RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Jakmip3Q5DTN8 844 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Plxnb2B2RXS4 1842 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 OatP29758 439 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Nlgn2Q69ZK9 836 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Ssh1Q76I79 1042 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Brd2Q7JJ13 798 aaKnown RBP11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Lca5Q80ST9 704 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 RubcnQ80U62 956 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 SltmQ8CH25 1031 aaKnown RBP11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Cd2apQ9JLQ0 637 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Atrnl1Q6A051 1378 aa11.42□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 OsbpQ3B7Z2 805 aa11.41□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Lzts2Q91YU6 671 aa11.41□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Igsf9bE9PZ19 1328 aa11.41□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Pfkfb3A7UAK5 555 aa11.41□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 ThbdP15306 577 aa11.41□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 LdhbP16125 334 aaKnown RBP11.41□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Adgrg6Q6F3F9 1165 aa11.41□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Ccdc148Q6P5U8 527 aa11.41□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Kctd3Q8BFX3 815 aa11.41□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Tmem191cQ9JJB1 302 aa11.41□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Tob2Q9JM55 345 aa11.41□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Cry2Q9R194 592 aa11.41□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Pcmtd1P59913 357 aa11.41□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Ddx55Q6ZPL9 600 aaKnown RBP11.41□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Naa30Q8CES0 364 aa11.41□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Cyp3a25O09158 503 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 PtpraP18052 829 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Mars2Q499X9 586 aaKnown RBP11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Rhpn1Q61085 643 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Grm4Q68EF4 912 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Gprasp2Q8BUY8 826 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Mknk2Q8CDB0 459 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Stk38Q91VJ4 465 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Arpp21Q9DCB4 807 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Gm44503E9PYU5 387 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Cxcl9P18340 126 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Atp13a3Q5XF89 1219 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Garem2Q6PAJ3 880 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Onecut3Q8K557 490 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Pspc1Q8R326 523 aaKnown RBP11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Dnaaf4Q8R368 420 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Ttc8Q8VD72 515 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 HlcsQ920N2 722 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Wdr64Q9D565 1086 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Eif4enif1Q9EST3 983 aaKnown RBP11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Frmpd4A2AFR3 1320 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Usp34Q6ZQ93 3582 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Nme9A0A1L1SUL6 329 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Pabpc1lA2A5N3 607 aaKnown RBP11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Parp2O88554 559 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Fam89aQ14BJ1 175 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Bri3bpQ8BXV2 253 aa11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Zhx2Q8C0C0 836 aaKnown RBP11.4□□□□□ -0.58
Ccdc38-201ENSMUST00000092215 Armc3A2AU72 881 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Traf5P70191 558 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Igf2bp2Q5SF07 592 aaKnown RBP11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Senp5Q6NXL6 749 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Srek1Q8BZX4 494 aaKnown RBP11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Oxnad1Q8VE38 311 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Srgap1Q91Z69 1062 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Krt85Q9Z2T6 507 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Pitpnm2Q6ZPQ6 1335 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Sall1Q9ER74 1322 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Lnx1O70263 728 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 HunkO88866 714 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Gjb4Q02738 266 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Cyp4x1Q6A152 507 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Fbxo11Q7TPD1 930 aaKnown RBP11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 RadxQ8C779 850 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Nat10Q8K224 1024 aaKnown RBP11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Rcan1Q9JHG6 198 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Wdr19Q3UGF1 1341 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Mms22lB1AUR6 1238 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Esyt1Q3U7R1 1092 aaKnown RBP11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Rasa3Q60790 834 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Plcg2Q8CIH5 1265 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Bicd2Q921C5 820 aa11.39□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 XdhQ00519 1335 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Gdf10P97737 476 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Stxbp3Q60770 592 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Hoxa13Q62424 386 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Dcaf15Q6PFH3 600 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Lrrc24Q8BHA1 521 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Armc6Q8BNU0 468 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Il31raQ8K5B1 716 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Tdrd1Q99MV1 1172 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Inpp4aQ9EPW0 939 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Usp14Q9JMA1 493 aaKnown RBP11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Psmd10Q9Z2X2 231 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 SrcapA0A087WQ44 3271 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Syne4Q8CII8 388 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Gmcl1Q920G9 524 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 A0A0U1RNP2 1173 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Has3O08650 554 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 MarcksP26645 309 aaKnown RBP11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Fbln1Q08879 705 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Plcd3Q8K2J0 785 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Sapcd2Q9D818 391 aa11.38□□□□□ -0.59
Ccdc38-201ENSMUST00000092215 Clic4Q9QYB1 253 aa11.38□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms