RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Ccdc42Q5SV66 316 aa13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Ddx3yQ62095 658 aaKnown RBP13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Edrf1Q6GQV7 1239 aa13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Adam6bQ6IMH7 756 aa13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Slc39a6Q8C145 765 aa13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Morc2bQ8C5W4 1022 aa13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Fam161bQ8CB59 589 aa13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Myh6Q02566 1938 aaKnown RBP13.54□□□□□ -0.24
Ufd1-201ENSMUST00000005394 MetP16056 1379 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Speer4f2E9Q366 295 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Ube3aO08759 870 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Il27raO70394 623 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 IkbkbO88351 757 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Il7P10168 154 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Cyp2d9P11714 504 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 PrphP15331 475 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Cnnm2Q3TWN3 875 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Usp49Q6P9L4 685 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Tacc1Q6Y685 774 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Rassf10Q8BL43 508 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Hps6Q8BLY7 805 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Dclk3Q8BWQ5 790 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Lrrd1Q8C0R9 853 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 MtrrQ8C1A3 696 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Dbndd2Q9CRD4 158 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Fam213aQ9CYH2 218 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Stag1Q9D3E6 1258 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Sil1Q9EPK6 465 aa13.53□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Gm5580A0A0N4SVP8 411 aa13.52□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Prdm1Q60636 856 aa13.52□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Ppp2r5bQ6PD28 497 aa13.52□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Ythdf3Q8BYK6 585 aaKnown RBP13.52□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Rtn1Q8K0T0 780 aa13.52□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Eif3hQ91WK2 352 aaKnown RBP13.52□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Riok1Q922Q2 567 aa13.52□□□□□ -0.24
Ufd1-201ENSMUST00000005394 PigbQ9JJQ0 542 aa13.52□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Knop1Q9Z2Q2 478 aaKnown RBP13.52□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Mast3Q3U214 1321 aa13.52□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Ecm29Q6PDI5 1840 aa13.52□□□□□ -0.24
Ufd1-201ENSMUST00000005394 Pla2g4aP47713 748 aa13.52□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Ccdc174Q3U155 467 aa13.52□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Bbof1Q3V079 533 aa13.52□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Tmem232Q5K6N0 675 aa13.52□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Ccdc157Q5SPX1 718 aa13.52□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Maip1Q8BHE8 291 aa13.52□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Zc3h6Q8BYK8 1177 aa13.52□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Kif2bQ8C0N1 668 aa13.52□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Usp27Q8CEG8 438 aa13.52□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Gle1Q8R322 699 aa13.52□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Pcdha12Q91Y18 950 aa13.52□□□□□ -0.25
Ufd1-201ENSMUST00000005394 RtcbQ99LF4 505 aaKnown RBP13.52□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Tmem39aQ9CYC3 486 aa13.52□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Cnpy3Q9DAU1 276 aa13.52□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Zswim8Q3UHH1 1832 aaKnown RBP13.52□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Arap2Q8BZ05 1703 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Sec14l1A8Y5H7 715 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Chp1P61022 195 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Tmtc1Q3UV71 942 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Tas2r124Q7M718 309 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Camsap3Q80VC9 1252 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Q8VDP2 222 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Rab3il1Q8VDV3 383 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Txndc5Q91W90 417 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Gps2Q921N8 327 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 EpgnQ924X1 152 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Tab2Q99K90 693 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Actn2Q9JI91 894 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Stk39Q9Z1W9 556 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Myh13B1AR69 1938 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Myd88P22366 296 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Pth1rP41593 591 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Pde4dQ01063 747 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Mindy1Q76LS9 468 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Ctdp1Q7TSG2 960 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Clic6Q8BHB9 596 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Kcnj14Q8JZN3 434 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Cdk17Q8K0D0 523 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 E2f4Q8R0K9 410 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Hexim1Q8R409 356 aaKnown RBP13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Usp15Q8R5H1 981 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Apopt1Q9CQW7 192 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Mrps25Q9D125 171 aaKnown RBP13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Calml3Q9D6P8 149 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Ltb4r2Q9JJL9 360 aa13.51□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Sned1Q70E20 1403 aa13.5□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Pak1O88643 545 aa13.5□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Atp6v1aP50516 617 aaKnown RBP13.5□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Serpinb6dQ3UWK8 375 aa13.5□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Slc27a1Q60714 646 aa13.5□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Ddx3xQ62167 662 aaKnown RBP13.5□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Tmem192Q9CXT7 266 aa13.5□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Eif4enif1Q9EST3 983 aaKnown RBP13.5□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Myh1Q5SX40 1942 aa13.49□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Pnpla6Q3TRM4 1355 aa13.49□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Zfp853A0A1D5RM95 733 aa13.49□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Speer4aF8VPX6 267 aa13.49□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Cyp3a25O09158 503 aa13.49□□□□□ -0.25
Ufd1-201ENSMUST00000005394 Magea6O89010 325 aa13.49□□□□□ -0.25
Ufd1-201ENSMUST00000005394 MybP06876 636 aa13.49□□□□□ -0.25
Ufd1-201ENSMUST00000005394 CalrP14211 416 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms