RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 A0A1B0GTH6 734 aa16.58■□□□□ 0.24
CNOT3-201ENST00000221232 PFKFB3Q16875 520 aaPredicted RBP16.58■□□□□ 0.24
CNOT3-201ENST00000221232 RAD9BQ6WBX8 426 aa16.58■□□□□ 0.24
CNOT3-201ENST00000221232 APTXQ7Z2E3 356 aaKnown RBP16.58■□□□□ 0.24
CNOT3-201ENST00000221232 ARHGEF1Q92888 912 aaKnown RBP16.58■□□□□ 0.24
CNOT3-201ENST00000221232 SEC31AO94979 1220 aaKnown RBP16.57■□□□□ 0.24
CNOT3-201ENST00000221232 FGRP09769 529 aa16.57■□□□□ 0.24
CNOT3-201ENST00000221232 TEX35Q5T0J7 233 aa16.57■□□□□ 0.24
CNOT3-201ENST00000221232 N4BP3O15049 544 aa16.57■□□□□ 0.24
CNOT3-201ENST00000221232 ORC4O43929 436 aa16.57■□□□□ 0.24
CNOT3-201ENST00000221232 LDHBP07195 334 aaKnown RBP16.57■□□□□ 0.24
CNOT3-201ENST00000221232 INF2Q27J81 1249 aa16.57■□□□□ 0.24
CNOT3-201ENST00000221232 SLC10A5Q5PT55 438 aa16.57■□□□□ 0.24
CNOT3-201ENST00000221232 BLIDQ8IZY5 108 aa16.57■□□□□ 0.24
CNOT3-201ENST00000221232 CCDC12Q8WUD4 166 aaPredicted RBP16.57■□□□□ 0.24
CNOT3-201ENST00000221232 NARFQ9UHQ1 456 aa16.57■□□□□ 0.24
CNOT3-201ENST00000221232 MORC2Q9Y6X9 1032 aaPredicted RBP16.57■□□□□ 0.24
CNOT3-201ENST00000221232 PHLPP2Q6ZVD8 1323 aa16.57■□□□□ 0.24
CNOT3-201ENST00000221232 ABL1P00519 1130 aa16.56■□□□□ 0.24
CNOT3-201ENST00000221232 TSPY3P0CV98 308 aa16.56■□□□□ 0.24
CNOT3-201ENST00000221232 TSPY8P0CW00 308 aa16.56■□□□□ 0.24
CNOT3-201ENST00000221232 FXR1P51114 621 aaKnown RBP eCLIP16.56■□□□□ 0.24
CNOT3-201ENST00000221232 ZNF771Q7L3S4 317 aaPredicted RBP16.56■□□□□ 0.24
CNOT3-201ENST00000221232 GSDMAQ96QA5 445 aa16.56■□□□□ 0.24
CNOT3-201ENST00000221232 ADD3Q9UEY8 706 aaKnown RBP16.56■□□□□ 0.24
CNOT3-201ENST00000221232 DOCK2Q92608 1830 aa16.56■□□□□ 0.24
CNOT3-201ENST00000221232 TRIM49BA6NDI0 452 aa16.56■□□□□ 0.24
CNOT3-201ENST00000221232 RNF225M0QZC1 329 aaPredicted RBP16.56■□□□□ 0.24
CNOT3-201ENST00000221232 MYO1BO43795 1136 aa16.56■□□□□ 0.24
CNOT3-201ENST00000221232 TFRCP02786 760 aaKnown RBP16.56■□□□□ 0.24
CNOT3-201ENST00000221232 NYXQ9GZU5 481 aa16.56■□□□□ 0.24
CNOT3-201ENST00000221232 ANKRD2Q9GZV1 360 aa16.56■□□□□ 0.24
CNOT3-201ENST00000221232 TMEM60Q9H2L4 133 aa16.56■□□□□ 0.24
CNOT3-201ENST00000221232 ARPP21Q9UBL0 812 aaPredicted RBP16.56■□□□□ 0.24
CNOT3-201ENST00000221232 CCNL1Q9UK58 526 aaPredicted RBP16.56■□□□□ 0.24
CNOT3-201ENST00000221232 COL16A1Q07092 1604 aaPredicted RBP16.56■□□□□ 0.24
CNOT3-201ENST00000221232 TM4SF1P30408 202 aa16.56■□□□□ 0.24
CNOT3-201ENST00000221232 FILIP1LQ4L180 1135 aa16.56■□□□□ 0.24
CNOT3-201ENST00000221232 ZNF444Q8N0Y2 327 aaPredicted RBP16.56■□□□□ 0.24
CNOT3-201ENST00000221232 RTCBQ9Y3I0 505 aaKnown RBP16.56■□□□□ 0.24
CNOT3-201ENST00000221232 TIAM2Q8IVF5 1701 aa16.55■□□□□ 0.24
CNOT3-201ENST00000221232 CCDC194A0A1B0GVG4 234 aa16.55■□□□□ 0.24
CNOT3-201ENST00000221232 KIF5BP33176 963 aa16.55■□□□□ 0.24
CNOT3-201ENST00000221232 STAT6P42226 847 aa16.55■□□□□ 0.24
CNOT3-201ENST00000221232 KRT31Q15323 416 aa16.55■□□□□ 0.24
CNOT3-201ENST00000221232 NELFBQ8WX92 580 aa16.55■□□□□ 0.24
CNOT3-201ENST00000221232 E2F4Q16254 413 aa16.55■□□□□ 0.24
CNOT3-201ENST00000221232 SLC35G1Q2M3R5 365 aa16.55■□□□□ 0.24
CNOT3-201ENST00000221232 C12orf60Q5U649 245 aa16.55■□□□□ 0.24
CNOT3-201ENST00000221232 KRT222Q8N1A0 295 aa16.55■□□□□ 0.24
CNOT3-201ENST00000221232 ACRBPQ8NEB7 543 aa16.55■□□□□ 0.24
CNOT3-201ENST00000221232 ROBO1Q9Y6N7 1651 aa16.54■□□□□ 0.24
CNOT3-201ENST00000221232 BCORQ6W2J9 1755 aa16.54■□□□□ 0.24
CNOT3-201ENST00000221232 RPS6KA4O75676 772 aa16.54■□□□□ 0.24
CNOT3-201ENST00000221232 BMP15O95972 392 aa16.54■□□□□ 0.24
CNOT3-201ENST00000221232 PDXDC2PQ6P474 469 aa16.54■□□□□ 0.24
CNOT3-201ENST00000221232 PUF60Q9UHX1 559 aaKnown RBP16.54■□□□□ 0.24
CNOT3-201ENST00000221232 CACNA1SQ13698 1873 aa16.54■□□□□ 0.24
CNOT3-201ENST00000221232 ARAP2Q8WZ64 1704 aa16.54■□□□□ 0.24
CNOT3-201ENST00000221232 CYTH3O43739 400 aa16.54■□□□□ 0.24
CNOT3-201ENST00000221232 PRCPP42785 496 aa16.54■□□□□ 0.24
CNOT3-201ENST00000221232 BARGINQ6ZT62 677 aa16.54■□□□□ 0.24
CNOT3-201ENST00000221232 NUP88Q99567 741 aaPredicted RBP16.54■□□□□ 0.24
CNOT3-201ENST00000221232 SEMA3EO15041 775 aa16.53■□□□□ 0.24
CNOT3-201ENST00000221232 RPN1P04843 607 aaKnown RBP16.53■□□□□ 0.24
CNOT3-201ENST00000221232 CCDC175P0C221 793 aa16.53■□□□□ 0.24
CNOT3-201ENST00000221232 H2AFXP16104 143 aaPredicted RBP16.53■□□□□ 0.24
CNOT3-201ENST00000221232 RFC4P35249 363 aa16.53■□□□□ 0.24
CNOT3-201ENST00000221232 PPP2R3AQ06190 1150 aa16.53■□□□□ 0.24
CNOT3-201ENST00000221232 WWC2Q6AWC2 1192 aa16.53■□□□□ 0.24
CNOT3-201ENST00000221232 DUOX1Q9NRD9 1551 aa16.53■□□□□ 0.24
CNOT3-201ENST00000221232 MYH13Q9UKX3 1938 aa16.53■□□□□ 0.24
CNOT3-201ENST00000221232 TADA3O75528 432 aa16.53■□□□□ 0.24
CNOT3-201ENST00000221232 GYPCP04921 128 aa16.53■□□□□ 0.24
CNOT3-201ENST00000221232 PCP11498 1178 aaKnown RBP16.53■□□□□ 0.24
CNOT3-201ENST00000221232 CDKAL1Q5VV42 579 aa16.53■□□□□ 0.24
CNOT3-201ENST00000221232 PAK1Q13153 545 aa16.52■□□□□ 0.24
CNOT3-201ENST00000221232 ZNF569Q5MCW4 686 aa16.52■□□□□ 0.24
CNOT3-201ENST00000221232 USP17L2Q6R6M4 530 aa16.52■□□□□ 0.24
CNOT3-201ENST00000221232 DTHD1Q6ZMT9 781 aa16.52■□□□□ 0.24
CNOT3-201ENST00000221232 FCHSD1Q86WN1 690 aa16.52■□□□□ 0.24
CNOT3-201ENST00000221232 MAD2L2Q9UI95 211 aa16.52■□□□□ 0.24
CNOT3-201ENST00000221232 PCDHA4Q9UN74 947 aa16.52■□□□□ 0.24
CNOT3-201ENST00000221232 ADGRG1Q9Y653 693 aa16.52■□□□□ 0.24
CNOT3-201ENST00000221232 PMS1P54277 932 aaKnown RBP16.52■□□□□ 0.24
CNOT3-201ENST00000221232 C4orf32Q8N8J7 132 aa16.52■□□□□ 0.24
CNOT3-201ENST00000221232 TMEM47Q9BQJ4 181 aa16.52■□□□□ 0.24
CNOT3-201ENST00000221232 PCDHA6Q9UN73 950 aa16.52■□□□□ 0.24
CNOT3-201ENST00000221232 PCDHA8Q9Y5H6 950 aa16.52■□□□□ 0.24
CNOT3-201ENST00000221232 GTPBP6O43824 516 aaPredicted RBP16.52■□□□□ 0.23
CNOT3-201ENST00000221232 UBA7P41226 1012 aa16.52■□□□□ 0.23
CNOT3-201ENST00000221232 UBXN1Q04323 297 aa16.52■□□□□ 0.23
CNOT3-201ENST00000221232 LETM2Q2VYF4 491 aa16.52■□□□□ 0.23
CNOT3-201ENST00000221232 SBK1Q52WX2 424 aa16.52■□□□□ 0.23
CNOT3-201ENST00000221232 UBA5Q9GZZ9 404 aa16.52■□□□□ 0.23
CNOT3-201ENST00000221232 KCNJ18B7U540 433 aa16.51■□□□□ 0.23
CNOT3-201ENST00000221232 MFAP3LO75121 409 aa16.51■□□□□ 0.23
CNOT3-201ENST00000221232 TXLNAP40222 546 aa16.51■□□□□ 0.23
CNOT3-201ENST00000221232 MAP3K9P80192 1104 aa16.51■□□□□ 0.23
CNOT3-201ENST00000221232 KCNJ12Q14500 433 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms