RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 TOGARAM1Q9Y4F4 1720 aa13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 MAST3O60307 1309 aa13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 CNTNAP4Q9C0A0 1308 aa13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 ITGB4P16144 1822 aa13.56□□□□□ -0.24
TSPAN9-201ENST00000011898 ERVV-1B6SEH8 477 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 PPP1R12BO60237 982 aaPredicted RBP13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 GNGT1P63211 74 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 TCERG1LQ5VWI1 586 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 C11orf57Q6ZUT1 292 aaPredicted RBP13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 STAMQ92783 540 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 RTEL1Q9NZ71 1219 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 MORC2Q9Y6X9 1032 aaPredicted RBP13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 GOLGA6BA6NDN3 693 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 KMT5BQ4FZB7 885 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 IFT81Q8WYA0 676 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 PRM3Q9NNZ6 103 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 FAN1Q9Y2M0 1017 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 MRFAP1Q9Y605 127 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 BTBD18B2RXH4 712 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 KRT86O43790 486 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 KIF1CO43896 1103 aaKnown RBP13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 PDE6AP16499 860 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 DDIT3P35638 169 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 VPS36Q86VN1 386 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 CMTR1Q8N1G2 835 aaKnown RBP13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 TBC1D31Q96DN5 1066 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 MMRN2Q9H8L6 949 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 SWAP70Q9UH65 585 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 ADAM21Q9UKJ8 722 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 ATP10DQ9P241 1426 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 GCOM1H8Y6P7 765 aaPredicted RBP13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 RPS6KA4O75676 772 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 MYZAPP0CAP1 466 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 KIF5AQ12840 1032 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 BRD3Q15059 726 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 CCDC42Q96M95 316 aa13.55□□□□□ -0.24
TSPAN9-201ENST00000011898 A0A1W2PQ27 194 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 A0A1W2PQ64 194 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 A0A1W2PQD8 194 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 EFCAB8A8MWE9 144 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 VAV2P52735 878 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 RESTQ13127 1097 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 DPCR1Q3MIW9 517 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 CLIC6Q96NY7 704 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 FAM204AQ9H8W3 233 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 GPR108Q9NPR9 543 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 HGSO14964 777 aaPredicted RBP13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 KCNQ4P56696 695 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 KRT83P78385 493 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 TOB2Q14106 344 aaPredicted RBP13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 DIXDC1Q155Q3 683 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 PARP10Q53GL7 1025 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 PIK3AP1Q6ZUJ8 805 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 OSBP2Q969R2 916 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 PDE6BP35913 854 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 TTLL12Q14166 644 aaPredicted RBP13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 ILDR1Q86SU0 546 aaPredicted RBP13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 TADA2BQ86TJ2 420 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 NOSTRINQ8IVI9 506 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 ZBTB38Q8NAP3 1195 aaPredicted RBP13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 LINC00116Q8NCU8 138 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 FANCLQ9NW38 375 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 STK32BQ9NY57 414 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 SERTAD1Q9UHV2 236 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 SERPINA10Q9UK55 444 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 TPX2Q9ULW0 747 aaKnown RBP13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 COL15A1P39059 1388 aa13.54□□□□□ -0.24
TSPAN9-201ENST00000011898 NOP2P46087 812 aaKnown RBP13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 ADKP55263 362 aaKnown RBP13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 TXNRD1Q16881 649 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 SLC4A9Q96Q91 983 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 VPS54Q9P1Q0 977 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 CARMIL3Q8ND23 1372 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 MIPOL1Q8TD10 442 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 GEMIN8Q9NWZ8 242 aaKnown RBP13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 LAMB4A4D0S4 1761 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 TLDC2A0PJX2 215 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 PCCAP05165 728 aaPredicted RBP13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 ZNF827Q17R98 1081 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 LONRF2Q1L5Z9 754 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 WWC2Q6AWC2 1192 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 PI16Q6UXB8 463 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 IFNL3Q8IZI9 196 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 LINC00301Q8NCQ3 95 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 NUCKS1Q9H1E3 243 aaKnown RBP13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 PCDHA5Q9Y5H7 936 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 DBN1Q16643 649 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 SLFNL1Q499Z3 407 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 SELENOSQ9BQE4 189 aa13.53□□□□□ -0.24
TSPAN9-201ENST00000011898 CTSWP56202 376 aa13.52□□□□□ -0.24
TSPAN9-201ENST00000011898 GSTO1P78417 241 aa13.52□□□□□ -0.24
TSPAN9-201ENST00000011898 SLC39A14Q15043 492 aa13.52□□□□□ -0.24
TSPAN9-201ENST00000011898 TTC38Q5R3I4 469 aa13.52□□□□□ -0.24
TSPAN9-201ENST00000011898 TRIM68Q6AZZ1 485 aa13.52□□□□□ -0.24
TSPAN9-201ENST00000011898 FLAD1Q8NFF5 587 aa13.52□□□□□ -0.24
TSPAN9-201ENST00000011898 NSRP1Q9H0G5 558 aaKnown RBP13.52□□□□□ -0.24
TSPAN9-201ENST00000011898 GPHNQ9NQX3 736 aaPredicted RBP13.52□□□□□ -0.24
TSPAN9-201ENST00000011898 CTNND2Q9UQB3 1225 aa13.52□□□□□ -0.24
TSPAN9-201ENST00000011898 CLEC11AQ9Y240 323 aa13.52□□□□□ -0.24
TSPAN9-201ENST00000011898 SAMM50Q9Y512 469 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms