RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 CALM1P0DP23 149 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 CALM2P0DP24 149 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 CALM3P0DP25 149 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 NDUFA8P51970 172 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 ST3GAL1Q11201 340 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 APOA5Q6Q788 366 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 TRMT1LQ7Z2T5 733 aaKnown RBP11.84□□□□□ -0.51
VPS18-201ENST00000220509 TEX11Q8IYF3 940 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 TMOD2Q9NZR1 351 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 ELP1O95163 1332 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 JCADQ9P266 1359 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 A0A0G2JLW4 131 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 PPFIA2O75334 1257 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 EIF3JO75822 258 aaKnown RBP11.84□□□□□ -0.51
VPS18-201ENST00000220509 LONRF3Q496Y0 759 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 PIK3AP1Q6ZUJ8 805 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 MAPKAPK5Q8IW41 473 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 CELF1Q92879 486 aaKnown RBP11.84□□□□□ -0.51
VPS18-201ENST00000220509 CLIC6Q96NY7 704 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 UTYO14607 1347 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 TNKSO95271 1327 aa11.84□□□□□ -0.51
VPS18-201ENST00000220509 USP8P40818 1118 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 STAT6P42226 847 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 MAGEA9P43362 315 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 ARMCX5Q6P1M9 558 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 NYAP1Q6ZVC0 841 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 LCORLQ8N3X6 602 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 CRACR2AQ9BSW2 395 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 ADAM21Q9UKJ8 722 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 COL15A1P39059 1388 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 CARMIL3Q8ND23 1372 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 DYNLL1P63167 89 aaKnown RBP11.83□□□□□ -0.52
VPS18-201ENST00000220509 VPS72Q15906 364 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 ENOX2Q16206 610 aaKnown RBP11.83□□□□□ -0.52
VPS18-201ENST00000220509 ADALQ6DHV7 355 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 STOX1Q6ZVD7 989 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 TAX1BP1Q86VP1 789 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 CYP2D7A0A087X1C5 515 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 RBM47A0AV96 593 aaKnown RBP11.83□□□□□ -0.52
VPS18-201ENST00000220509 WTIPA6NIX2 430 aaPredicted RBP11.83□□□□□ -0.52
VPS18-201ENST00000220509 YEATS4O95619 227 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 PFKFB1P16118 471 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 GCKP35557 465 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 CASP7P55210 303 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 RWDD2BP57060 319 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 ADCY2Q08462 1091 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 CEP89Q96ST8 783 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 TRIM6Q9C030 488 aaPredicted RBP11.83□□□□□ -0.52
VPS18-201ENST00000220509 MAPK8IP1Q9UQF2 711 aa11.83□□□□□ -0.52
VPS18-201ENST00000220509 PXDNLA1KZ92 1463 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 ERLIN1O75477 346 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 WDHD1O75717 1129 aaPredicted RBP11.82□□□□□ -0.52
VPS18-201ENST00000220509 GNAQP50148 359 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 TFAP4Q01664 338 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 KRT27Q7Z3Y8 459 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 PARD6BQ9BYG5 372 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 CENPHQ9H3R5 247 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 ZSWIM5Q9P217 1185 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 RGPD1P0DJD0 1748 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 SMAPO00193 183 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 CAMTA2O94983 1202 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 HLA-DOAP06340 250 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 PEX19P40855 299 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 MYL5Q02045 173 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 SF3B2Q13435 895 aaKnown RBP11.82□□□□□ -0.52
VPS18-201ENST00000220509 CCDC178Q5BJE1 867 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 HHATQ5VTY9 493 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 TRMT44Q8IYL2 757 aaKnown RBP11.82□□□□□ -0.52
VPS18-201ENST00000220509 FANCBQ8NB91 859 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 TGFBRAP1Q8WUH2 860 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 GOLGA1Q92805 767 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 IRX2Q9BZI1 471 aaPredicted RBP11.82□□□□□ -0.52
VPS18-201ENST00000220509 BMP15O95972 392 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 RESTQ13127 1097 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 TRIM28Q13263 835 aaKnown RBP11.82□□□□□ -0.52
VPS18-201ENST00000220509 TMEM266Q2M3C6 531 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 PHC3Q8NDX5 983 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 CXorf38Q8TB03 319 aa11.82□□□□□ -0.52
VPS18-201ENST00000220509 ZMYM6O95789 1325 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 USP42Q9H9J4 1324 aaKnown RBP11.81□□□□□ -0.52
VPS18-201ENST00000220509 EP400Q96L91 3159 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 MYBL2P10244 700 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 KIAA1328Q86T90 577 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 DHX40Q8IX18 779 aaKnown RBP11.81□□□□□ -0.52
VPS18-201ENST00000220509 TRIM47Q96LD4 638 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 UBA5Q9GZZ9 404 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 CALML3P27482 149 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 NF2P35240 595 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 MTIF2P46199 727 aaKnown RBP11.81□□□□□ -0.52
VPS18-201ENST00000220509 PNOCQ13519 176 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 CCDC148Q8NFR7 591 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 BAG1Q99933 345 aaPredicted RBP11.81□□□□□ -0.52
VPS18-201ENST00000220509 KIAA1468Q9P260 1216 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 FAN1Q9Y2M0 1017 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 BCL9O00512 1426 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 PEX14O75381 377 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 DBN1Q16643 649 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 ZNF827Q17R98 1081 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 LONRF2Q1L5Z9 754 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 MUM1L1Q5H9M0 696 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms