RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Znf335A2A5K6 1337 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Scgb2b7D3YYY1 112 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 G3bp2P97379 482 aaKnown RBP6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 HmmrQ00547 794 aaKnown RBP6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Trmt1Q3TX08 663 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Cep131Q62036 1060 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Sorbs1Q62417 1290 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Ltv1Q6NSQ7 470 aaKnown RBP6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Ppp4r3aQ6P2K6 820 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Clec16aQ80U30 1036 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Cyp2d12Q8BVD2 504 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Mb21d2Q8C525 428 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 DymQ8CHY3 669 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Spata2Q8K004 515 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Gtpbp10Q8K013 366 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Mmgt1Q8K273 131 aaKnown RBP6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Shtn1Q8K2Q9 631 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Psmd2Q8VDM4 908 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Speer4bQ9D9F7 267 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Copb1Q9JIF7 953 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 MefvQ9JJ26 767 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Abt1Q9QYL7 269 aaKnown RBP6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Coro1cQ9WUM4 474 aa6.33□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Mroh1E0CZ22 1640 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Itga9B8JK39 1036 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Vmn2r23E9PXI5 849 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Kif23E9Q5G3 953 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Scgb2b19J3QM75 112 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Ncf2O70145 525 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Dnm2P39054 870 aaKnown RBP6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Hspd1P63038 573 aaKnown RBP6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Luc7l3Q5SUF2 432 aaKnown RBP6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 PapolaQ61183 739 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Cd37Q61470 281 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Asic3Q6X1Y6 530 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Cyp4f39Q8BGU0 532 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Cep128Q8BI22 1102 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Wdr35Q8BND3 1181 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Armcx6Q8K3A6 301 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Mphosph6Q9D1Q1 161 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Cfap53Q9D439 514 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 UvssaQ9D479 717 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Bcl9Q9D219 1425 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Ccdc170D3YXL0 722 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Akr1b10G5E895 316 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Krt8P11679 490 aaKnown RBP6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Tcp1P11983 556 aaKnown RBP6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Ighmbp2P40694 993 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Meis3P97368 378 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Rc3h1Q4VGL6 1130 aaKnown RBP6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Prl2c1Q5SVL9 228 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 DbnlQ62418 436 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Rbm12b2Q66JV4 834 aaKnown RBP6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Vps37dQ810I0 261 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Ccdc172Q810N9 267 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Ublcp1Q8BGR9 318 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Usp20Q8C6M1 916 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 ImmtQ8CAQ8 757 aaKnown RBP6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Rbm17Q8JZX4 405 aaKnown RBP6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 OplahQ8K010 1288 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Pcdha12Q91Y18 950 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Abcf2Q99LE6 628 aaKnown RBP6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Tsnaxip1Q99P25 704 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Bcl11bQ99PV8 884 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Lmbr1lQ9D1E5 489 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Nsmce1Q9D720 266 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Ercc4Q9QZD4 917 aa6.32□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Gm28360A0A087WR25 190 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Scgb2b11A0A087WR49 112 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Klc1O88447 541 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Chmp6P0C0A3 200 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Kif5aP33175 1027 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Casp4P70343 373 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Eya1P97767 591 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Flt3Q00342 1000 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Ccdc110Q3V125 848 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Rgl2Q61193 778 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Cnga2Q62398 664 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Ggt6Q6PDE7 497 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Stk38lQ7TSE6 464 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Ccdc50Q810U5 305 aaKnown RBP6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 HhatQ8BMT9 499 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Itga2bQ9QUM0 1033 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Sik3Q6P4S6 1311 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Prrc2bQ7TPM1 1486 aaKnown RBP6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Mst1rQ62190 1378 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 4932429P05RikA2ADI4 785 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Atp8b5A3FIN4 1183 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Apba1B2RUJ5 842 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Acad12D3Z7X0 555 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Gm10378F6XQQ1 160 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Samd15F6XZJ7 620 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Gm5814J3QP80 125 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Gap43P06837 227 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Ctnna1P26231 906 aaKnown RBP6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 GpkowQ56A08 488 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Olfr121Q5CZY0 321 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Lrrcc1Q69ZB0 1026 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 Cnot10Q8BH15 744 aa6.31□□□□□ -1.4
Rc3h1-201ENSMUST00000035911 MtrrQ8C1A3 696 aa6.31□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms