RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Col23a1Q8K4G2 532 aa9.07□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 HyiQ8R1F5 277 aa9.07□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Mtfr1lQ9CWE0 289 aa9.07□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 TbcbQ9D1E6 244 aa9.07□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Pet2A2AHY8 747 aa9.07□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 CebpzP53569 1052 aaKnown RBP9.07□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Slc10a5Q5PT54 434 aa9.07□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Lamc2Q61092 1191 aa9.07□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Atp2b4Q6Q477 1205 aa9.07□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Tekt3Q6X6Z7 490 aa9.07□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Skor1Q8BX46 964 aa9.07□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Dnajc19Q9CQV7 116 aa9.07□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Tubb4aQ9D6F9 444 aa9.07□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Pik3ap1Q9EQ32 811 aa9.07□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 SmapQ9R0P4 181 aaKnown RBP9.07□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Usp31E9Q6Y8 1344 aa9.07□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Zscan29E9Q5B4 869 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 LdhaP06151 332 aaKnown RBP9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 MarcksP26645 309 aaKnown RBP9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Pola2P33611 600 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Eef2P58252 858 aaKnown RBP9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Fam178bQ24JP3 464 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Ankk1Q8BZ25 745 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Rab3il1Q8VDV3 383 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Mss51Q9D5Z5 446 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Cbx6Q9DBY5 414 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Znf287Q9EQB9 759 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Tbc1d2B1AVH7 922 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Tmem132bF7BAB2 1078 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Api5O35841 504 aaKnown RBP9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Usp53P15975 1069 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Eya3P97480 510 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Rhpn1Q61085 643 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Abcf1Q6P542 837 aaKnown RBP9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Cep120Q7TSG1 988 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Kctd3Q8BFX3 815 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 SpidrQ8BGX7 933 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Hnrnpul1Q8VDM6 859 aaKnown RBP9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Ppp2r5dQ91V89 594 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Q91WD4 421 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Dhx30Q99PU8 1217 aaKnown RBP9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Glrx3Q9CQM9 337 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 ArcQ9WV31 396 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 4932429P05RikA2ADI4 785 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Alppl2P24823 529 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 SarsP26638 512 aaKnown RBP9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Trim43cP86449 446 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Gxylt1Q3UHH8 404 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Armc2Q3URY6 854 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Nat10Q8K224 1024 aaKnown RBP9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Slc51aQ8R000 340 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Taf6lQ8R2K4 616 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Eps8l1Q8R5F8 716 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Cnpy2Q9QXT0 182 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Fxr2Q9WVR4 673 aaKnown RBP9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Atp12aQ9Z1W8 1035 aa9.06□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Lamb2Q61292 1799 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Cyp26c1B2RXA7 518 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Ccdc121E9Q6D3 323 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 GpiP06745 558 aaKnown RBP9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Il7P10168 154 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Dnajc2P54103 621 aaKnown RBP9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Clca4aQ6Q473 924 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 GypcQ78HU7 95 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Aggf1Q7TN31 711 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Triml1Q8BVP1 470 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Rec8Q8C5S7 591 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Tc2nQ91XT6 489 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Gm5737A0A140LI11 423 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Nedd1P33215 660 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Gdf10P97737 476 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Polr3gQ6NXY9 223 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Drd5Q8BLD9 478 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Setdb2Q8C267 713 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Vps33aQ9D2N9 598 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Clip2Q9Z0H8 1047 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Gdf11Q9Z1W4 405 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Scgb2b18A0A087WPA9 112 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Magea10A2AMW4 325 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 TbcaP48428 108 aaKnown RBP9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Olfr121Q5CZY0 321 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Tnni3kQ5GIG6 834 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Vgll2Q8BGW8 322 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Fermt2Q8CIB5 680 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Onecut3Q8K557 490 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Brms1Q99N20 246 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 LpxnQ99N69 386 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Magi2Q9WVQ1 1275 aa9.05□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Nr5a1P33242 462 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 VrtnQ3SYK4 740 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Thrap3Q569Z6 951 aaKnown RBP9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Prpf4bQ61136 1007 aaKnown RBP9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Glg1Q61543 1175 aaKnown RBP9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Ift122Q6NWV3 1182 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Gpcpd1Q8C0L9 675 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 MslnlQ8C160 685 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Havcr2Q8VIM0 281 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Scn3aA2ASI5 1947 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 C87499Q3UX49 493 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Brip1Q5SXJ3 1174 aa9.04□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms