RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Fbxo41Q6NS60 873 aa17.17■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Ckap2lQ7TS74 745 aa17.17■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Dzip1Q8BMD2 852 aa17.17■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Mylk2Q8VCR8 613 aa17.17■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Spats2lQ91WJ7 558 aaKnown RBP17.17■□□□□ 0.34
Ubr3-201ENSMUST00000055758 1700020D05RikQ99PB1 294 aa17.17■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Patl1Q3TC46 770 aaKnown RBP17.17■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Ifit1Q64282 463 aa17.17■□□□□ 0.34
Ubr3-201ENSMUST00000055758 KynuQ9CXF0 464 aa17.17■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Azi2Q9QYP6 405 aa17.17■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Cep104Q80V31 926 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Bola2Q8BGS2 86 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Stk10O55098 966 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Ccdc50Q810U5 305 aaKnown RBP17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Ppp1r12bQ8BG95 976 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Zscan22Q8BGS5 496 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Tnnc2P20801 160 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 IvlP48997 467 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Arhgef9Q3UTH8 516 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Serpinb6Q60854 378 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Dnajc17Q91WT4 303 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Cdcp1Q5U462 833 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 HdlbpQ8VDJ3 1268 aaKnown RBP17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 LpxnQ99N69 386 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Trim12cD3Z3L3 497 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 CaluO35887 315 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Frmpd2A0A140LI67 1392 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Sap30bpQ02614 308 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Elf1Q60775 612 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Card14Q99KF0 999 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Slc13a1Q9JHI4 594 aa17.16■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Tmtc1Q3UV71 942 aa17.15■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Slc30a9Q5IRJ6 567 aa17.15■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Cd2bp2Q9CWK3 342 aaKnown RBP17.15■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Fam135bQ9DAI6 1403 aa17.15■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Ccdc189Q6NZQ0 333 aa17.15■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Arhgap4B1AUY3 965 aa17.15■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Dzip3Q7TPV2 1204 aa17.15■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Prune1Q8BIW1 454 aa17.15■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Cabp7Q91ZM8 215 aa17.15■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Micall2Q3TN34 1009 aa17.15■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Satb2Q8VI24 733 aa17.15■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Pcdhb22Q91XZ8 794 aa17.15■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Abcb6Q9DC29 842 aa17.15■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Gas2l2Q5SSG4 860 aa17.15■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Kif1bpQ6ZPU9 617 aa17.15■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Cep85lA0A1W2P884 806 aa17.14■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Wdr36Q3TAQ9 899 aaKnown RBP17.14■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Ccdc68Q8BVC4 333 aa17.14■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Saal1Q9D2C2 474 aa17.14■□□□□ 0.34
Ubr3-201ENSMUST00000055758 Gm4297D3YWB7 211 aa17.14■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Rad17Q6NXW6 688 aa17.14■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Rps6ka5Q8C050 863 aa17.14■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Mybl2P48972 704 aa17.14■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Rbm42Q91V81 474 aaKnown RBP17.14■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Zmym3Q9JLM4 1370 aa17.14■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Atad2bE9Q166 1460 aaKnown RBP17.14■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Ccdc182Q9D9C6 152 aa17.14■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Cfap70D3YVL2 1141 aa17.14■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Atf2P16951 487 aaKnown RBP17.14■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Ccdc125Q5U465 500 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Gins4Q99LZ3 223 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Pfkfb1P70266 471 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Klhl29Q80T74 875 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Mtrf1lQ8BJU9 373 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Kcnk13Q8R1P5 405 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Dhx30Q99PU8 1217 aaKnown RBP17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 A2mQ6GQT1 1474 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 GssP51855 474 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Aldh1l2Q8K009 923 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Kcnk16G5E845 292 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Nhej1Q3KNJ2 295 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Rlbp1Q9Z275 317 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Oxr1Q4KMM3 866 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Ccdc85bQ6PDY0 202 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Serpinb12Q9D7P9 423 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 MefvQ9JJ26 767 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Rprd2Q6NXI6 1469 aaKnown RBP17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Fbxo9Q8BK06 437 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Phldb3E9QAF4 648 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Flot2Q60634 428 aaKnown RBP17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Map3k7Q62073 579 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Zc3h6Q8BYK8 1177 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Dhx58Q99J87 678 aa17.13■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Impdh2P24547 514 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Arhgap44Q5SSM3 814 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 4932411N23RikQ8C0S0 470 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Spdl1Q923A2 608 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Nxf1Q99JX7 618 aaKnown RBP17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 NeblQ0II04 452 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Gm10488Q4KL05 212 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Gm14819Q62478 212 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 TxlngQ8BHN1 524 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Deaf1Q9Z1T5 566 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Mroh2bQ7M6Y6 1581 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Kif21aQ9QXL2 1672 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Ankrd13cQ3UX43 541 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Armcx3Q8BHS6 379 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Nsd3Q6P2L6 1439 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Tcp1P11983 556 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms