RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Ifit1Q64282 463 aa17.7■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Znf365Q8BG89 408 aa17.7■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Ccdc28aQ8CEI3 192 aa17.7■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Enox2Q8R0Z2 598 aa17.7■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Ddx41Q91VN6 622 aaKnown RBP17.7■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 PdclQ9DBX2 301 aa17.7■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Cetn3O35648 167 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Fdx1P46656 188 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Rimbp2Q80U40 1072 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Clca2Q8BG22 942 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Gtpbp10Q8K013 366 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 AticQ9CWJ9 592 aaKnown RBP17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Cyp2j7A0A140T8U1 504 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Prss51A0A286YDY8 319 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Cct6aP80317 531 aaKnown RBP17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 MaeaQ4VC33 396 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Hirip3Q8BLH7 601 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Cep83Q9D5R3 692 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Zscan18E9PUD6 809 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Vars2Q3U2A8 1060 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Zbtb16Q3UQ17 673 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 DbnlQ62418 436 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Asap2Q7SIG6 958 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Spats2Q8K1N4 545 aaKnown RBP17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Pde6cQ91ZQ1 861 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Filip1Q9CS72 1211 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Myoz2Q9JJW5 264 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Zfp781Q0P5U5 243 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Sh2d4bA6X942 431 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Sema6bO54951 886 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Rps6ka1P18653 724 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Nucks1Q80XU3 234 aaKnown RBP17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 RbsnQ80Y56 783 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Vps52Q8C754 723 aaKnown RBP17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 4933428M09RikQ9D3X3 192 aa17.69■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Kcnh4A2A5F7 1018 aa17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Gm13023A2A8N2 498 aa17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Mpp4Q6P7F1 635 aa17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Stk38lQ7TSE6 464 aa17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Bmp2kQ91Z96 1138 aa17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Sar1bQ9CQC9 198 aa17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Ube3bQ9ES34 1070 aa17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Cdc42bpgQ80UW5 1551 aa17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Lamc1P02468 1607 aaKnown RBP17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Sec63Q8VHE0 760 aaKnown RBP17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Lzts2Q91YU6 671 aa17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Gm32742A0A1B0GT42 1604 aa17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Becn2P0DM65 447 aa17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Ercc5P35689 1170 aa17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Kdm8Q9CXT6 414 aa17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 CsadQ9DBE0 493 aa17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Il7P10168 154 aa17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Krt222Q8CCX5 294 aa17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Prdm2A2A7B5 1709 aaKnown RBP17.68■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Sos2Q02384 1333 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Dynll1P63168 89 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Slc38a10Q5I012 1090 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Bicdl2Q8CHW5 507 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Taf5lQ91WQ5 589 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Flot1O08917 428 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Pde11aP0C1Q2 933 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Zfyve27Q3TXX3 415 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 GancQ8BVW0 898 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Hgh1Q8C3I8 393 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Enc1O35709 589 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Slc51bQ80WK2 128 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 RragaQ80X95 313 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Spata2Q8K004 515 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Spc24Q9D083 201 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Kif23E9Q5G3 953 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Ncf2O70145 525 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 AsnsQ61024 561 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Fgd5Q80UZ0 1219 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Rassf10Q8BL43 508 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Acot11Q8VHQ9 594 aa17.67■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Mageb2A2AHM0 380 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Ccdc13D3YV10 709 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Gm10110D3Z5M2 615 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Magea6O89010 325 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 PrphP15331 475 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Armc2Q3URY6 854 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Tbc1d31Q6NXY1 996 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Magea3Q6T340 320 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Lrrd1Q8C0R9 853 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Pym1Q8CHP5 203 aaKnown RBP17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Nod2Q8K3Z0 1020 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Bfsp1A2AMT1 669 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Dmrtc1Q9D9R7 182 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Rims2Q9EQZ7 1530 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 GabrdP22933 449 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Herc4Q6PAV2 1057 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 RereQ80TZ9 1558 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Ccdc7Q9D541 371 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 EhhadhQ9DBM2 718 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Slc10a4Q3UEZ8 437 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Znf830Q8R1N0 363 aaKnown RBP17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Usp21Q9QZL6 566 aa17.66■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Pfkfb1P70266 471 aa17.65■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Serpinb1cQ5SV42 375 aa17.65■□□□□ 0.42
Pcdh1-203ENSMUST00000160721 Ppp2r2cQ8BG02 447 aa17.65■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms