RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 PNMA3Q9UL41 463 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 CEP170BQ9Y4F5 1589 aaPredicted RBP11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 FSD2A1L4K1 749 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 TMOD1P28289 359 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 NFIXQ14938 502 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 INF2Q27J81 1249 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 CDC37L1Q7L3B6 337 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 GPKOWQ92917 476 aaPredicted RBP eCLIP11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 ADAMTS13Q76LX8 1427 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 ZNF202O95125 648 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 OR52Z1P0C646 297 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 SPOUT1Q5T280 376 aaKnown RBP11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 CCDC186Q7Z3E2 898 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 GPR101Q96P66 508 aaPredicted RBP11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 ISCA1Q9BUE6 129 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 IFNKQ9P0W0 207 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 IKBKGQ9Y6K9 419 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 RIMS1Q86UR5 1692 aaKnown RBP11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 SPATA31A5Q5VU36 1347 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 SPATA31A7Q8IWB4 1347 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 FRMPD1Q5SYB0 1578 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 PIK3C2BO00750 1634 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 CRKP46108 304 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 STAT2P52630 851 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 TRIM14Q14142 442 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 PI16Q6UXB8 463 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 FAM160B2Q86V87 743 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 PTPRUQ92729 1446 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 NCOA3Q9Y6Q9 1424 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 TMEM110-MUSTN1A8MSY1 372 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 SP8Q8IXZ3 490 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 LSG1Q9H089 658 aaKnown RBP11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 AP5M1Q9H0R1 490 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 CD209Q9NNX6 404 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 PCDHB13Q9Y5F0 798 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 ASNSP08243 561 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 XKR9Q5GH70 373 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 CCDC50Q8IVM0 306 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 CLSTN2Q9H4D0 955 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 RABGAP1Q9Y3P9 1069 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 SYNRGQ9UMZ2 1314 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 POSTNQ15063 836 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 FAM102BQ5T8I3 360 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 FAM173BQ6P4H8 233 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 MIGA2Q7L4E1 593 aa11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 BBXQ8WY36 941 aaPredicted RBP11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.54□□□□□ -0.56
NIPAL3-201ENST00000003912 NR1I2O75469 434 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 AOC3Q16853 763 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 PRKAB2O43741 272 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 SASH1O94885 1247 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 TUBB4AP04350 444 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 P4HA1P13674 534 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 CELF1Q92879 486 aaKnown RBP11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 RNF26Q9BY78 433 aaPredicted RBP11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 PIH1D3Q9NQM4 214 aaKnown RBP11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 TNFAIP3P21580 790 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 PDIA3P30101 505 aaKnown RBP11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 RAD51AP2Q09MP3 1159 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 KCTD1Q719H9 257 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 ADPGKQ9BRR6 497 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 PUS7LQ9H0K6 701 aaKnown RBP11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 MAPK8IP1Q9UQF2 711 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 ATP6V0A2Q9Y487 856 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 ZEB2O60315 1214 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 PLCB3Q01970 1234 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 UTP14CQ5TAP6 766 aaKnown RBP11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 TMEM179Q6ZVK1 233 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 GPBP1Q86WP2 473 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 APOBEC3FQ8IUX4 373 aaKnown RBP11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 CDHR1Q96JP9 859 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 TBC1D7Q9P0N9 293 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 SOS2Q07890 1332 aaPredicted RBP11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 PNPLA6Q8IY17 1366 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 TECP42680 631 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 SYDE2Q5VT97 1194 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 TPCN1Q9ULQ1 816 aa11.53□□□□□ -0.56
NIPAL3-201ENST00000003912 IQCA1LA6NCM1 817 aa11.52□□□□□ -0.56
NIPAL3-201ENST00000003912 PALM3A6NDB9 673 aaPredicted RBP11.52□□□□□ -0.56
NIPAL3-201ENST00000003912 PRPF6O94906 941 aaKnown RBP11.52□□□□□ -0.56
NIPAL3-201ENST00000003912 TRIM28Q13263 835 aaKnown RBP11.52□□□□□ -0.56
NIPAL3-201ENST00000003912 TBC1D10BQ4KMP7 808 aaPredicted RBP11.52□□□□□ -0.56
NIPAL3-201ENST00000003912 LIN9Q5TKA1 542 aa11.52□□□□□ -0.56
NIPAL3-201ENST00000003912 OSBP2Q969R2 916 aa11.52□□□□□ -0.56
NIPAL3-201ENST00000003912 NEXMIFQ5QGS0 1516 aa11.52□□□□□ -0.56
NIPAL3-201ENST00000003912 PSDA5PKW4 1024 aaPredicted RBP11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 KRT19P08727 400 aa11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 YWHAEP62258 255 aaKnown RBP11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 DIP2AQ14689 1571 aa11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 BMS1Q14692 1282 aaKnown RBP11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 GSTA5Q7RTV2 222 aa11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 MARCH10Q8NA82 808 aaPredicted RBP11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 ZNF277Q9NRM2 450 aaPredicted RBP11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 NRKQ7Z2Y5 1582 aa11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 ATP2A1O14983 1001 aa11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 GOLGA5Q8TBA6 731 aa11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 JPH2Q9BR39 696 aaPredicted RBP11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 ZNF341Q9BYN7 854 aa11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 TSGA10Q9BZW7 698 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms