RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.96■□□□□ 0.47
UPK3A-201ENST00000216211 MROH8Q9H579 483 aa17.96■□□□□ 0.47
UPK3A-201ENST00000216211 GOPCQ9HD26 462 aa17.96■□□□□ 0.47
UPK3A-201ENST00000216211 FBXO28Q9NVF7 368 aa17.96■□□□□ 0.47
UPK3A-201ENST00000216211 ROBO3Q96MS0 1386 aa17.95■□□□□ 0.46
UPK3A-201ENST00000216211 GPAA1O43292 621 aa17.95■□□□□ 0.46
UPK3A-201ENST00000216211 CYBAP13498 195 aa17.95■□□□□ 0.46
UPK3A-201ENST00000216211 RASA1P20936 1047 aa17.95■□□□□ 0.46
UPK3A-201ENST00000216211 FAM83BQ5T0W9 1011 aa17.95■□□□□ 0.46
UPK3A-201ENST00000216211 OLFML2BQ68BL8 750 aa17.95■□□□□ 0.46
UPK3A-201ENST00000216211 GIMAP6Q6P9H5 292 aa17.95■□□□□ 0.46
UPK3A-201ENST00000216211 MKNK2Q9HBH9 465 aa17.95■□□□□ 0.46
UPK3A-201ENST00000216211 EPB41L4AQ9HCS5 686 aaPredicted RBP17.95■□□□□ 0.46
UPK3A-201ENST00000216211 LAMA3Q16787 3333 aa17.95■□□□□ 0.46
UPK3A-201ENST00000216211 SMCHD1A6NHR9 2005 aa17.94■□□□□ 0.46
UPK3A-201ENST00000216211 SOX1O00570 391 aaPredicted RBP17.94■□□□□ 0.46
UPK3A-201ENST00000216211 MSCO60682 206 aa17.94■□□□□ 0.46
UPK3A-201ENST00000216211 ZFYP08048 801 aaPredicted RBP17.94■□□□□ 0.46
UPK3A-201ENST00000216211 BMP8BP34820 402 aa17.94■□□□□ 0.46
UPK3A-201ENST00000216211 SENP6Q9GZR1 1112 aaPredicted RBP17.94■□□□□ 0.46
UPK3A-201ENST00000216211 ADAMTS5Q9UNA0 930 aa17.94■□□□□ 0.46
UPK3A-201ENST00000216211 SUPT16HQ9Y5B9 1047 aaKnown RBP17.94■□□□□ 0.46
UPK3A-201ENST00000216211 TTC41PQ6P2S7 1318 aa17.94■□□□□ 0.46
UPK3A-201ENST00000216211 SLC25A27O95847 323 aa17.93■□□□□ 0.46
UPK3A-201ENST00000216211 APPP05067 770 aa17.93■□□□□ 0.46
UPK3A-201ENST00000216211 MAGEA10P43363 369 aaPredicted RBP17.93■□□□□ 0.46
UPK3A-201ENST00000216211 TDO2P48775 406 aa17.93■□□□□ 0.46
UPK3A-201ENST00000216211 ABRAQ8N0Z2 381 aa17.93■□□□□ 0.46
UPK3A-201ENST00000216211 OTUD7AQ8TE49 926 aaPredicted RBP17.93■□□□□ 0.46
UPK3A-201ENST00000216211 SEC62Q99442 399 aaKnown RBP17.93■□□□□ 0.46
UPK3A-201ENST00000216211 NUP88Q99567 741 aaPredicted RBP17.93■□□□□ 0.46
UPK3A-201ENST00000216211 SLC5A4Q9NY91 659 aa17.93■□□□□ 0.46
UPK3A-201ENST00000216211 PPP1R9AQ9ULJ8 1098 aa17.93■□□□□ 0.46
UPK3A-201ENST00000216211 VWA5AO00534 786 aa17.92■□□□□ 0.46
UPK3A-201ENST00000216211 NEFLP07196 543 aa17.92■□□□□ 0.46
UPK3A-201ENST00000216211 FCER1AP12319 257 aa17.92■□□□□ 0.46
UPK3A-201ENST00000216211 GNAT2P19087 354 aa17.92■□□□□ 0.46
UPK3A-201ENST00000216211 PRAMEF19Q5SWL8 479 aa17.92■□□□□ 0.46
UPK3A-201ENST00000216211 ANO1Q5XXA6 986 aa17.92■□□□□ 0.46
UPK3A-201ENST00000216211 PI4K2BQ8TCG2 481 aa17.92■□□□□ 0.46
UPK3A-201ENST00000216211 LRCH3Q96II8 777 aa17.92■□□□□ 0.46
UPK3A-201ENST00000216211 MAML3Q96JK9 1138 aa17.92■□□□□ 0.46
UPK3A-201ENST00000216211 NYAP2Q9P242 653 aa17.92■□□□□ 0.46
UPK3A-201ENST00000216211 PATL2C9JE40 543 aaKnown RBP17.91■□□□□ 0.46
UPK3A-201ENST00000216211 ERC2O15083 957 aa17.91■□□□□ 0.46
UPK3A-201ENST00000216211 PRDM1O75626 825 aa17.91■□□□□ 0.46
UPK3A-201ENST00000216211 STAT3P40763 770 aa17.91■□□□□ 0.46
UPK3A-201ENST00000216211 ATN1P54259 1190 aaPredicted RBP17.91■□□□□ 0.46
UPK3A-201ENST00000216211 LRRFIP1Q32MZ4 808 aaKnown RBP17.91■□□□□ 0.46
UPK3A-201ENST00000216211 GJC2Q5T442 439 aaPredicted RBP17.91■□□□□ 0.46
UPK3A-201ENST00000216211 RIOX2Q8IUF8 465 aa17.91■□□□□ 0.46
UPK3A-201ENST00000216211 IFNL3Q8IZI9 196 aa17.91■□□□□ 0.46
UPK3A-201ENST00000216211 REPS2Q8NFH8 660 aa17.91■□□□□ 0.46
UPK3A-201ENST00000216211 MMP19Q99542 508 aa17.91■□□□□ 0.46
UPK3A-201ENST00000216211 ZNF214Q9UL59 606 aaPredicted RBP17.91■□□□□ 0.46
UPK3A-201ENST00000216211 IGKV6D-41A0A0C4DH26 115 aa17.9■□□□□ 0.46
UPK3A-201ENST00000216211 F5H6K3 240 aa17.9■□□□□ 0.46
UPK3A-201ENST00000216211 DNM1LO00429 736 aa17.9■□□□□ 0.46
UPK3A-201ENST00000216211 SEPT4O43236 478 aa17.9■□□□□ 0.46
UPK3A-201ENST00000216211 PGK2P07205 417 aa17.9■□□□□ 0.46
UPK3A-201ENST00000216211 RRP1P56182 461 aaKnown RBP17.9■□□□□ 0.46
UPK3A-201ENST00000216211 KLRC3Q07444 240 aa17.9■□□□□ 0.46
UPK3A-201ENST00000216211 ZNF444Q8N0Y2 327 aaPredicted RBP17.9■□□□□ 0.46
UPK3A-201ENST00000216211 FSD1Q9BTV5 496 aa17.9■□□□□ 0.46
UPK3A-201ENST00000216211 CLIP2Q9UDT6 1046 aa17.9■□□□□ 0.46
UPK3A-201ENST00000216211 LTBP2Q14767 1821 aa17.9■□□□□ 0.46
UPK3A-201ENST00000216211 NDUFB10O96000 172 aa17.89■□□□□ 0.45
UPK3A-201ENST00000216211 SLF1Q9BQI6 1058 aa17.89■□□□□ 0.45
UPK3A-201ENST00000216211 UBE2OQ9C0C9 1292 aaKnown RBP17.89■□□□□ 0.45
UPK3A-201ENST00000216211 MYCNP04198 464 aaPredicted RBP17.88■□□□□ 0.45
UPK3A-201ENST00000216211 MX1P20591 662 aa17.88■□□□□ 0.45
UPK3A-201ENST00000216211 MDM2Q00987 491 aaPredicted RBP17.88■□□□□ 0.45
UPK3A-201ENST00000216211 KCTD2Q14681 263 aa17.88■□□□□ 0.45
UPK3A-201ENST00000216211 ARRDC4Q8NCT1 418 aa17.88■□□□□ 0.45
UPK3A-201ENST00000216211 CEP95Q96GE4 821 aa17.88■□□□□ 0.45
UPK3A-201ENST00000216211 ZNF287Q9HBT7 754 aa17.88■□□□□ 0.45
UPK3A-201ENST00000216211 MCM3APO60318 1980 aa17.88■□□□□ 0.45
UPK3A-201ENST00000216211 KBTBD13C9JR72 458 aa17.87■□□□□ 0.45
UPK3A-201ENST00000216211 COPB2P35606 906 aa17.87■□□□□ 0.45
UPK3A-201ENST00000216211 ZNF792Q3KQV3 632 aa17.87■□□□□ 0.45
UPK3A-201ENST00000216211 ZMYM1Q5SVZ6 1142 aa17.87■□□□□ 0.45
UPK3A-201ENST00000216211 TDHQ8IZJ6 230 aa17.87■□□□□ 0.45
UPK3A-201ENST00000216211 CRBNQ96SW2 442 aa17.87■□□□□ 0.45
UPK3A-201ENST00000216211 NACAP1Q9BZK3 213 aa17.87■□□□□ 0.45
UPK3A-201ENST00000216211 MTMR4Q9NYA4 1195 aa17.87■□□□□ 0.45
UPK3A-201ENST00000216211 SALL3Q9BXA9 1300 aa17.87■□□□□ 0.45
UPK3A-201ENST00000216211 SLC4A3P48751 1232 aa17.86■□□□□ 0.45
UPK3A-201ENST00000216211 RTP1P59025 263 aa17.86■□□□□ 0.45
UPK3A-201ENST00000216211 PDE4BQ07343 736 aa17.86■□□□□ 0.45
UPK3A-201ENST00000216211 FAM47AQ5JRC9 791 aa17.86■□□□□ 0.45
UPK3A-201ENST00000216211 ANKRD45Q5TZF3 282 aa17.86■□□□□ 0.45
UPK3A-201ENST00000216211 SNRNP48Q6IEG0 339 aaKnown RBP17.86■□□□□ 0.45
UPK3A-201ENST00000216211 CCDC129Q6ZRS4 1044 aa17.86■□□□□ 0.45
UPK3A-201ENST00000216211 LRRC47Q8N1G4 583 aaKnown RBP17.86■□□□□ 0.45
UPK3A-201ENST00000216211 PRPF38AQ8NAV1 312 aaKnown RBP17.86■□□□□ 0.45
UPK3A-201ENST00000216211 MKL1Q969V6 931 aa17.86■□□□□ 0.45
UPK3A-201ENST00000216211 KIFC2Q96AC6 838 aa17.86■□□□□ 0.45
UPK3A-201ENST00000216211 TINF2Q9BSI4 451 aa17.86■□□□□ 0.45
UPK3A-201ENST00000216211 NAPBQ9H115 298 aa17.86■□□□□ 0.45
UPK3A-201ENST00000216211 ATP11BQ9Y2G3 1177 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms