RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CCDC14Q49A88 953 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 LRRC8AQ8IWT6 810 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 ARFGAP2Q8N6H7 521 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 BRD1O95696 1058 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 GAS8O95995 478 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 IGBP1P78318 339 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 LARGE2Q8N3Y3 721 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 PANK4Q9NVE7 773 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 KIAA1468Q9P260 1216 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 FAM184BQ9ULE4 1060 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 CTTNBP2Q8WZ74 1663 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 CLGNO14967 610 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 PRPF6O94906 941 aaKnown RBP15.04■□□□□ -0
TGFBR3-201ENST00000212355 NXNQ6DKJ4 435 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 ZNF589Q86UQ0 364 aaPredicted RBP15.04■□□□□ -0
TGFBR3-201ENST00000212355 KIAA1524Q8TCG1 905 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 CAPN7Q9Y6W3 813 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 CFAP221Q4G0U5 840 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 NBPF14Q5TI25 921 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 MYSM1Q5VVJ2 828 aa15.04■□□□□ -0
TGFBR3-201ENST00000212355 HSPD1P10809 573 aaKnown RBP15.03■□□□□ -0
TGFBR3-201ENST00000212355 LIG3P49916 1009 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 CTSWP56202 376 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 EAPPQ56P03 285 aaPredicted RBP15.03■□□□□ -0
TGFBR3-201ENST00000212355 TMTC1Q8IUR5 882 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 IFNL3Q8IZI9 196 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 ZSCAN10Q96SZ4 725 aaPredicted RBP15.03■□□□□ -0
TGFBR3-201ENST00000212355 MTMR6Q9Y217 621 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 KRIT1O00522 736 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 ARHGAP6O43182 974 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 FOXD4Q12950 439 aaPredicted RBP15.03■□□□□ -0
TGFBR3-201ENST00000212355 CERS3Q8IU89 383 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 PPFIBP2Q8ND30 876 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 CCDC127Q96BQ5 260 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 USP44Q9H0E7 712 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 B4DLN1 442 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 RASSF7Q02833 373 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 SNX1Q13596 522 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 PPP2R5AQ15172 486 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 DIXDC1Q155Q3 683 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 PI16Q6UXB8 463 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 NACA2Q9H009 215 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 RTEL1Q9NZ71 1219 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 SAR1BQ9Y6B6 198 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 B4GALNT4Q76KP1 1039 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 AFG3L2Q9Y4W6 797 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 COL17A1Q9UMD9 1497 aaPredicted RBP15.03■□□□□ -0
TGFBR3-201ENST00000212355 KDRP35968 1356 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 VWA3BQ502W6 1294 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 RASEFQ8IZ41 740 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 REXO1Q8N1G1 1221 aaKnown RBP15.03■□□□□ -0
TGFBR3-201ENST00000212355 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.03■□□□□ -01e-7■■■■■ 29.1
TGFBR3-201ENST00000212355 ANKFY1Q9P2R3 1169 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 UBN2Q6ZU65 1347 aa15.03■□□□□ -0
TGFBR3-201ENST00000212355 C11orf57Q6ZUT1 292 aaPredicted RBP15.02■□□□□ -0
TGFBR3-201ENST00000212355 KIAA0825Q8IV33 1275 aa15.02■□□□□ -0
TGFBR3-201ENST00000212355 CCDC87Q9NVE4 849 aa15.02■□□□□ -0
TGFBR3-201ENST00000212355 BAG2O95816 211 aa15.02■□□□□ -0
TGFBR3-201ENST00000212355 FGAP02671 866 aa15.02■□□□□ -0
TGFBR3-201ENST00000212355 ALDH3A1P30838 453 aa15.02■□□□□ -0
TGFBR3-201ENST00000212355 C2orf54Q08AI8 447 aa15.02■□□□□ -0
TGFBR3-201ENST00000212355 CCDC13Q8IYE1 715 aa15.02■□□□□ -0
TGFBR3-201ENST00000212355 MMS19Q96T76 1030 aa15.02■□□□□ -0
TGFBR3-201ENST00000212355 PDE11AQ9HCR9 933 aa15.02■□□□□ -0
TGFBR3-201ENST00000212355 IMPACTQ9P2X3 320 aa15.02■□□□□ -0
TGFBR3-201ENST00000212355 GBP1P32455 592 aa15.02■□□□□ -0
TGFBR3-201ENST00000212355 ATL3Q6DD88 541 aa15.02■□□□□ -0
TGFBR3-201ENST00000212355 IL17REQ8NFR9 667 aa15.02■□□□□ -0
TGFBR3-201ENST00000212355 ALAS1P13196 640 aa15.02□□□□□ -0.01
TGFBR3-201ENST00000212355 DYNLL1P63167 89 aaKnown RBP15.02□□□□□ -0.01
TGFBR3-201ENST00000212355 TRAF1Q13077 416 aa15.02□□□□□ -0.01
TGFBR3-201ENST00000212355 CFAP57Q96MR6 1250 aa15.02□□□□□ -0.01
TGFBR3-201ENST00000212355 CSRNP2Q9H175 543 aa15.02□□□□□ -0.01
TGFBR3-201ENST00000212355 ANTXR1Q9H6X2 564 aa15.02□□□□□ -0.01
TGFBR3-201ENST00000212355 C19orf44Q9H6X5 657 aa15.02□□□□□ -0.01
TGFBR3-201ENST00000212355 SWAP70Q9UH65 585 aa15.02□□□□□ -0.01
TGFBR3-201ENST00000212355 ATP5DP30049 168 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 MED10Q9BTT4 135 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 GREM2Q9H772 168 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 K7ENM7 598 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 GAS7O60861 476 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 SH2D4BQ5SQS7 431 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 MFSD14BQ5SR56 506 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 KCTD1Q719H9 257 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 APOL6Q9BWW8 343 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 MEIS1O00470 390 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 GMNNO75496 209 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 ADCY8P40145 1251 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 KRT25Q7Z3Z0 450 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 NOSTRINQ8IVI9 506 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 GPR101Q96P66 508 aaPredicted RBP15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 NUP58Q9BVL2 599 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 LAMC3Q9Y6N6 1575 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 TUBB4AP04350 444 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 POLD1P28340 1107 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 SLC16A2P36021 539 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 ITKQ08881 620 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 PAK2Q13177 524 aa15.01□□□□□ -0.01
TGFBR3-201ENST00000212355 ZSCAN26Q16670 478 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms