RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Arrdc4A0A0B4J1F4 415 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Gm45015A0A140LII9 184 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Gm18336A0A140LIU8 765 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Pfkfb3A7UAK5 555 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Zbtb21E9Q444 1094 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 FosbP13346 338 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 LdhbP16125 334 aaKnown RBP10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Sp4Q62445 782 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Bri3bpQ8BXV2 253 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 RadxQ8C779 850 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Pspc1Q8R326 523 aaKnown RBP10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Vta1Q9CR26 309 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Tob2Q9JM55 345 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Pdcd6ipQ9WU78 869 aaKnown RBP10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Homer1Q9Z2Y3 366 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Plcg1Q62077 1302 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Pus7B7ZNL8 666 aaKnown RBP10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 FlgP11088 336 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Tph1P17532 447 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Cbx2P30658 519 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 LyarQ08288 388 aaKnown RBP10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Mre11Q61216 706 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Trnp1Q80ZI1 223 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Armc6Q8BNU0 468 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Cog5Q8C0L8 829 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Tm4sf4Q91XD3 202 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Srgap1Q91Z69 1062 aa10.24□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 HunkO88866 714 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Atoh1P48985 351 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Zdhhc9P59268 364 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Cpa2Q504N0 417 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Atp13a3Q5XF89 1219 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Slc27a1Q60714 646 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Rhpn1Q61085 643 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 BC048507Q80ZS7 89 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Ano1Q8BHY3 960 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Fbxo28Q8BIG4 368 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Zfp113Q8C689 439 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Cdan1Q8CC12 1239 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 SltmQ8CH25 1031 aaKnown RBP10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 NaspQ99MD9 773 aaKnown RBP10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Fsip1Q9D3V5 435 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Psmd10Q9Z2X2 231 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Magea8O89012 320 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Irf5P56477 497 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 GabpaQ00422 454 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 OsbpQ3B7Z2 805 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Pls1Q3V0K9 630 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Arhgef2Q60875 985 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Rgl2Q61193 778 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Gja3Q64448 417 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 PigsQ6PD26 555 aaKnown RBP10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Ccdc82Q6PG04 518 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Pxylp1Q8BHA9 480 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 SdsQ8VBT2 327 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 BaatQ91X34 420 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 PtmsQ9D0J8 101 aaKnown RBP10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Igsf9bE9PZ19 1328 aa10.23□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Ccdc88cQ6VGS5 2009 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Armc3A2AU72 881 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Skint3A7TZF0 458 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Flot1O08917 428 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Cyp3a25O09158 503 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Fam83hQ148V8 1209 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Rapgefl1Q68EF8 662 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Dync1li2Q6PDL0 492 aaKnown RBP10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Gprasp2Q8BUY8 826 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Gpcpd1Q8C0L9 675 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 MslnlQ8C160 685 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Fez1Q8K0X8 392 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Usp33Q8R5K2 909 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Oxnad1Q8VE38 311 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 4921524L21RikQ9D5T2 438 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Sapcd2Q9D818 391 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Cd2apQ9JLQ0 637 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 MthfslL7N466 203 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Dnm1P39053 867 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Rnf216P58283 853 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Gdf10P97737 476 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Tfcp2l1Q3UNW5 479 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Leo1Q5XJE5 667 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Ptger2Q62053 362 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Morc2bQ8C5W4 1022 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Depdc1aQ8CIG0 804 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Tdrd3Q91W18 743 aaKnown RBP10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Tjp3Q9QXY1 905 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Azi2Q9QYP6 405 aa10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 PhipQ8VDD9 1821 aaKnown RBP10.22□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Tanc1Q0VGY8 1856 aa10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Pabpc1lA2A5N3 607 aaKnown RBP10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Dnaaf5B9EJR8 853 aa10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Ppp1r9aH3BJD6 1292 aa10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Il13ra2O88786 383 aa10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Lamp1P11438 406 aaKnown RBP10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Kcna1P16388 495 aa10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 SobpQ0P5V2 864 aa10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Ccdc84Q4VA36 332 aaKnown RBP10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 PRAG1Q571I4 1179 aa10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Syne4Q8CII8 388 aa10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Kcnj14Q8JZN3 434 aa10.21□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms