RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Cib2Q9Z309 187 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Cdc42bpgQ80UW5 1551 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 DgkiD3YWQ0 1071 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Parp1P11103 1013 aaKnown RBP13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Tnnc1P19123 161 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Ctnna1P26231 906 aaKnown RBP13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 FerP70451 823 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Klra9Q2TJJ8 266 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Lmbrd2Q8C561 694 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Exd1Q8CDF7 570 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Ccdc28bQ8CEG5 200 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Arhgef6Q8K4I3 771 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Znf445Q8R2V3 986 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Rnf112Q96DY5 654 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Cfap57Q9D180 1249 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Klra10Q9R1G6 266 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Atp6v0a1Q9Z1G4 839 aaKnown RBP13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Nphp3Q7TNH6 1325 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 RereQ80TZ9 1558 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 FancaQ9JL70 1439 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Gm28360A0A087WR25 190 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Lzts1P60853 599 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 TdrkhQ80VL1 560 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 HscbQ8K3A0 234 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Eif3hQ91WK2 352 aaKnown RBP13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Haus8Q99L00 373 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 AdarQ99MU3 1178 aaKnown RBP13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Efcab2Q9CQ46 164 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Rufy3Q9D394 469 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Tmco5aQ9D9D5 303 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Xab2Q9DCD2 855 aaKnown RBP13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 AmfrQ9R049 643 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Plcb1Q9Z1B3 1216 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 CenpaO35216 134 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Dapk3O54784 448 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Me1P06801 572 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Tm6sf1P58749 370 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Spty2d1Q68FG3 682 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 NostrinQ6WKZ7 506 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Kcns3Q8BQZ8 491 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Abhd8Q8R0P8 439 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Dnajc28Q8VCE1 385 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Taf11Q99JX1 211 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 IydQ9DCX8 285 aa13.22□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Ttc30a2A2AKQ8 664 aa13.21□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Zbtb21E9Q444 1094 aa13.21□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Ighmbp2P40694 993 aa13.21□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Fbxo41Q6NS60 873 aa13.21□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Sec24bQ80ZX0 1251 aa13.21□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Ipo5Q8BKC5 1097 aaKnown RBP13.21□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Ttc30a1Q99J38 664 aa13.21□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Ttc30bQ9CY00 664 aa13.21□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Mrpl44Q9CY73 333 aaKnown RBP13.21□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Mipol1Q9D9F8 279 aa13.21□□□□□ -0.29
Bdnf-205ENSMUST00000111045 LyarQ08288 388 aaKnown RBP13.21□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Washc4Q3UMB9 1173 aa13.21□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Sfr1Q8BP27 319 aa13.21□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Ndc80Q9D0F1 642 aaKnown RBP13.21□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Il1rapl2Q9ERS6 686 aa13.21□□□□□ -0.29
Bdnf-205ENSMUST00000111045 SmapQ9R0P4 181 aaKnown RBP13.21□□□□□ -0.29
Bdnf-205ENSMUST00000111045 Tecpr2Q3UH45 1423 aa13.21□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Setdb1O88974 1307 aa13.21□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Iqsec2Q5DU25 1478 aa13.21□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Ccdc144bE9PVZ3 520 aa13.21□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Sptlc2P97363 560 aaKnown RBP13.21□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Hddc2Q3SXD3 199 aa13.21□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Ifit1Q64282 463 aa13.21□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Fchsd1Q6PFY1 688 aa13.21□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Znrd1-asQ8R0E5 213 aa13.21□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Satb2Q8VI24 733 aa13.21□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Rab27aQ9ERI2 221 aa13.21□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Atp6v1g2Q9WTT4 118 aa13.21□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Abca8aQ8K442 1620 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Tada2bD3Z4Z0 420 aaKnown RBP13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Snx25Q3ZT31 840 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Orc2Q60862 576 aaKnown RBP13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Krt12Q64291 487 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 MarsQ68FL6 902 aaKnown RBP13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 AidaQ8C4Q6 305 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Tdrd7Q8K1H1 1086 aaKnown RBP13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Rufy2Q8R4C2 606 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Uso1Q9Z1Z0 959 aaKnown RBP13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Fndc1E9Q043 1732 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Akap12Q9WTQ5 1684 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Lins1Q3U1D0 764 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Trim17Q7TPM3 477 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Dnajc6Q80TZ3 938 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Eif4bQ8BGD9 611 aaKnown RBP13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Klhl7Q8BUL5 586 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Cdk5rap3Q99LM2 503 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 GsdmeQ9Z2D3 512 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 MaddQ80U28 1577 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Topbp1Q6ZQF0 1515 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Gm4985A2ALC6 410 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Myl1P05977 188 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Arhgap17Q3UIA2 846 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Slc38a10Q5I012 1090 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Adck2Q6NSR3 617 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Fnbp1Q80TY0 616 aa13.2□□□□□ -0.3
Bdnf-205ENSMUST00000111045 FtoQ8BGW1 502 aa13.2□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms