RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 ANKRD1Q15327 319 aa23.6■■□□□ 1.37
RHBDD3-201ENST00000216085 CCDC96Q2M329 555 aa23.6■■□□□ 1.37
RHBDD3-201ENST00000216085 TREML2Q5T2D2 321 aa23.6■■□□□ 1.37
RHBDD3-201ENST00000216085 PARK7Q99497 189 aaKnown RBP23.6■■□□□ 1.37
RHBDD3-201ENST00000216085 BEGAINQ9BUH8 593 aa23.6■■□□□ 1.37
RHBDD3-201ENST00000216085 BMP3P12645 472 aa23.6■■□□□ 1.37
RHBDD3-201ENST00000216085 HOXA7P31268 230 aaPredicted RBP23.6■■□□□ 1.37
RHBDD3-201ENST00000216085 NEK4P51957 841 aa23.6■■□□□ 1.37
RHBDD3-201ENST00000216085 COL9A3Q14050 684 aaPredicted RBP23.6■■□□□ 1.37
RHBDD3-201ENST00000216085 FAM83BQ5T0W9 1011 aa23.59■■□□□ 1.37
RHBDD3-201ENST00000216085 GPATCH4Q5T3I0 446 aaKnown RBP23.59■■□□□ 1.37
RHBDD3-201ENST00000216085 GPAT2Q6NUI2 795 aa23.59■■□□□ 1.37
RHBDD3-201ENST00000216085 ZNF654Q8IZM8 581 aa23.59■■□□□ 1.37
RHBDD3-201ENST00000216085 FAM43AQ8N2R8 423 aa23.59■■□□□ 1.37
RHBDD3-201ENST00000216085 DNAJC5GQ8N7S2 189 aa23.59■■□□□ 1.37
RHBDD3-201ENST00000216085 BRF1Q92994 677 aa23.59■■□□□ 1.37
RHBDD3-201ENST00000216085 PTPN18Q99952 460 aa23.59■■□□□ 1.37
RHBDD3-201ENST00000216085 CEP350Q5VT06 3117 aa23.58■■□□□ 1.37
RHBDD3-201ENST00000216085 IGF2BP3O00425 579 aaKnown RBP eCLIP23.58■■□□□ 1.37
RHBDD3-201ENST00000216085 PDHBP11177 359 aa23.58■■□□□ 1.37
RHBDD3-201ENST00000216085 IKQ13123 557 aaPredicted RBP23.58■■□□□ 1.37
RHBDD3-201ENST00000216085 ASPRV1Q53RT3 343 aa23.58■■□□□ 1.37
RHBDD3-201ENST00000216085 PARP1P09874 1014 aaKnown RBP23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 KIF5BP33176 963 aa23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 KIAA1755Q5JYT7 1200 aa23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 CTCFLQ8NI51 663 aaPredicted RBP23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 SMCR8Q8TEV9 937 aaPredicted RBP23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 AGXT2Q9BYV1 514 aa23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 GPHNQ9NQX3 736 aaPredicted RBP23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 NAP1L2Q9ULW6 460 aaPredicted RBP23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 FLOT1O75955 427 aa23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 SNHG28P0DPA3 235 aa23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 STAT2P52630 851 aa23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 TAF1CQ15572 869 aaPredicted RBP23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 CATSPERGQ6ZRH7 1159 aa23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 GTF3C2Q8WUA4 911 aaPredicted RBP23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 NUP133Q8WUM0 1156 aa23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 NUP88Q99567 741 aaPredicted RBP23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 ALDH8A1Q9H2A2 487 aaPredicted RBP23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 SENP2Q9HC62 589 aa23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 FEM1BQ9UK73 627 aa23.57■■□□□ 1.36
RHBDD3-201ENST00000216085 KLF18A0A0U1RQI7 1052 aa23.56■■□□□ 1.36
RHBDD3-201ENST00000216085 ST18O60284 1047 aa23.56■■□□□ 1.36
RHBDD3-201ENST00000216085 RCAN1P53805 252 aa23.56■■□□□ 1.36
RHBDD3-201ENST00000216085 FAM160B2Q86V87 743 aa23.56■■□□□ 1.36
RHBDD3-201ENST00000216085 CHURC1Q8WUH1 139 aa23.56■■□□□ 1.36
RHBDD3-201ENST00000216085 MAP3K14Q99558 947 aa23.56■■□□□ 1.36
RHBDD3-201ENST00000216085 ZFYVE28Q9HCC9 887 aa23.56■■□□□ 1.36
RHBDD3-201ENST00000216085 MYPNQ86TC9 1320 aa23.56■■□□□ 1.36
RHBDD3-201ENST00000216085 ZBTB43O43298 467 aa23.55■■□□□ 1.36
RHBDD3-201ENST00000216085 APOA5Q6Q788 366 aa23.55■■□□□ 1.36
RHBDD3-201ENST00000216085 KIF2CQ99661 725 aa23.55■■□□□ 1.36
RHBDD3-201ENST00000216085 ASCC2Q9H1I8 757 aaPredicted RBP23.55■■□□□ 1.36
RHBDD3-201ENST00000216085 HOXC10Q9NYD6 342 aa23.55■■□□□ 1.36
RHBDD3-201ENST00000216085 TMEM232C9JQI7 657 aa23.55■■□□□ 1.36
RHBDD3-201ENST00000216085 CA12O43570 354 aa23.55■■□□□ 1.36
RHBDD3-201ENST00000216085 ZNF543Q08ER8 600 aa23.55■■□□□ 1.36
RHBDD3-201ENST00000216085 TROAPQ12815 778 aa23.55■■□□□ 1.36
RHBDD3-201ENST00000216085 COG2Q14746 738 aa23.55■■□□□ 1.36
RHBDD3-201ENST00000216085 KCTD1Q719H9 257 aa23.55■■□□□ 1.36
RHBDD3-201ENST00000216085 MICU3Q86XE3 530 aa23.55■■□□□ 1.36
RHBDD3-201ENST00000216085 CHMP4CQ96CF2 233 aa23.55■■□□□ 1.36
RHBDD3-201ENST00000216085 SLF1Q9BQI6 1058 aa23.55■■□□□ 1.36
RHBDD3-201ENST00000216085 GOLGA8BA8MQT2 603 aa23.54■■□□□ 1.36
RHBDD3-201ENST00000216085 APOBRQ0VD83 1088 aa23.54■■□□□ 1.36
RHBDD3-201ENST00000216085 SAGE1Q9NXZ1 904 aa23.54■■□□□ 1.36
RHBDD3-201ENST00000216085 FRMPD2Q68DX3 1309 aaPredicted RBP23.54■■□□□ 1.36
RHBDD3-201ENST00000216085 PLA2G6O60733 806 aa23.53■■□□□ 1.36
RHBDD3-201ENST00000216085 GNAQP50148 359 aa23.53■■□□□ 1.36
RHBDD3-201ENST00000216085 TOB2Q14106 344 aaPredicted RBP23.53■■□□□ 1.36
RHBDD3-201ENST00000216085 GRM4Q14833 912 aa23.53■■□□□ 1.36
RHBDD3-201ENST00000216085 PRPF38AQ8NAV1 312 aaKnown RBP23.53■■□□□ 1.36
RHBDD3-201ENST00000216085 CTDP1Q9Y5B0 961 aaPredicted RBP23.53■■□□□ 1.36
RHBDD3-201ENST00000216085 GCLCP48506 637 aaPredicted RBP23.52■■□□□ 1.36
RHBDD3-201ENST00000216085 AK2P54819 239 aa23.52■■□□□ 1.36
RHBDD3-201ENST00000216085 PPP2R5BQ15173 497 aa23.52■■□□□ 1.36
RHBDD3-201ENST00000216085 SAMD1Q6SPF0 538 aaPredicted RBP23.52■■□□□ 1.36
RHBDD3-201ENST00000216085 MYL10Q9BUA6 226 aa23.52■■□□□ 1.36
RHBDD3-201ENST00000216085 GPCPD1Q9NPB8 672 aa23.52■■□□□ 1.36
RHBDD3-201ENST00000216085 RBM28Q9NW13 759 aaKnown RBP23.52■■□□□ 1.36
RHBDD3-201ENST00000216085 PPP1R9AQ9ULJ8 1098 aa23.52■■□□□ 1.36
RHBDD3-201ENST00000216085 CCDC196A0A1B0GTZ2 297 aa23.52■■□□□ 1.36
RHBDD3-201ENST00000216085 FDX1P10109 184 aa23.52■■□□□ 1.36
RHBDD3-201ENST00000216085 CYP2C8P10632 490 aa23.52■■□□□ 1.36
RHBDD3-201ENST00000216085 HERVK_113P62684 666 aa23.52■■□□□ 1.36
RHBDD3-201ENST00000216085 BRPF3Q9ULD4 1205 aa23.52■■□□□ 1.36
RHBDD3-201ENST00000216085 GOLGA8AA7E2F4 631 aa23.51■■□□□ 1.35
RHBDD3-201ENST00000216085 METAP2P50579 478 aaKnown RBP eCLIP23.51■■□□□ 1.35
RHBDD3-201ENST00000216085 EVCP57679 992 aa23.51■■□□□ 1.35
RHBDD3-201ENST00000216085 RASGRP2Q7LDG7 609 aa23.51■■□□□ 1.35
RHBDD3-201ENST00000216085 MB21D1Q8N884 522 aa23.51■■□□□ 1.35
RHBDD3-201ENST00000216085 KIFC2Q96AC6 838 aa23.51■■□□□ 1.35
RHBDD3-201ENST00000216085 LZTS2Q9BRK4 669 aa23.51■■□□□ 1.35
RHBDD3-201ENST00000216085 RNF186Q9NXI6 227 aa23.51■■□□□ 1.35
RHBDD3-201ENST00000216085 GOLGA8HP0CJ92 632 aa23.5■■□□□ 1.35
RHBDD3-201ENST00000216085 DSG3P32926 999 aa23.5■■□□□ 1.35
RHBDD3-201ENST00000216085 RTN1Q16799 776 aa23.5■■□□□ 1.35
RHBDD3-201ENST00000216085 FANCBQ8NB91 859 aa23.5■■□□□ 1.35
RHBDD3-201ENST00000216085 ZNF274Q96GC6 653 aaPredicted RBP23.5■■□□□ 1.35
RHBDD3-201ENST00000216085 P2RX7Q99572 595 aaKnown RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms