RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 FRMPD2Q68DX3 1309 aaPredicted RBP14.14□□□□□ -0.15
SYPL1-201ENST00000011473 CTCFP49711 727 aaPredicted RBP14.14□□□□□ -0.15
SYPL1-201ENST00000011473 CAP1Q01518 475 aa14.14□□□□□ -0.15
SYPL1-201ENST00000011473 PPP4R3BQ5MIZ7 849 aa14.14□□□□□ -0.15
SYPL1-201ENST00000011473 IGDCC4Q8TDY8 1250 aa14.14□□□□□ -0.15
SYPL1-201ENST00000011473 PAGR1Q9BTK6 254 aa14.14□□□□□ -0.15
SYPL1-201ENST00000011473 CFHR5Q9BXR6 569 aa14.14□□□□□ -0.15
SYPL1-201ENST00000011473 ADGRA2Q96PE1 1338 aa14.13□□□□□ -0.15
SYPL1-201ENST00000011473 ERICH2A1L162 156 aa14.13□□□□□ -0.15
SYPL1-201ENST00000011473 SPDYE16A6NNV3 312 aaPredicted RBP14.13□□□□□ -0.15
SYPL1-201ENST00000011473 GOLGA8HP0CJ92 632 aa14.13□□□□□ -0.15
SYPL1-201ENST00000011473 BMP3P12645 472 aa14.13□□□□□ -0.15
SYPL1-201ENST00000011473 CASTP20810 708 aaKnown RBP14.13□□□□□ -0.15
SYPL1-201ENST00000011473 KRT32Q14532 448 aa14.13□□□□□ -0.15
SYPL1-201ENST00000011473 WTAPQ15007 396 aa14.13□□□□□ -0.15
SYPL1-201ENST00000011473 C17orf99Q6UX52 265 aa14.13□□□□□ -0.15
SYPL1-201ENST00000011473 BRCA2P51587 3418 aa14.13□□□□□ -0.15
SYPL1-201ENST00000011473 TMEM232C9JQI7 657 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 EPB41L2O43491 1005 aaKnown RBP14.12□□□□□ -0.15
SYPL1-201ENST00000011473 PDHBP11177 359 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 NT5C2P49902 561 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 COG2Q14746 738 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 SART3Q15020 963 aaKnown RBP14.12□□□□□ -0.15
SYPL1-201ENST00000011473 CCDC96Q2M329 555 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 TTBK2Q6IQ55 1244 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 RAB11FIP4Q86YS3 637 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 ATG4CQ96DT6 458 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 MYL10Q9BUA6 226 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 UPF3BQ9BZI7 483 aaKnown RBP14.12□□□□□ -0.15
SYPL1-201ENST00000011473 LY9Q9HBG7 655 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 SYNPO2Q9UMS6 1093 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 SH2B2O14492 632 aaPredicted RBP14.12□□□□□ -0.15
SYPL1-201ENST00000011473 SLC16A2P36021 539 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 IKQ13123 557 aaPredicted RBP14.12□□□□□ -0.15
SYPL1-201ENST00000011473 DHX32Q7L7V1 743 aaKnown RBP14.12□□□□□ -0.15
SYPL1-201ENST00000011473 ANKS1AQ92625 1134 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 KIFC2Q96AC6 838 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 GMCL1Q96IK5 515 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 ARHGAP39Q9C0H5 1083 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 CPVLQ9H3G5 476 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 GPCPD1Q9NPB8 672 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 MYH4Q9Y623 1939 aa14.12□□□□□ -0.15
SYPL1-201ENST00000011473 BCRP11274 1271 aa14.11□□□□□ -0.15
SYPL1-201ENST00000011473 EXOSC10Q01780 885 aaKnown RBP14.11□□□□□ -0.15
SYPL1-201ENST00000011473 Q3C1V9 767 aa14.11□□□□□ -0.15
SYPL1-201ENST00000011473 CCDC178Q5BJE1 867 aa14.11□□□□□ -0.15
SYPL1-201ENST00000011473 BLOC1S2Q6QNY1 142 aa14.11□□□□□ -0.15
SYPL1-201ENST00000011473 RBPJLQ9UBG7 517 aa14.11□□□□□ -0.15
SYPL1-201ENST00000011473 RXRAP19793 462 aa14.11□□□□□ -0.15
SYPL1-201ENST00000011473 DSG3P32926 999 aa14.11□□□□□ -0.15
SYPL1-201ENST00000011473 SNAP25P60880 206 aa14.11□□□□□ -0.15
SYPL1-201ENST00000011473 SP3Q02447 781 aa14.11□□□□□ -0.15
SYPL1-201ENST00000011473 CD99L2Q8TCZ2 262 aa14.11□□□□□ -0.15
SYPL1-201ENST00000011473 BTBD7Q9P203 1132 aa14.11□□□□□ -0.15
SYPL1-201ENST00000011473 PPP1R9AQ9ULJ8 1098 aa14.11□□□□□ -0.15
SYPL1-201ENST00000011473 CTGFP29279 349 aa14.1□□□□□ -0.15
SYPL1-201ENST00000011473 STAT2P52630 851 aa14.1□□□□□ -0.15
SYPL1-201ENST00000011473 NFXL1Q6ZNB6 911 aa14.1□□□□□ -0.15
SYPL1-201ENST00000011473 SLF1Q9BQI6 1058 aa14.1□□□□□ -0.15
SYPL1-201ENST00000011473 HOXC10Q9NYD6 342 aa14.1□□□□□ -0.15
SYPL1-201ENST00000011473 FKTNO75072 461 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 CNMDO75829 334 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 SNHG28P0DPA3 235 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 RPS6KB1P23443 525 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 STAG2Q8N3U4 1231 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 NUP133Q8WUM0 1156 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 DCAF4Q8WV16 495 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 TMEM87BQ96K49 555 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 VWA5AO00534 786 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 HMGB1P09429 215 aaKnown RBP14.09□□□□□ -0.15
SYPL1-201ENST00000011473 PSMA5P28066 241 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 GCLCP48506 637 aaPredicted RBP14.09□□□□□ -0.15
SYPL1-201ENST00000011473 FGD1P98174 961 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 ZNF543Q08ER8 600 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 TROAPQ12815 778 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 PLS1Q14651 629 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 LBX2Q6XYB7 198 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 Q6ZUG5 572 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 CCDC144CPQ8IYA2 1237 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 LARP6Q9BRS8 491 aaKnown RBP14.09□□□□□ -0.15
SYPL1-201ENST00000011473 UBA5Q9GZZ9 404 aa14.09□□□□□ -0.15
SYPL1-201ENST00000011473 CCDC69A6NI79 296 aa14.08□□□□□ -0.16
SYPL1-201ENST00000011473 SLC4A3P48751 1232 aa14.08□□□□□ -0.16
SYPL1-201ENST00000011473 ERVK-9P63128 1117 aa14.08□□□□□ -0.16
SYPL1-201ENST00000011473 ERVK-24P63145 666 aa14.08□□□□□ -0.16
SYPL1-201ENST00000011473 LACTBP83111 547 aaPredicted RBP14.08□□□□□ -0.16
SYPL1-201ENST00000011473 TMEM132BQ14DG7 1078 aa14.08□□□□□ -0.16
SYPL1-201ENST00000011473 FAM110CQ1W6H9 321 aa14.08□□□□□ -0.16
SYPL1-201ENST00000011473 RUFY3Q7L099 469 aa14.08□□□□□ -0.16
SYPL1-201ENST00000011473 ZNF654Q8IZM8 581 aa14.08□□□□□ -0.16
SYPL1-201ENST00000011473 PRPF38AQ8NAV1 312 aaKnown RBP14.08□□□□□ -0.16
SYPL1-201ENST00000011473 PORCNQ9H237 461 aa14.08□□□□□ -0.16
SYPL1-201ENST00000011473 ZSWIM6Q9HCJ5 1215 aa14.08□□□□□ -0.16
SYPL1-201ENST00000011473 FEM1BQ9UK73 627 aa14.08□□□□□ -0.16
SYPL1-201ENST00000011473 TAL1P17542 331 aaPredicted RBP14.08□□□□□ -0.16
SYPL1-201ENST00000011473 LIFRP42702 1097 aa14.08□□□□□ -0.16
SYPL1-201ENST00000011473 CATIPQ7Z7H3 387 aa14.08□□□□□ -0.16
SYPL1-201ENST00000011473 MICU3Q86XE3 530 aa14.08□□□□□ -0.16
SYPL1-201ENST00000011473 CPXCR1Q8N123 301 aa14.08□□□□□ -0.16
SYPL1-201ENST00000011473 GPRC5AQ8NFJ5 357 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms