RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 ATG9AQ7Z3C6 839 aa11.57□□□□□ -0.56
CHERP-201ENST00000198939 VPS37DQ86XT2 251 aa11.57□□□□□ -0.56
CHERP-201ENST00000198939 SLC35F6Q8N357 371 aa11.57□□□□□ -0.56
CHERP-201ENST00000198939 KLHDC4Q8TBB5 520 aa11.57□□□□□ -0.56
CHERP-201ENST00000198939 JPH2Q9BR39 696 aaPredicted RBP11.57□□□□□ -0.56
CHERP-201ENST00000198939 NDUFB9Q9Y6M9 179 aa11.57□□□□□ -0.56
CHERP-201ENST00000198939 GOLGA6CA6NDK9 693 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 LRRIQ3A6PVS8 624 aaPredicted RBP11.56□□□□□ -0.56
CHERP-201ENST00000198939 GOLGA6DP0CG33 693 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 TFCP2Q12800 502 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 WHAMMP3Q1A5X7 153 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 RPAINQ86UA6 219 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 HOMEZQ8IX15 550 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 MSL3Q8N5Y2 521 aaKnown RBP11.56□□□□□ -0.56
CHERP-201ENST00000198939 IGSF22Q8N9C0 903 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 NEUROD6Q96NK8 337 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 GOLGA6AQ9NYA3 693 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 C6orf229H3BNL8 230 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 NEBLO76041 1014 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 SASH1O94885 1247 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 FILIP1LQ4L180 1135 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 TMEM139Q8IV31 216 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 PUS3Q9BZE2 481 aaKnown RBP11.56□□□□□ -0.56
CHERP-201ENST00000198939 CAPN7Q9Y6W3 813 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 GRIN3BO60391 1043 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 ATP2C2O75185 946 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 PDIA3P30101 505 aaKnown RBP11.56□□□□□ -0.56
CHERP-201ENST00000198939 GBP2P32456 591 aaPredicted RBP11.56□□□□□ -0.56
CHERP-201ENST00000198939 LRCH2Q5VUJ6 765 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 RAB11FIP4Q86YS3 637 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 FAM212AQ96EL1 285 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 MED23Q9ULK4 1368 aa11.56□□□□□ -0.56
CHERP-201ENST00000198939 OTUD6BQ8N6M0 293 aa11.55□□□□□ -0.56
CHERP-201ENST00000198939 ZC3H12CQ9C0D7 883 aaKnown RBP11.55□□□□□ -0.56
CHERP-201ENST00000198939 PCDHA5Q9Y5H7 936 aa11.55□□□□□ -0.56
CHERP-201ENST00000198939 ZNF804BA4D1E1 1349 aa11.55□□□□□ -0.56
CHERP-201ENST00000198939 TNNI3KQ59H18 835 aa11.55□□□□□ -0.56
CHERP-201ENST00000198939 ZNF804AQ7Z570 1209 aa11.55□□□□□ -0.56
CHERP-201ENST00000198939 TRMT44Q8IYL2 757 aaKnown RBP11.55□□□□□ -0.56
CHERP-201ENST00000198939 FPGT-TNNI3KV9GXZ4 949 aa11.55□□□□□ -0.56
CHERP-201ENST00000198939 SSBP05455 408 aaKnown RBP eCLIP11.55□□□□□ -0.56
CHERP-201ENST00000198939 UQCRFS1P1P0C7P4 283 aa11.55□□□□□ -0.56
CHERP-201ENST00000198939 PCMTD1Q96MG8 357 aaPredicted RBP11.55□□□□□ -0.56
CHERP-201ENST00000198939 ADGRG1Q9Y653 693 aa11.55□□□□□ -0.56
CHERP-201ENST00000198939 UFL1O94874 794 aa11.55□□□□□ -0.56
CHERP-201ENST00000198939 KCNA3P22001 575 aa11.55□□□□□ -0.56
CHERP-201ENST00000198939 GSCP56915 257 aaPredicted RBP11.55□□□□□ -0.56
CHERP-201ENST00000198939 PSMD1Q99460 953 aa11.55□□□□□ -0.56
CHERP-201ENST00000198939 SNRKQ9NRH2 765 aa11.55□□□□□ -0.56
CHERP-201ENST00000198939 C21orf2O43822 256 aa11.54□□□□□ -0.56
CHERP-201ENST00000198939 NAA25Q14CX7 972 aa11.54□□□□□ -0.56
CHERP-201ENST00000198939 C15orf52Q6ZUT6 534 aaKnown RBP11.54□□□□□ -0.56
CHERP-201ENST00000198939 RIN2Q8WYP3 895 aaPredicted RBP11.54□□□□□ -0.56
CHERP-201ENST00000198939 ZNF274Q96GC6 653 aaPredicted RBP11.54□□□□□ -0.56
CHERP-201ENST00000198939 TUBE1Q9UJT0 475 aa11.54□□□□□ -0.56
CHERP-201ENST00000198939 TTF2Q9UNY4 1162 aaKnown RBP11.54□□□□□ -0.56
CHERP-201ENST00000198939 KIF13BQ9NQT8 1826 aa11.54□□□□□ -0.56
CHERP-201ENST00000198939 NAA15Q9BXJ9 866 aaKnown RBP11.54□□□□□ -0.56
CHERP-201ENST00000198939 HSD3B7Q9H2F3 369 aa11.54□□□□□ -0.56
CHERP-201ENST00000198939 MYO6Q9UM54 1294 aa11.54□□□□□ -0.56
CHERP-201ENST00000198939 GOLGA8BA8MQT2 603 aa11.54□□□□□ -0.56
CHERP-201ENST00000198939 TFRCP02786 760 aaKnown RBP11.54□□□□□ -0.56
CHERP-201ENST00000198939 GPSM2P81274 684 aa11.54□□□□□ -0.56
CHERP-201ENST00000198939 KLHL10Q6JEL2 608 aa11.54□□□□□ -0.56
CHERP-201ENST00000198939 CABS1Q96KC9 395 aa11.54□□□□□ -0.56
CHERP-201ENST00000198939 CAPS2Q9BXY5 557 aa11.54□□□□□ -0.56
CHERP-201ENST00000198939 TNRC6CQ9HCJ0 1690 aaKnown RBP11.53□□□□□ -0.56
CHERP-201ENST00000198939 TRIM29Q14134 588 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 NCAPH2Q6IBW4 605 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 NOA1Q8NC60 698 aaKnown RBP11.53□□□□□ -0.56
CHERP-201ENST00000198939 GJB4Q9NTQ9 266 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 ZNF219Q9P2Y4 722 aaPredicted RBP11.53□□□□□ -0.56
CHERP-201ENST00000198939 LRP5O75197 1615 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 GNGT1P63211 74 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 FKBP4Q02790 459 aaKnown RBP eCLIP11.53□□□□□ -0.56
CHERP-201ENST00000198939 SLC39A14Q15043 492 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 GPR162Q16538 588 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 TTC39AQ5SRH9 613 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 STOX1Q6ZVD7 989 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.53□□□□□ -0.56
CHERP-201ENST00000198939 RTFDC1Q9BY42 306 aaPredicted RBP11.53□□□□□ -0.56
CHERP-201ENST00000198939 VIPAS39Q9H9C1 493 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 KCNH3Q9ULD8 1083 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 SAMM50Q9Y512 469 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 ANKRD31Q8N7Z5 1873 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 KLF18A0A0U1RQI7 1052 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 GOLGA6BA6NDN3 693 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 NDUFAB1O14561 156 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 SEMA3EO15041 775 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 GGCXP38435 758 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 NAP1L1P55209 391 aaKnown RBP11.53□□□□□ -0.56
CHERP-201ENST00000198939 TRDNQ13061 729 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 TBX2Q13207 712 aaPredicted RBP11.53□□□□□ -0.56
CHERP-201ENST00000198939 WASHC4Q2M389 1173 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 HELBQ8NG08 1087 aaPredicted RBP11.53□□□□□ -0.56
CHERP-201ENST00000198939 C7orf43Q8WVR3 580 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 TAOK3Q9H2K8 898 aa11.53□□□□□ -0.56
CHERP-201ENST00000198939 RASSF8Q8NHQ8 419 aa11.52□□□□□ -0.56
CHERP-201ENST00000198939 TBC1D16Q8TBP0 767 aa11.52□□□□□ -0.56
CHERP-201ENST00000198939 KAT2BQ92831 832 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms