□□ 0.38
PAF1-201ENST00000221265 ICA1Q05084 483 aa17.44■□□□□ 0.38
PAF1-201ENST00000221265 NR5A1Q13285 461 aa17.44■□□□□ 0.38
PAF1-201ENST00000221265 MYSM1Q5VVJ2 828 aa17.44■□□□□ 0.38
PAF1-201ENST00000221265 DIS3L2Q8IYB7 885 aaKnown RBP17.44■□□□□ 0.38
PAF1-201ENST00000221265 RGS22Q8NE09 1264 aa17.44■□□□□ 0.38
PAF1-201ENST00000221265 GPKOWQ92917 476 aaPredicted RBP eCLIP17.44■□□□□ 0.38
PAF1-201ENST00000221265 NUP62CLQ9H1M0 184 aa17.44■□□□□ 0.38
PAF1-201ENST00000221265 ATAD5Q96QE3 1844 aa17.44■□□□□ 0.38
PAF1-201ENST00000221265 GOLGA6L4A6NEF3 574 aa17.43■□□□□ 0.38
PAF1-201ENST00000221265 ADAMTS3O15072 1205 aa17.43■□□□□ 0.38
PAF1-201ENST00000221265 ADCY5O95622 1261 aa17.43■□□□□ 0.38
PAF1-201ENST00000221265 U2AF2P26368 475 aaKnown RBP eCLIP17.43■□□□□ 0.38
PAF1-201ENST00000221265 TNNI2P48788 182 aa17.43■□□□□ 0.38
PAF1-201ENST00000221265 CAMK4Q16566 473 aa17.43■□□□□ 0.38
PAF1-201ENST00000221265 PFKFB3Q16875 520 aaPredicted RBP17.43■□□□□ 0.38
PAF1-201ENST00000221265 GPCPD1Q9NPB8 672 aa17.43■□□□□ 0.38
PAF1-201ENST00000221265 DACT1Q9NYF0 836 aa17.43■□□□□ 0.38
PAF1-201ENST00000221265 NYAP2Q9P242 653 aa17.43■□□□□ 0.38
PAF1-201ENST00000221265 RAD21O60216 631 aa17.43■□□□□ 0.38
PAF1-201ENST00000221265 CCDC192P0DO97 292 aa17.43■□□□□ 0.38
PAF1-201ENST00000221265 GNL2Q13823 731 aaKnown RBP17.43■□□□□ 0.38
PAF1-201ENST00000221265 MAP3K11Q16584 847 aa17.43■□□□□ 0.38
PAF1-201ENST00000221265 ANGEL2Q5VTE6 544 aaKnown RBP17.43■□□□□ 0.38
PAF1-201ENST00000221265 BRAPQ7Z569 592 aa17.43■□□□□ 0.38
PAF1-201ENST00000221265 PHF20Q9BVI0 1012 aa17.43■□□□□ 0.38
PAF1-201ENST00000221265 DEFB129Q9H1M3 183 aa17.43■□□□□ 0.38
PAF1-201ENST00000221265 VAT1LQ9HCJ6 419 aa17.43■□□□□ 0.38
PAF1-201ENST00000221265 A0A1W2PRG0 241 aa17.42■□□□□ 0.38
PAF1-201ENST00000221265 TBC1D12O60347 775 aa17.42■□□□□ 0.38
PAF1-201ENST00000221265 PTMAP06454 111 aaKnown RBP17.42■□□□□ 0.38
PAF1-201ENST00000221265 TNFAIP1Q13829 316 aa17.42■□□□□ 0.38
PAF1-201ENST00000221265 NPY5RQ15761 445 aa17.42■□□□□ 0.38
PAF1-201ENST00000221265 PRAMEF18Q5VWM3 479 aa17.42■□□□□ 0.38
PAF1-201ENST00000221265 TTBK2Q6IQ55 1244 aa17.42■□□□□ 0.38
PAF1-201ENST00000221265 TYW1BQ6NUM6 668 aa17.42■□□□□ 0.38
PAF1-201ENST00000221265 KCTD1Q719H9 257 aa17.42■□□□□ 0.38
PAF1-201ENST00000221265 MKL1Q969V6 931 aa17.42■□□□□ 0.38
PAF1-201ENST00000221265 CLIC4Q9Y696 253 aa17.42■□□□□ 0.38
PAF1-201ENST00000221265 MAP3K10Q02779 954 aa17.41■□□□□ 0.38
PAF1-201ENST00000221265 ZNF543Q08ER8 600 aa17.41■□□□□ 0.38
PAF1-201ENST00000221265 SPZ1Q9BXG8 430 aa17.41■□□□□ 0.38
PAF1-201ENST00000221265 CABP5Q9NP86 173 aa17.41■□□□□ 0.38
PAF1-201ENST00000221265 CFAP45Q9UL16 551 aa17.41■□□□□ 0.38
PAF1-201ENST00000221265 ZBTB21Q9ULJ3 1066 aa17.41■□□□□ 0.38
PAF1-201ENST00000221265 NBPF12Q5TAG4 269 aaPredicted RBP17.41■□□□□ 0.38
PAF1-201ENST00000221265 CCDC84Q86UT8 332 aaPredicted RBP17.41■□□□□ 0.38
PAF1-201ENST00000221265 HOMER1Q86YM7 354 aa17.41■□□□□ 0.38
PAF1-201ENST00000221265 NOSTRINQ8IVI9 506 aa17.41■□□□□ 0.38
PAF1-201ENST00000221265 ZNF396Q96N95 335 aaPredicted RBP17.41■□□□□ 0.38
PAF1-201ENST00000221265 LZTS2Q9BRK4 669 aa17.41■□□□□ 0.38
PAF1-201ENST00000221265 DDX19AQ9NUU7 478 aaKnown RBP17.41■□□□□ 0.38
PAF1-201ENST00000221265 FAM205CA6NFA0 338 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 AP5Z1O43299 807 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 SLC16A2P36021 539 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 ECE1P42892 770 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 SAFBQ15424 915 aaKnown RBP eCLIP17.4■□□□□ 0.38
PAF1-201ENST00000221265 CCDC96Q2M329 555 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 ASPRV1Q53RT3 343 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 NOM1Q5C9Z4 860 aaKnown RBP17.4■□□□□ 0.38
PAF1-201ENST00000221265 WWC2Q6AWC2 1192 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 ACER1Q8TDN7 264 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 PIGSQ96S52 555 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 TNMDQ9H2S6 317 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 CLSTN2Q9H4D0 955 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 GGA3Q9NZ52 723 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.4■□□□□ 0.38
PAF1-201ENST00000221265 PHF20L1A8MW92 1017 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 NR1I2O75469 434 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms