RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 KCNQ2O43526 872 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 SPOPO43791 374 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 TNNI1P19237 187 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 HSPA1LP34931 641 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 KRT9P35527 623 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 UTP14CQ5TAP6 766 aaKnown RBP12.33□□□□□ -0.44
RGPD5-201ENST00000016946 FAM160B1Q5W0V3 765 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 MAK16Q9BXY0 300 aaKnown RBP12.33□□□□□ -0.44
RGPD5-201ENST00000016946 NACA2Q9H009 215 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 CRB1P82279 1406 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 MYO3BQ8WXR4 1341 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 PRKAB2O43741 272 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 CCDC122Q5T0U0 273 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 NFE2L3Q9Y4A8 694 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 CARMIL3Q8ND23 1372 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 BTBD18B2RXH4 712 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 PRPF6O94906 941 aaKnown RBP12.33□□□□□ -0.44
RGPD5-201ENST00000016946 EN1Q05925 392 aaPredicted RBP12.33□□□□□ -0.44
RGPD5-201ENST00000016946 SLC10A4Q96EP9 437 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 GPR101Q96P66 508 aaPredicted RBP12.33□□□□□ -0.44
RGPD5-201ENST00000016946 OSBPL3Q9H4L5 887 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 DDX25Q9UHL0 483 aaKnown RBP12.33□□□□□ -0.44
RGPD5-201ENST00000016946 TECP42680 631 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 VPS72Q15906 364 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 SEL1L2Q5TEA6 688 aa12.33□□□□□ -0.44
RGPD5-201ENST00000016946 SORBS3O60504 671 aa12.32□□□□□ -0.44
RGPD5-201ENST00000016946 NR1I2O75469 434 aa12.32□□□□□ -0.44
RGPD5-201ENST00000016946 FERP16591 822 aa12.32□□□□□ -0.44
RGPD5-201ENST00000016946 PPP1R9BQ96SB3 815 aa12.32□□□□□ -0.44
RGPD5-201ENST00000016946 BLZF1Q9H2G9 400 aa12.32□□□□□ -0.44
RGPD5-201ENST00000016946 P4HA1P13674 534 aa12.32□□□□□ -0.44
RGPD5-201ENST00000016946 SERTAD1Q9UHV2 236 aa12.32□□□□□ -0.44
RGPD5-201ENST00000016946 TPCN1Q9ULQ1 816 aa12.32□□□□□ -0.44
RGPD5-201ENST00000016946 CYP21A2P08686 494 aa12.32□□□□□ -0.44
RGPD5-201ENST00000016946 PDIA3P30101 505 aaKnown RBP12.32□□□□□ -0.44
RGPD5-201ENST00000016946 ARL1P40616 181 aaPredicted RBP12.32□□□□□ -0.44
RGPD5-201ENST00000016946 CCDC84Q86UT8 332 aaPredicted RBP12.32□□□□□ -0.44
RGPD5-201ENST00000016946 CDC42BPGQ6DT37 1551 aa12.32□□□□□ -0.44
RGPD5-201ENST00000016946 KARSQ15046 597 aaKnown RBP12.32□□□□□ -0.44
RGPD5-201ENST00000016946 MIGA2Q7L4E1 593 aa12.32□□□□□ -0.44
RGPD5-201ENST00000016946 SRRTQ9BXP5 876 aaKnown RBP12.32□□□□□ -0.44
RGPD5-201ENST00000016946 MECOMQ03112 1051 aa12.32□□□□□ -0.44
RGPD5-201ENST00000016946 NOLC1Q14978 699 aaKnown RBP eCLIP12.32□□□□□ -0.44
RGPD5-201ENST00000016946 APOA5Q6Q788 366 aa12.32□□□□□ -0.44
RGPD5-201ENST00000016946 KIAA1524Q8TCG1 905 aa12.32□□□□□ -0.44
RGPD5-201ENST00000016946 BAG1Q99933 345 aaPredicted RBP12.32□□□□□ -0.44
RGPD5-201ENST00000016946 A0A1W2PRG0 241 aa12.32□□□□□ -0.44
RGPD5-201ENST00000016946 INCENPQ9NQS7 918 aa12.32□□□□□ -0.44
RGPD5-201ENST00000016946 hCG_1984214I3L0E3 225 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 LIG4P49917 911 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 YWHAEP62258 255 aaKnown RBP12.31□□□□□ -0.44
RGPD5-201ENST00000016946 CALCOCO2Q13137 446 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 ASIC2Q16515 512 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 ZNF713Q8N859 430 aaPredicted RBP12.31□□□□□ -0.44
RGPD5-201ENST00000016946 NUP58Q9BVL2 599 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 AP5M1Q9H0R1 490 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 C1orf167Q5SNV9 1468 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 PALM3A6NDB9 673 aaPredicted RBP12.31□□□□□ -0.44
RGPD5-201ENST00000016946 ATP6V0A1Q93050 837 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 RNF26Q9BY78 433 aaPredicted RBP12.31□□□□□ -0.44
RGPD5-201ENST00000016946 LSG1Q9H089 658 aaKnown RBP12.31□□□□□ -0.44
RGPD5-201ENST00000016946 USP31Q70CQ4 1352 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 HSF2BPO75031 334 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 BCRP11274 1271 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 ZNF569Q5MCW4 686 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 ADALQ6DHV7 355 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 RFX1P22670 979 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 KCTD1Q719H9 257 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 PUS7LQ9H0K6 701 aaKnown RBP12.31□□□□□ -0.44
RGPD5-201ENST00000016946 NLRP12P59046 1061 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 SLC9C1Q4G0N8 1177 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 RDH13Q8NBN7 331 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 NELFBQ8WX92 580 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 TSGA10Q9BZW7 698 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 TAB2Q9NYJ8 693 aa12.31□□□□□ -0.44
RGPD5-201ENST00000016946 TNNC1P63316 161 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 MYOCDQ8IZQ8 938 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 OSBP2Q969R2 916 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 PIH1D3Q9NQM4 214 aaKnown RBP12.3□□□□□ -0.44
RGPD5-201ENST00000016946 TXNDC16Q9P2K2 825 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 CPSF1Q10570 1443 aaKnown RBP12.3□□□□□ -0.44
RGPD5-201ENST00000016946 IGKV5-2P06315 115 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 COL4A3BPQ9Y5P4 624 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 CDHR2Q9BYE9 1310 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 M0R2C6 588 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 ERCC3P19447 782 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 TBC1D9BQ66K14 1250 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 DCUN1D2Q6PH85 259 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 SPON1Q9HCB6 807 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 ASNSP08243 561 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 ATP2A2P16615 1042 aaKnown RBP12.3□□□□□ -0.44
RGPD5-201ENST00000016946 IGBP1P78318 339 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 FANCCQ00597 558 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 PPP1R7Q15435 360 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 C2orf69Q8N8R5 385 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 GOLGA5Q8TBA6 731 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 CTTNBP2NLQ9P2B4 639 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 FAM169AQ9Y6X4 670 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 SLC16A2P36021 539 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 YARSP54577 528 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms