RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Ca8P28651 291 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Snap25P60879 206 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Capza3P70190 299 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Dzip1lQ499E4 774 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Mpp4Q6P7F1 635 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Clic6Q8BHB9 596 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 HlfQ8BW74 295 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Kcnb2A6H8H5 907 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Apol7aB2RT54 418 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Tex13cD3YU32 604 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Zfp213E9QAW0 468 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Eef2kO08796 724 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 FosP01101 380 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Sema3eP70275 775 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 DSCC1Q14AI0 399 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Ctr9Q62018 1173 aaKnown RBP13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Swap70Q6A028 585 aaKnown RBP13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Klhl20Q8VCK5 604 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Cyp2c68K7N6C2 491 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Nmt2O70311 529 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Tmed8Q3UHI4 326 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Nsrp1Q5NCR9 542 aa13.21□□□□□ -0.29
Pcif1-201ENSMUST00000041643 Cyp3a59D3Z2W7 503 aa13.21□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Pde1cQ64338 706 aa13.21□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Fam196bQ6GQV1 535 aa13.21□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Usp44Q8C2S0 711 aa13.21□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Ces1dQ8VCT4 565 aa13.21□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Rnaseh2aQ9CWY8 301 aa13.21□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Nr2e3Q9QXZ7 395 aa13.21□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Bcl9Q9D219 1425 aa13.21□□□□□ -0.3
Pcif1-201ENSMUST00000041643 E9QMW4 1145 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Usp28Q5I043 1051 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Lrit1Q8K099 624 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Defb15Q8R2I5 79 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Sf3b3Q921M3 1217 aaKnown RBP13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Slc4a1P04919 929 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Ftl1P29391 183 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Traf5P70191 558 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Qrich1Q3UA37 777 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 PigsQ6PD26 555 aaKnown RBP13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 LdhdQ7TNG8 484 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Zswim4Q8C7B8 1101 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Tubb4aQ9D6F9 444 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 DohhA0A1Y7VJ29 135 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Dnm2P39054 870 aaKnown RBP13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Tnni3P48787 211 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Rgl1Q60695 768 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Lrsam1Q80ZI6 727 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Slc17a8Q8BFU8 601 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Hsf2bpQ9D4G2 338 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Map3k15A2AQW0 1331 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Rsph10bE9PYQ0 876 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Diaph1O08808 1255 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Gse1Q3U3C9 1213 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 TbcbQ9D1E6 244 aa13.2□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Znf568E9PYI1 671 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Cct6aP80317 531 aaKnown RBP13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 GlyctkQ8QZY2 523 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Tmco5aQ9D9D5 303 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 C87499Q3UX49 493 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Prm3Q62100 101 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Fmnl3Q6ZPF4 1028 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 EngaseQ8BX80 734 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Mknk2Q8CDB0 459 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Kdm8Q9CXT6 414 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Acot3Q9QYR7 432 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Mx2Q9WVP9 655 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Frmpd4A2AFR3 1320 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Scg2Q03517 617 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Trpc3Q9QZC1 836 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Zscan25B2RX31 543 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Tlr8P58682 1032 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Zfp781Q0P5U5 243 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Sv2cQ69ZS6 727 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Gpr101Q80T62 511 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Maip1Q8BHE8 291 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Rasgrp4Q8BTM9 673 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Serpinb3bQ9D1Q5 387 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Krt34Q9D646 392 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Crb1Q8VHS2 1405 aa13.19□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Skor2A7M7C7 1008 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Mroh8E9PYI4 1049 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Senp6Q6P7W0 1132 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Mei1Q9D4I2 1268 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Kif20bQ80WE4 1774 aaKnown RBP13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Lrrc32G3XA59 663 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Rnaseh1O70338 285 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Axin2O88566 840 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Elf1Q60775 612 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Dync1li2Q6PDL0 492 aaKnown RBP13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Dcaf15Q6PFH3 600 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Ubxn1Q922Y1 297 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Ubxn2aQ99KJ0 258 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Spata31d1bE9QA57 1361 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Mst1rQ62190 1378 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Npy5rO70342 466 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Pcdha4O88689 947 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Cd22P35329 862 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Ripply1Q2WG77 201 aa13.18□□□□□ -0.3
Pcif1-201ENSMUST00000041643 Map10Q8BJS7 891 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms