RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Cd209bQ8CJ91 325 aa11.74□□□□□ -0.53
Vcan-202ENSMUST00000109544 Cops6O88545 324 aa11.74□□□□□ -0.53
Vcan-202ENSMUST00000109544 GsnP13020 780 aa11.74□□□□□ -0.53
Vcan-202ENSMUST00000109544 Gna14P30677 355 aa11.74□□□□□ -0.53
Vcan-202ENSMUST00000109544 NeblQ0II04 452 aa11.74□□□□□ -0.53
Vcan-202ENSMUST00000109544 Sh3gl3Q62421 347 aa11.74□□□□□ -0.53
Vcan-202ENSMUST00000109544 Kctd6Q8BNL5 237 aa11.74□□□□□ -0.53
Vcan-202ENSMUST00000109544 Arhgap29Q8CGF1 1266 aa11.74□□□□□ -0.53
Vcan-202ENSMUST00000109544 BlvraQ9CY64 295 aa11.74□□□□□ -0.53
Vcan-202ENSMUST00000109544 Itga6Q61739 1091 aa11.74□□□□□ -0.53
Vcan-202ENSMUST00000109544 Klc4Q9DBS5 619 aa11.74□□□□□ -0.53
Vcan-202ENSMUST00000109544 NxnP97346 435 aa11.74□□□□□ -0.53
Vcan-202ENSMUST00000109544 Gm136Q3V037 328 aa11.74□□□□□ -0.53
Vcan-202ENSMUST00000109544 Kif22Q3V300 660 aa11.74□□□□□ -0.53
Vcan-202ENSMUST00000109544 Lmbrd2Q8C561 694 aa11.74□□□□□ -0.53
Vcan-202ENSMUST00000109544 Cbwd1Q8VEH6 393 aa11.74□□□□□ -0.53
Vcan-202ENSMUST00000109544 Foxp1P58462 705 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Nsun2Q1HFZ0 757 aaKnown RBP11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Ccdc84Q4VA36 332 aaKnown RBP11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Erich2E9Q1A6 463 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Khdrbs1Q60749 443 aaKnown RBP11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Map3k7Q62073 579 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Nuak1Q641K5 658 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Tmtc4Q8BG19 741 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Gucy1b3O54865 620 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Gpc4P51655 557 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Hace1Q3U0D9 909 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Pls1Q3V0K9 630 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Prdm1Q60636 856 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Klhl29Q80T74 875 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Sgsm2Q80U12 1005 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Ginm1Q91WR6 327 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 1700013H16RikQ9DAC5 291 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Gm15262A0A140LIQ5 728 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Slc3a2P10852 526 aaKnown RBP11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Casp1P29452 402 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Stx1bP61264 288 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Ppp1r1bQ60829 194 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Q6PD19 689 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Wdr17E9Q271 1322 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Tex14Q7M6U3 1450 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Trim5E9PV98 497 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Enc1O35709 589 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Trappc10Q3TLI0 1259 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Scyl2Q8CFE4 930 aa11.73□□□□□ -0.53
Vcan-202ENSMUST00000109544 Camsap1A2AHC3 1581 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Cep85lA0A1W2P884 806 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Ccdc78D3Z5T1 437 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Xrcc5P27641 732 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Pfdn4Q3UWL8 134 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Atp1a3Q6PIC6 1013 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Arhgap18Q8K0Q5 663 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Saal1Q9D2C2 474 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 CalcaP70160 136 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 InhbaQ04998 424 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Nr1d1Q3UV55 615 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Tmem132eQ6IEE6 982 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Jade1Q6ZPI0 834 aaKnown RBP11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Klhl38Q8BSF5 581 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Arhgap42B2RQE8 841 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Sestd1Q80UK0 696 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Mfap3Q922T2 349 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Neo1P97798 1493 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Bola2Q8BGS2 86 aa11.72□□□□□ -0.53
Vcan-202ENSMUST00000109544 Surf1P09925 306 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Gna15P30678 374 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Usp8Q80U87 1080 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 ThemisQ8BGW0 636 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Desi2Q9D291 194 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Diaph3Q9Z207 1171 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Crocc2F6XLV1 1638 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Prl7a2O54831 253 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Igflr1Q3U4N7 345 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Q4VA45 678 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Tor4aQ8BH02 426 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Daam1Q8BPM0 1077 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 1700020D05RikQ99PB1 294 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Polr3cQ9D483 533 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Copb1Q9JIF7 953 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 DgkiD3YWQ0 1071 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Fen1P39749 378 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Ncoa7Q6DFV7 943 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Nod2Q8K3Z0 1020 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Dbn1Q9QXS6 706 aa11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Wdr46Q9Z0H1 622 aaKnown RBP11.71□□□□□ -0.53
Vcan-202ENSMUST00000109544 Atg4a-psA0A0G2JFS9 396 aa11.71□□□□□ -0.54
Vcan-202ENSMUST00000109544 Cfap70D3YVL2 1141 aa11.71□□□□□ -0.54
Vcan-202ENSMUST00000109544 Bin2D3Z6Q9 489 aa11.71□□□□□ -0.54
Vcan-202ENSMUST00000109544 Gm7995L7N2E4 160 aa11.71□□□□□ -0.54
Vcan-202ENSMUST00000109544 Nr1i2O54915 431 aa11.71□□□□□ -0.54
Vcan-202ENSMUST00000109544 XlrP05531 208 aa11.71□□□□□ -0.54
Vcan-202ENSMUST00000109544 Kpna2P52293 529 aaKnown RBP11.71□□□□□ -0.54
Vcan-202ENSMUST00000109544 Nlrp1aQ2LKU9 1182 aa11.71□□□□□ -0.54
Vcan-202ENSMUST00000109544 NntQ61941 1086 aaKnown RBP11.71□□□□□ -0.54
Vcan-202ENSMUST00000109544 PicalmQ7M6Y3 660 aaKnown RBP11.71□□□□□ -0.54
Vcan-202ENSMUST00000109544 Cracr2bQ80ZJ8 394 aa11.71□□□□□ -0.54
Vcan-202ENSMUST00000109544 IarsQ8BU30 1262 aa11.71□□□□□ -0.54
Vcan-202ENSMUST00000109544 Atg4aQ8C9S8 396 aa11.71□□□□□ -0.54
Vcan-202ENSMUST00000109544 Kat14Q8CID0 779 aa11.71□□□□□ -0.54
Vcan-202ENSMUST00000109544 Ppp4r1Q8K2V1 951 aa11.71□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms